RNA–Protein interactions for RNA: ENST00000618500.4

SNCA-213, Transcript of synuclein alpha, humanhuman

TSL 1 (best) BASIC

Gene SNCA, Length 3,022 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-213ENST00000618500 OR1B1Q8NGR6 318 aa3.09□□□□□ -1.91
SNCA-213ENST00000618500 SLC35B3Q9H1N7 401 aa3.09□□□□□ -1.91
SNCA-213ENST00000618500 ATG5Q9H1Y0 275 aa3.09□□□□□ -1.91
SNCA-213ENST00000618500 DIABLOQ9NR28 239 aa3.09□□□□□ -1.91
SNCA-213ENST00000618500 NDUFB11Q9NX14 153 aa3.09□□□□□ -1.91
SNCA-213ENST00000618500 MSRB1Q9NZV6 116 aa3.09□□□□□ -1.91
SNCA-213ENST00000618500 IGHV3-66A0A0C4DH42 116 aa3.09□□□□□ -1.92
SNCA-213ENST00000618500 TNFSF12O43508 249 aa3.09□□□□□ -1.92
SNCA-213ENST00000618500 IGKV1-39P01597 117 aa3.09□□□□□ -1.92
SNCA-213ENST00000618500 IGKV1D-39P04432 117 aa3.09□□□□□ -1.92
SNCA-213ENST00000618500 RAB3BP20337 219 aa3.09□□□□□ -1.92
SNCA-213ENST00000618500 OR10J1P30954 320 aa3.09□□□□□ -1.92
SNCA-213ENST00000618500 OR10A3P58181 314 aa3.09□□□□□ -1.92
SNCA-213ENST00000618500 FABP5Q01469 135 aa3.09□□□□□ -1.92
SNCA-213ENST00000618500 SLAQ13239 276 aa3.09□□□□□ -1.92
SNCA-213ENST00000618500 IDNKQ5T6J7 187 aa3.09□□□□□ -1.92
SNCA-213ENST00000618500 HES5Q5TA89 166 aa3.09□□□□□ -1.92
SNCA-213ENST00000618500 Q6ZRU5 148 aa3.09□□□□□ -1.92
SNCA-213ENST00000618500 H2BFWTQ7Z2G1 175 aa3.09□□□□□ -1.92
SNCA-213ENST00000618500 SLC35G3Q8N808 338 aa3.09□□□□□ -1.92
SNCA-213ENST00000618500 RAB24Q969Q5 203 aa3.09□□□□□ -1.92
SNCA-213ENST00000618500 GPR146Q96CH1 333 aa3.09□□□□□ -1.92
SNCA-213ENST00000618500 S100A14Q9HCY8 104 aa3.09□□□□□ -1.92
SNCA-213ENST00000618500 RNF213Q63HN8 5207 aa3.08□□□□□ -1.92
SNCA-213ENST00000618500 IGHV3OR16-13A0A075B7E8 117 aa3.08□□□□□ -1.92
SNCA-213ENST00000618500 IGHV3-74A0A0B4J1X5 117 aa3.08□□□□□ -1.92
SNCA-213ENST00000618500 PNMA8CA0A1B0GUJ8 204 aa3.08□□□□□ -1.92
SNCA-213ENST00000618500 PPP5CP53041 499 aa3.08□□□□□ -1.92
SNCA-213ENST00000618500 EMP1P54849 157 aa3.08□□□□□ -1.92
SNCA-213ENST00000618500 NMSQ5H8A3 153 aa3.08□□□□□ -1.92
SNCA-213ENST00000618500 MORN5Q5VZ52 161 aa3.08□□□□□ -1.92
SNCA-213ENST00000618500 FCAMRQ8WWV6 532 aa3.08□□□□□ -1.92
SNCA-213ENST00000618500 PYDC1Q8WXC3 89 aa3.08□□□□□ -1.92
SNCA-213ENST00000618500 MRPL36Q9P0J6 103 aaKnown RBP3.08□□□□□ -1.92
SNCA-213ENST00000618500 KLK11Q9UBX7 282 aa3.08□□□□□ -1.92
SNCA-213ENST00000618500 H7BYZ3 331 aa3.08□□□□□ -1.92
SNCA-213ENST00000618500 NXPH4O95158 308 aa3.08□□□□□ -1.92
SNCA-213ENST00000618500 RLN1P04808 185 aa3.08□□□□□ -1.92
SNCA-213ENST00000618500 MT1HL1P0DM35 61 aa3.08□□□□□ -1.92
SNCA-213ENST00000618500 HOXA5P20719 270 aa3.08□□□□□ -1.92
SNCA-213ENST00000618500 GPX4P36969 197 aaPredicted RBP3.08□□□□□ -1.92
SNCA-213ENST00000618500 CLDN12P56749 244 aa3.08□□□□□ -1.92
SNCA-213ENST00000618500 SPCS3P61009 180 aa3.08□□□□□ -1.92
SNCA-213ENST00000618500 FAM78BQ5VT40 261 aa3.08□□□□□ -1.92
SNCA-213ENST00000618500 AHSA2Q719I0 299 aa3.08□□□□□ -1.92
SNCA-213ENST00000618500 DHRSXQ8N5I4 330 aa3.08□□□□□ -1.92
SNCA-213ENST00000618500 BPIFB6Q8NFQ5 453 aa3.08□□□□□ -1.92
SNCA-213ENST00000618500 TSPAN14Q8NG11 270 aa3.08□□□□□ -1.92
SNCA-213ENST00000618500 OR51G1Q8NGK1 321 aa3.08□□□□□ -1.92
SNCA-213ENST00000618500 COQ8AQ8NI60 647 aa3.08□□□□□ -1.92
SNCA-213ENST00000618500 NUDCD2Q8WVJ2 157 aa3.08□□□□□ -1.92
SNCA-213ENST00000618500 DUSP21Q9H596 190 aa3.08□□□□□ -1.92
SNCA-213ENST00000618500 SNCAP37840 140 aa3.07□□□□□ -1.92
SNCA-213ENST00000618500 LAGE3Q14657 143 aa3.07□□□□□ -1.92
SNCA-213ENST00000618500 THAP8Q8NA92 274 aa3.07□□□□□ -1.92
SNCA-213ENST00000618500 AUNIPQ9H7T9 357 aa3.07□□□□□ -1.92
SNCA-213ENST00000618500 RNF24Q9Y225 148 aa3.07□□□□□ -1.92
SNCA-213ENST00000618500 ICOSQ9Y6W8 199 aa3.07□□□□□ -1.92
SNCA-213ENST00000618500 TRAV26-1A0A087WT03 109 aa3.07□□□□□ -1.92
SNCA-213ENST00000618500 TMEM235A6NFC5 223 aa3.07□□□□□ -1.92
SNCA-213ENST00000618500 ZNF705GA8MUZ8 300 aaPredicted RBP3.07□□□□□ -1.92
SNCA-213ENST00000618500 KRASP01116 189 aa3.07□□□□□ -1.92
SNCA-213ENST00000618500 OPRK1P41145 380 aa3.07□□□□□ -1.92
SNCA-213ENST00000618500 DHODHQ02127 395 aa3.07□□□□□ -1.92
SNCA-213ENST00000618500 PRSS54Q6PEW0 395 aa3.07□□□□□ -1.92
SNCA-213ENST00000618500 SH2D6Q7Z4S9 175 aa3.07□□□□□ -1.92
SNCA-213ENST00000618500 TMEM144Q7Z5S9 345 aa3.07□□□□□ -1.92
SNCA-213ENST00000618500 ZNF680Q8NEM1 530 aa3.07□□□□□ -1.92
SNCA-213ENST00000618500 VSIG2Q96IQ7 327 aa3.07□□□□□ -1.92
SNCA-213ENST00000618500 TRGV9Q99603 122 aa3.07□□□□□ -1.92
SNCA-213ENST00000618500 ELF5Q9UKW6 265 aaPredicted RBP3.07□□□□□ -1.92
SNCA-213ENST00000618500 TP53TG3Q9ULZ0 132 aa3.07□□□□□ -1.92
SNCA-213ENST00000618500 ZNF98A6NK75 572 aa3.06□□□□□ -1.92
SNCA-213ENST00000618500 RS1O15537 224 aa3.06□□□□□ -1.92
SNCA-213ENST00000618500 SMR3BP02814 79 aaPredicted RBP3.06□□□□□ -1.92
SNCA-213ENST00000618500 IL4P05112 153 aa3.06□□□□□ -1.92
SNCA-213ENST00000618500 RD3LP0DJH9 198 aa3.06□□□□□ -1.92
SNCA-213ENST00000618500 PRSS48Q7RTY5 328 aa3.06□□□□□ -1.92
SNCA-213ENST00000618500 PINX1Q96BK5 328 aaKnown RBP3.06□□□□□ -1.92
SNCA-213ENST00000618500 C20orf173Q96LM9 149 aa3.06□□□□□ -1.92
SNCA-213ENST00000618500 PAXXQ9BUH6 204 aa3.06□□□□□ -1.92
SNCA-213ENST00000618500 HINT2Q9BX68 163 aa3.06□□□□□ -1.92
SNCA-213ENST00000618500 ENY2Q9NPA8 101 aa3.06□□□□□ -1.92
SNCA-213ENST00000618500 LY96Q9Y6Y9 160 aa3.06□□□□□ -1.92
SNCA-213ENST00000618500 IGKV1-5P01602 117 aa3.06□□□□□ -1.92
SNCA-213ENST00000618500 RLN2P04090 185 aa3.06□□□□□ -1.92
SNCA-213ENST00000618500 GALR1P47211 349 aa3.06□□□□□ -1.92
SNCA-213ENST00000618500 ANXA2RQ3ZCQ2 193 aa3.06□□□□□ -1.92
SNCA-213ENST00000618500 GPR107Q5VW38 600 aa3.06□□□□□ -1.92
SNCA-213ENST00000618500 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa3.06□□□□□ -1.92
SNCA-213ENST00000618500 TBC1D26Q86UD7 250 aa3.06□□□□□ -1.92
SNCA-213ENST00000618500 ZBTB8BQ8NAP8 495 aaPredicted RBP3.06□□□□□ -1.92
SNCA-213ENST00000618500 SLC25A38Q96DW6 304 aa3.06□□□□□ -1.92
SNCA-213ENST00000618500 PDCD10Q9BUL8 212 aa3.06□□□□□ -1.92
SNCA-213ENST00000618500 RHBDL2Q9NX52 303 aa3.06□□□□□ -1.92
SNCA-213ENST00000618500 SCN3BQ9NY72 215 aa3.06□□□□□ -1.92
SNCA-213ENST00000618500 NSG2Q9Y328 171 aa3.06□□□□□ -1.92
SNCA-213ENST00000618500 TPRKBQ9Y3C4 175 aa3.06□□□□□ -1.92
SNCA-213ENST00000618500 IGHV3OR16-12A0A075B7B8 117 aa3.06□□□□□ -1.92
SNCA-213ENST00000618500 IBA57-AS1B1ANH7 110 aa3.06□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms