RNA–Protein interactions for RNA: ENST00000615606.4

CLTCL1-208, Transcript of clathrin heavy chain like 1, humanhuman

TSL 1 (best)

Gene CLTCL1, Length 4,994 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-208ENST00000615606 CCL20P78556 96 aa7.64□□□□□ -1.19
CLTCL1-208ENST00000615606 WFDC1Q9HC57 220 aa7.64□□□□□ -1.19
CLTCL1-208ENST00000615606 PAPPA-AS1Q5QFB9 102 aa7.63□□□□□ -1.19
CLTCL1-208ENST00000615606 GLMPQ8WWB7 406 aa7.63□□□□□ -1.19
CLTCL1-208ENST00000615606 PSG8Q9UQ74 426 aa7.63□□□□□ -1.19
CLTCL1-208ENST00000615606 TNFRSF18Q9Y5U5 241 aa7.63□□□□□ -1.19
CLTCL1-208ENST00000615606 PTPRSQ13332 1948 aa7.63□□□□□ -1.19
CLTCL1-208ENST00000615606 TRBV20OR9-2A0A075B6H5 130 aa7.63□□□□□ -1.19
CLTCL1-208ENST00000615606 A0A1W2PPI3 338 aa7.63□□□□□ -1.19
CLTCL1-208ENST00000615606 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP7.63□□□□□ -1.19
CLTCL1-208ENST00000615606 FGF16O43320 207 aa7.63□□□□□ -1.19
CLTCL1-208ENST00000615606 LEPROTL1O95214 131 aa7.63□□□□□ -1.19
CLTCL1-208ENST00000615606 TOMM40O96008 361 aa7.63□□□□□ -1.19
CLTCL1-208ENST00000615606 FER1L6-AS1Q8NA97 138 aa7.63□□□□□ -1.19
CLTCL1-208ENST00000615606 Q8NFD4 153 aa7.63□□□□□ -1.19
CLTCL1-208ENST00000615606 MBD3L1Q8WWY6 194 aa7.63□□□□□ -1.19
CLTCL1-208ENST00000615606 ALPK3Q96L96 1907 aa7.63□□□□□ -1.19
CLTCL1-208ENST00000615606 TMEM131Q92545 1883 aa7.63□□□□□ -1.19
CLTCL1-208ENST00000615606 A0A1B0GUT8 65 aa7.63□□□□□ -1.19
CLTCL1-208ENST00000615606 M0R3E3 92 aa7.63□□□□□ -1.19
CLTCL1-208ENST00000615606 CDX1P47902 265 aaPredicted RBP7.63□□□□□ -1.19
CLTCL1-208ENST00000615606 GNG5P63218 68 aa7.63□□□□□ -1.19
CLTCL1-208ENST00000615606 MUC22E2RYF6 1773 aaPredicted RBP7.63□□□□□ -1.19
CLTCL1-208ENST00000615606 C22orf46C9J442 243 aa7.63□□□□□ -1.19
CLTCL1-208ENST00000615606 PMCHL1Q16048 86 aa7.63□□□□□ -1.19
CLTCL1-208ENST00000615606 SPATA45Q537H7 98 aa7.63□□□□□ -1.19
CLTCL1-208ENST00000615606 C11orf53Q8IXP5 236 aa7.63□□□□□ -1.19
CLTCL1-208ENST00000615606 C8orf31Q8N9H6 132 aa7.63□□□□□ -1.19
CLTCL1-208ENST00000615606 IL36BQ9NZH7 164 aa7.63□□□□□ -1.19
CLTCL1-208ENST00000615606 WNK2Q9Y3S1 2297 aa7.63□□□□□ -1.19
CLTCL1-208ENST00000615606 TRGV11A0A075B6L2 103 aa7.62□□□□□ -1.19
CLTCL1-208ENST00000615606 C15orf62A8K5M9 175 aa7.62□□□□□ -1.19
CLTCL1-208ENST00000615606 STAG3L3P0CL85 134 aa7.62□□□□□ -1.19
CLTCL1-208ENST00000615606 GCSHP23434 173 aa7.62□□□□□ -1.19
CLTCL1-208ENST00000615606 SRIP30626 198 aa7.62□□□□□ -1.19
CLTCL1-208ENST00000615606 EMP1P54849 157 aa7.62□□□□□ -1.19
CLTCL1-208ENST00000615606 RPL15P61313 204 aaKnown RBP7.62□□□□□ -1.19
CLTCL1-208ENST00000615606 ZNF502Q8TBZ5 544 aa7.62□□□□□ -1.19
CLTCL1-208ENST00000615606 MGST2Q99735 147 aa7.62□□□□□ -1.19
CLTCL1-208ENST00000615606 PTPRQQ9UMZ3 2332 aa7.62□□□□□ -1.19
CLTCL1-208ENST00000615606 DMRT1Q9Y5R6 373 aa7.62□□□□□ -1.19
CLTCL1-208ENST00000615606 IGHV4-39P01824 125 aa7.62□□□□□ -1.19
CLTCL1-208ENST00000615606 CD7P09564 240 aa7.62□□□□□ -1.19
CLTCL1-208ENST00000615606 KIAA1644Q3SXP7 199 aa7.62□□□□□ -1.19
CLTCL1-208ENST00000615606 GCSAMLQ5JQS6 135 aa7.62□□□□□ -1.19
CLTCL1-208ENST00000615606 DAZ1Q9NQZ3 744 aaKnown RBP7.62□□□□□ -1.19
CLTCL1-208ENST00000615606 OR1N2Q8NGR9 330 aa7.62□□□□□ -1.19
CLTCL1-208ENST00000615606 SCRT1Q9BWW7 348 aa7.62□□□□□ -1.19
CLTCL1-208ENST00000615606 CTSZQ9UBR2 303 aa7.62□□□□□ -1.19
CLTCL1-208ENST00000615606 A0A0G2JRQ6 117 aa7.62□□□□□ -1.19
CLTCL1-208ENST00000615606 PMS2P5A8MQ11 134 aa7.62□□□□□ -1.19
CLTCL1-208ENST00000615606 TMEM14BQ9NUH8 114 aa7.62□□□□□ -1.19
CLTCL1-208ENST00000615606 ACACBO00763 2458 aa7.62□□□□□ -1.19
CLTCL1-208ENST00000615606 IGHV4-61A0A0C4DH41 118 aa7.61□□□□□ -1.19
CLTCL1-208ENST00000615606 GRIFINA4D1Z8 144 aa7.61□□□□□ -1.19
CLTCL1-208ENST00000615606 CRXO43186 299 aaPredicted RBP7.61□□□□□ -1.19
CLTCL1-208ENST00000615606 LHBP01229 141 aa7.61□□□□□ -1.19
CLTCL1-208ENST00000615606 C10orf105Q8TEF2 133 aa7.61□□□□□ -1.19
CLTCL1-208ENST00000615606 TRAV5A0A0B4J249 113 aa7.61□□□□□ -1.19
CLTCL1-208ENST00000615606 HTN3P15516 51 aa7.61□□□□□ -1.19
CLTCL1-208ENST00000615606 HINT1P49773 126 aaPredicted RBP7.61□□□□□ -1.19
CLTCL1-208ENST00000615606 MUC21Q5SSG8 566 aa7.61□□□□□ -1.19
CLTCL1-208ENST00000615606 Q6ZRM9 215 aa7.61□□□□□ -1.19
CLTCL1-208ENST00000615606 Q6ZSR3 168 aa7.61□□□□□ -1.19
CLTCL1-208ENST00000615606 DTX2Q86UW9 622 aa7.61□□□□□ -1.19
CLTCL1-208ENST00000615606 RHPN1-AS1Q9BWJ2 59 aa7.61□□□□□ -1.19
CLTCL1-208ENST00000615606 NDUFA4L2Q9NRX3 87 aa7.61□□□□□ -1.19
CLTCL1-208ENST00000615606 IGHV4-30-2A0A087WSY4 118 aa7.61□□□□□ -1.19
CLTCL1-208ENST00000615606 MMP23AO75900 390 aa7.61□□□□□ -1.19
CLTCL1-208ENST00000615606 CNTFRP26992 372 aa7.61□□□□□ -1.19
CLTCL1-208ENST00000615606 CARHSP1Q9Y2V2 147 aaKnown RBP7.61□□□□□ -1.19
CLTCL1-208ENST00000615606 TRAV9-1A0A075B6T8 112 aa7.6□□□□□ -1.19
CLTCL1-208ENST00000615606 OR11H12B2RN74 326 aa7.6□□□□□ -1.19
CLTCL1-208ENST00000615606 H3BVH4 76 aa7.6□□□□□ -1.19
CLTCL1-208ENST00000615606 OVOL3O00110 214 aa7.6□□□□□ -1.19
CLTCL1-208ENST00000615606 TMEM249Q2WGJ8 235 aa7.6□□□□□ -1.19
CLTCL1-208ENST00000615606 Q71RC1 249 aaPredicted RBP7.6□□□□□ -1.19
CLTCL1-208ENST00000615606 UQCR10Q9UDW1 63 aa7.6□□□□□ -1.19
CLTCL1-208ENST00000615606 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP7.6□□□□□ -1.198e-7■■■□□ 16.8
CLTCL1-208ENST00000615606 LINC01619G3V211 115 aa7.6□□□□□ -1.19
CLTCL1-208ENST00000615606 ZNF688P0C7X2 276 aa7.6□□□□□ -1.19
CLTCL1-208ENST00000615606 HOXB4P17483 251 aaPredicted RBP7.6□□□□□ -1.19
CLTCL1-208ENST00000615606 SRSF4Q08170 494 aaKnown RBP7.6□□□□□ -1.19
CLTCL1-208ENST00000615606 REC114Q7Z4M0 266 aa7.6□□□□□ -1.19
CLTCL1-208ENST00000615606 OR10AG1Q8NH19 301 aa7.6□□□□□ -1.19
CLTCL1-208ENST00000615606 A8MXK9 166 aa7.6□□□□□ -1.19
CLTCL1-208ENST00000615606 TMEM262E9PQX1 116 aa7.6□□□□□ -1.19
CLTCL1-208ENST00000615606 SYNJ2BPP57105 145 aa7.6□□□□□ -1.19
CLTCL1-208ENST00000615606 TMEM101Q96IK0 257 aa7.6□□□□□ -1.19
CLTCL1-208ENST00000615606 PARD6GQ9BYG4 376 aaPredicted RBP7.6□□□□□ -1.19
CLTCL1-208ENST00000615606 GAGE10A6NGK3 116 aa7.6□□□□□ -1.19
CLTCL1-208ENST00000615606 SLC17A3O00476 420 aa7.6□□□□□ -1.19
CLTCL1-208ENST00000615606 FOLR2P14207 255 aa7.6□□□□□ -1.19
CLTCL1-208ENST00000615606 NDPQ00604 133 aa7.59□□□□□ -1.19
CLTCL1-208ENST00000615606 C1QTNF4Q9BXJ3 329 aa7.59□□□□□ -1.19
CLTCL1-208ENST00000615606 VSIRQ9H7M9 311 aa7.59□□□□□ -1.19
CLTCL1-208ENST00000615606 HOXA3O43365 443 aaPredicted RBP7.59□□□□□ -1.19
CLTCL1-208ENST00000615606 WISP2O76076 250 aa7.59□□□□□ -1.19
CLTCL1-208ENST00000615606 CACNG7P62955 275 aa7.59□□□□□ -1.19
CLTCL1-208ENST00000615606 LYPD1Q8N2G4 141 aa7.59□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms