RNA–Protein interactions for RNA: ENST00000619079.1

UPF3A-212, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 2

Gene UPF3A, Length 2,423 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-212ENST00000619079 SPENQ96T58 3664 aaKnown RBP8.74□□□□□ -1.01
UPF3A-212ENST00000619079 PPIAL4CA0A0B4J2A2 164 aa8.74□□□□□ -1.01
UPF3A-212ENST00000619079 PINLYPA6NC86 204 aa8.74□□□□□ -1.01
UPF3A-212ENST00000619079 PRSS47A8MTI9 375 aa8.74□□□□□ -1.01
UPF3A-212ENST00000619079 MGST3O14880 152 aa8.74□□□□□ -1.01
UPF3A-212ENST00000619079 SLC25A5P05141 298 aaKnown RBP8.74□□□□□ -1.01
UPF3A-212ENST00000619079 LGALS9BQ3B8N2 356 aa8.74□□□□□ -1.01
UPF3A-212ENST00000619079 PSMG4Q5JS54 123 aa8.74□□□□□ -1.01
UPF3A-212ENST00000619079 LGALS9CQ6DKI2 356 aa8.74□□□□□ -1.01
UPF3A-212ENST00000619079 CXorf67Q86X51 503 aaPredicted RBP8.74□□□□□ -1.01
UPF3A-212ENST00000619079 FAM222BQ8WU58 562 aa8.74□□□□□ -1.01
UPF3A-212ENST00000619079 FXYD5Q96DB9 178 aa8.74□□□□□ -1.01
UPF3A-212ENST00000619079 FAM173AQ9BQD7 235 aa8.74□□□□□ -1.01
UPF3A-212ENST00000619079 DCTN5Q9BTE1 182 aa8.74□□□□□ -1.01
UPF3A-212ENST00000619079 TRAV17A0A0B4J275 112 aa8.73□□□□□ -1.01
UPF3A-212ENST00000619079 A0A1B0GW15 77 aa8.73□□□□□ -1.01
UPF3A-212ENST00000619079 ZNF137PP52743 207 aa8.73□□□□□ -1.01
UPF3A-212ENST00000619079 LOXL3P58215 753 aa8.73□□□□□ -1.01
UPF3A-212ENST00000619079 ALKBH6Q3KRA9 238 aa8.73□□□□□ -1.01
UPF3A-212ENST00000619079 CD300EQ496F6 205 aaPredicted RBP8.73□□□□□ -1.01
UPF3A-212ENST00000619079 MORN5Q5VZ52 161 aa8.73□□□□□ -1.01
UPF3A-212ENST00000619079 IGFL2Q6UWQ7 119 aa8.73□□□□□ -1.01
UPF3A-212ENST00000619079 ADAMTSL5Q6ZMM2 481 aa8.73□□□□□ -1.01
UPF3A-212ENST00000619079 RPRMLQ8N4K4 120 aa8.73□□□□□ -1.01
UPF3A-212ENST00000619079 OR2Z1Q8NG97 314 aa8.73□□□□□ -1.01
UPF3A-212ENST00000619079 PLPPR2Q96GM1 343 aa8.73□□□□□ -1.01
UPF3A-212ENST00000619079 HES7Q9BYE0 225 aa8.73□□□□□ -1.01
UPF3A-212ENST00000619079 METRNQ9UJH8 293 aa8.73□□□□□ -1.01
UPF3A-212ENST00000619079 HILPDAQ9Y5L2 63 aa8.73□□□□□ -1.01
UPF3A-212ENST00000619079 UPK2O00526 184 aa8.73□□□□□ -1.01
UPF3A-212ENST00000619079 LTAP01374 205 aa8.73□□□□□ -1.01
UPF3A-212ENST00000619079 APOHP02749 345 aaPredicted RBP8.73□□□□□ -1.01
UPF3A-212ENST00000619079 RNASE2P10153 161 aaKnown RBP8.73□□□□□ -1.01
UPF3A-212ENST00000619079 PRDX2P32119 198 aa8.73□□□□□ -1.01
UPF3A-212ENST00000619079 SAMD5Q5TGI4 173 aa8.73□□□□□ -1.01
UPF3A-212ENST00000619079 IGFL3Q6UXB1 125 aa8.73□□□□□ -1.01
UPF3A-212ENST00000619079 BHLHA15Q7RTS1 189 aaPredicted RBP8.73□□□□□ -1.01
UPF3A-212ENST00000619079 TMEM178AQ8NBL3 297 aa8.73□□□□□ -1.01
UPF3A-212ENST00000619079 GTSF1LQ9H1H1 148 aa8.73□□□□□ -1.01
UPF3A-212ENST00000619079 TEX48A0A1B0GUV7 120 aa8.72□□□□□ -1.01
UPF3A-212ENST00000619079 NPIPB6E9PJ23 425 aa8.72□□□□□ -1.01
UPF3A-212ENST00000619079 SMIM13P0DJ93 91 aa8.72□□□□□ -1.01
UPF3A-212ENST00000619079 CD24P25063 80 aa8.72□□□□□ -1.01
UPF3A-212ENST00000619079 ZNF134P52741 427 aa8.72□□□□□ -1.01
UPF3A-212ENST00000619079 ZNF138P52744 262 aa8.72□□□□□ -1.01
UPF3A-212ENST00000619079 GNG5P63218 68 aa8.72□□□□□ -1.01
UPF3A-212ENST00000619079 SMAGPQ0VAQ4 97 aa8.72□□□□□ -1.01
UPF3A-212ENST00000619079 SCGB2A2Q13296 93 aa8.72□□□□□ -1.01
UPF3A-212ENST00000619079 SLC25A48Q6ZT89 311 aaKnown RBP8.72□□□□□ -1.01
UPF3A-212ENST00000619079 RBMXL3Q8N7X1 1067 aaKnown RBP8.72□□□□□ -1.01
UPF3A-212ENST00000619079 OR5AN1Q8NGI8 311 aa8.72□□□□□ -1.01
UPF3A-212ENST00000619079 PRSS3P2Q8NHM4 247 aa8.72□□□□□ -1.01
UPF3A-212ENST00000619079 PERPQ96FX8 193 aa8.72□□□□□ -1.01
UPF3A-212ENST00000619079 CLUHP3Q96NS8 147 aa8.72□□□□□ -1.01
UPF3A-212ENST00000619079 THYN1Q9P016 225 aa8.72□□□□□ -1.01
UPF3A-212ENST00000619079 TIMM8BQ9Y5J9 83 aaPredicted RBP8.72□□□□□ -1.01
UPF3A-212ENST00000619079 SPTA1P02549 2419 aa8.72□□□□□ -1.01
UPF3A-212ENST00000619079 PPIAL4EA0A075B759 164 aa8.72□□□□□ -1.01
UPF3A-212ENST00000619079 ZNF207O43670 478 aaKnown RBP8.72□□□□□ -1.01
UPF3A-212ENST00000619079 MOSP00540 346 aa8.72□□□□□ -1.01
UPF3A-212ENST00000619079 CSN3P07498 182 aa8.72□□□□□ -1.01
UPF3A-212ENST00000619079 PPIAL4FP0DN26 164 aa8.72□□□□□ -1.01
UPF3A-212ENST00000619079 MZT1Q08AG7 82 aa8.72□□□□□ -1.01
UPF3A-212ENST00000619079 RIGQ13278 110 aa8.72□□□□□ -1.01
UPF3A-212ENST00000619079 CD177Q8N6Q3 437 aa8.72□□□□□ -1.01
UPF3A-212ENST00000619079 KLF14Q8TD94 323 aaPredicted RBP8.72□□□□□ -1.01
UPF3A-212ENST00000619079 RAB37Q96AX2 223 aa8.72□□□□□ -1.01
UPF3A-212ENST00000619079 KLF13Q9Y2Y9 288 aaPredicted RBP8.72□□□□□ -1.01
UPF3A-212ENST00000619079 GAGE12HA6NDE8 117 aa8.71□□□□□ -1.01
UPF3A-212ENST00000619079 TFF1P04155 84 aa8.71□□□□□ -1.01
UPF3A-212ENST00000619079 SAA2P0DJI9 122 aaPredicted RBP8.71□□□□□ -1.01
UPF3A-212ENST00000619079 CT45A6P0DMU7 189 aa8.71□□□□□ -1.01
UPF3A-212ENST00000619079 CT45A5P0DMU8 189 aa8.71□□□□□ -1.01
UPF3A-212ENST00000619079 CT45A10P0DMU9 189 aa8.71□□□□□ -1.01
UPF3A-212ENST00000619079 CT45A7P0DMV0 189 aa8.71□□□□□ -1.01
UPF3A-212ENST00000619079 MPV17P39210 176 aa8.71□□□□□ -1.01
UPF3A-212ENST00000619079 CT45A1Q5HYN5 189 aa8.71□□□□□ -1.01
UPF3A-212ENST00000619079 FOXI2Q6ZQN5 318 aa8.71□□□□□ -1.01
UPF3A-212ENST00000619079 Q6ZS92 163 aa8.71□□□□□ -1.01
UPF3A-212ENST00000619079 GATD1Q8NB37 220 aa8.71□□□□□ -1.01
UPF3A-212ENST00000619079 MDS2Q8NDY4 140 aa8.71□□□□□ -1.01
UPF3A-212ENST00000619079 CT45A3Q8NHU0 189 aa8.71□□□□□ -1.01
UPF3A-212ENST00000619079 NAA38Q9BRA0 125 aaKnown RBP8.71□□□□□ -1.01
UPF3A-212ENST00000619079 A0A1B0GUT8 65 aa8.71□□□□□ -1.02
UPF3A-212ENST00000619079 TCRBV4S1A1TA0A5B7 111 aa8.71□□□□□ -1.02
UPF3A-212ENST00000619079 PGPA6NDG6 321 aa8.71□□□□□ -1.02
UPF3A-212ENST00000619079 KLRC4-KLRK1H3BQV0 150 aa8.71□□□□□ -1.02
UPF3A-212ENST00000619079 COL8A1P27658 744 aa8.71□□□□□ -1.02
UPF3A-212ENST00000619079 ERHP84090 104 aaKnown RBP8.71□□□□□ -1.02
UPF3A-212ENST00000619079 KLRB1Q12918 225 aa8.71□□□□□ -1.02
UPF3A-212ENST00000619079 FOXE3Q13461 319 aa8.71□□□□□ -1.02
UPF3A-212ENST00000619079 GCSAMQ8N6F7 178 aa8.71□□□□□ -1.02
UPF3A-212ENST00000619079 TMEM190Q8WZ59 177 aa8.71□□□□□ -1.02
UPF3A-212ENST00000619079 C12orf49Q9H741 205 aa8.71□□□□□ -1.02
UPF3A-212ENST00000619079 CALYQ9NYX4 217 aa8.71□□□□□ -1.02
UPF3A-212ENST00000619079 SIGLEC8Q9NYZ4 499 aa8.71□□□□□ -1.02
UPF3A-212ENST00000619079 ATRXP46100 2492 aa8.71□□□□□ -1.02
UPF3A-212ENST00000619079 F8W1H4 67 aa8.7□□□□□ -1.02
UPF3A-212ENST00000619079 NCR2O95944 276 aa8.7□□□□□ -1.02
UPF3A-212ENST00000619079 IGHV3-7P01780 117 aa8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 65.4 ms