RNA–Protein interactions for RNA: ENST00000612273.1

COL6A1-207, Transcript of collagen type VI alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL6A1, Length 3,251 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-207ENST00000612273 UQCR10Q9UDW1 63 aa11.27□□□□□ -0.61
COL6A1-207ENST00000612273 NCOR2Q9Y618 2525 aa11.27□□□□□ -0.61
COL6A1-207ENST00000612273 BSNQ9UPA5 3926 aa11.27□□□□□ -0.61
COL6A1-207ENST00000612273 TMEM178BH3BS89 294 aa11.27□□□□□ -0.61
COL6A1-207ENST00000612273 TMEM167AQ8TBQ9 72 aa11.27□□□□□ -0.61
COL6A1-207ENST00000612273 C17orf77Q96MU5 243 aa11.27□□□□□ -0.61
COL6A1-207ENST00000612273 SPG11Q96JI7 2443 aa11.26□□□□□ -0.61
COL6A1-207ENST00000612273 hDV102S1A0JD36 115 aa11.26□□□□□ -0.61
COL6A1-207ENST00000612273 FAM181BA6NEQ2 426 aa11.26□□□□□ -0.61
COL6A1-207ENST00000612273 PRRG2O14669 202 aa11.26□□□□□ -0.61
COL6A1-207ENST00000612273 HIST1H1EP10412 219 aaKnown RBP11.26□□□□□ -0.61
COL6A1-207ENST00000612273 COL8A1P27658 744 aa11.26□□□□□ -0.61
COL6A1-207ENST00000612273 RPL27AP46776 148 aaKnown RBP11.26□□□□□ -0.61
COL6A1-207ENST00000612273 SSX8Q7RTT4 187 aa11.26□□□□□ -0.61
COL6A1-207ENST00000612273 FAM169BQ8N8A8 192 aa11.26□□□□□ -0.61
COL6A1-207ENST00000612273 VSTM2AQ8TAG5 236 aa11.26□□□□□ -0.61
COL6A1-207ENST00000612273 CHODLQ9H9P2 273 aa11.26□□□□□ -0.61
COL6A1-207ENST00000612273 CNIH1O95406 144 aa11.26□□□□□ -0.61
COL6A1-207ENST00000612273 IGLV2-23P01705 113 aa11.26□□□□□ -0.61
COL6A1-207ENST00000612273 PIP4P1Q86T03 277 aa11.26□□□□□ -0.61
COL6A1-207ENST00000612273 GRAMD2BQ96HH9 432 aa11.26□□□□□ -0.61
COL6A1-207ENST00000612273 C19orf24Q9BVV8 132 aa11.26□□□□□ -0.61
COL6A1-207ENST00000612273 Q9H3A6 140 aa11.26□□□□□ -0.61
COL6A1-207ENST00000612273 INSIG2Q9Y5U4 225 aa11.26□□□□□ -0.61
COL6A1-207ENST00000612273 IGHV3-35A0A0C4DH35 117 aa11.26□□□□□ -0.61
COL6A1-207ENST00000612273 IGLL1P15814 213 aa11.26□□□□□ -0.61
COL6A1-207ENST00000612273 LOXP28300 417 aaPredicted RBP11.26□□□□□ -0.61
COL6A1-207ENST00000612273 PERPQ96FX8 193 aa11.26□□□□□ -0.61
COL6A1-207ENST00000612273 ABHD17AQ96GS6 310 aa11.26□□□□□ -0.61
COL6A1-207ENST00000612273 ALKBH7Q9BT30 221 aaPredicted RBP11.26□□□□□ -0.61
COL6A1-207ENST00000612273 CHD8Q9HCK8 2581 aa11.25□□□□□ -0.61
COL6A1-207ENST00000612273 GFRALQ6UXV0 394 aa11.25□□□□□ -0.61
COL6A1-207ENST00000612273 GTSF1Q8WW33 167 aa11.25□□□□□ -0.61
COL6A1-207ENST00000612273 C22orf15Q8WYQ4 148 aa11.25□□□□□ -0.61
COL6A1-207ENST00000612273 HILPDAQ9Y5L2 63 aa11.25□□□□□ -0.61
COL6A1-207ENST00000612273 THBDP07204 575 aa11.25□□□□□ -0.61
COL6A1-207ENST00000612273 CTRLP40313 264 aa11.25□□□□□ -0.61
COL6A1-207ENST00000612273 FXYD7P58549 80 aa11.25□□□□□ -0.61
COL6A1-207ENST00000612273 TEX36Q5VZQ5 186 aa11.25□□□□□ -0.61
COL6A1-207ENST00000612273 Q6ZS92 163 aa11.25□□□□□ -0.61
COL6A1-207ENST00000612273 GPR82Q96P67 336 aa11.25□□□□□ -0.61
COL6A1-207ENST00000612273 FNDC10F2Z333 226 aa11.24□□□□□ -0.61
COL6A1-207ENST00000612273 CHEK1O14757 476 aa11.24□□□□□ -0.61
COL6A1-207ENST00000612273 PSG1P11464 419 aa11.24□□□□□ -0.61
COL6A1-207ENST00000612273 IGLC7A0M8Q6 106 aa11.24□□□□□ -0.61
COL6A1-207ENST00000612273 MBD6Q96DN6 1003 aa11.24□□□□□ -0.61
COL6A1-207ENST00000612273 IGHV1-8P0DP01 117 aa11.24□□□□□ -0.61
COL6A1-207ENST00000612273 CA7P43166 264 aa11.24□□□□□ -0.61
COL6A1-207ENST00000612273 FAM57AQ8TBR7 257 aa11.24□□□□□ -0.61
COL6A1-207ENST00000612273 RNASE6Q93091 150 aaKnown RBP11.24□□□□□ -0.61
COL6A1-207ENST00000612273 TMEM186Q96B77 213 aa11.24□□□□□ -0.61
COL6A1-207ENST00000612273 M0R3E3 92 aa11.23□□□□□ -0.61
COL6A1-207ENST00000612273 IGHV3-23P01764 117 aa11.23□□□□□ -0.61
COL6A1-207ENST00000612273 TSPOP30536 169 aa11.23□□□□□ -0.61
COL6A1-207ENST00000612273 BTF3P20290 206 aaKnown RBP11.23□□□□□ -0.61
COL6A1-207ENST00000612273 PTTG1IPP53801 180 aa11.23□□□□□ -0.61
COL6A1-207ENST00000612273 LINC01560Q8TB33 94 aa11.23□□□□□ -0.61
COL6A1-207ENST00000612273 RPP21Q9H633 154 aaKnown RBP11.23□□□□□ -0.61
COL6A1-207ENST00000612273 HBBP68871 147 aa11.22□□□□□ -0.61
COL6A1-207ENST00000612273 OR4C46A6NHA9 309 aa11.22□□□□□ -0.61
COL6A1-207ENST00000612273 NDUFB8O95169 186 aa11.22□□□□□ -0.61
COL6A1-207ENST00000612273 CRYABP02511 175 aaKnown RBP11.22□□□□□ -0.61
COL6A1-207ENST00000612273 CEACAM8P31997 349 aaPredicted RBP11.22□□□□□ -0.61
COL6A1-207ENST00000612273 MEF2CQ06413 473 aaPredicted RBP11.22□□□□□ -0.61
COL6A1-207ENST00000612273 BCL6BQ8N143 479 aaPredicted RBP11.22□□□□□ -0.61
COL6A1-207ENST00000612273 PNKDQ8N490 385 aa11.22□□□□□ -0.61
COL6A1-207ENST00000612273 KLHDC1Q8N7A1 406 aa11.22□□□□□ -0.61
COL6A1-207ENST00000612273 SRSF12Q8WXF0 261 aaKnown RBP11.22□□□□□ -0.61
COL6A1-207ENST00000612273 TCRAP04437 139 aa11.22□□□□□ -0.61
COL6A1-207ENST00000612273 HES1Q14469 280 aa11.22□□□□□ -0.61
COL6A1-207ENST00000612273 URB1-AS1Q96HZ7 61 aa11.22□□□□□ -0.61
COL6A1-207ENST00000612273 ONECUT1Q9UBC0 465 aa11.22□□□□□ -0.61
COL6A1-207ENST00000612273 LOC389332A0A1B0GUA5 103 aa11.21□□□□□ -0.61
COL6A1-207ENST00000612273 RPEQ96AT9 228 aa11.21□□□□□ -0.61
COL6A1-207ENST00000612273 ZC2HC1AQ96GY0 325 aa11.21□□□□□ -0.61
COL6A1-207ENST00000612273 A8MWL6 223 aa11.21□□□□□ -0.62
COL6A1-207ENST00000612273 FSTL3O95633 263 aa11.21□□□□□ -0.62
COL6A1-207ENST00000612273 COX19Q49B96 90 aa11.21□□□□□ -0.62
COL6A1-207ENST00000612273 HIGD1AQ9Y241 93 aa11.21□□□□□ -0.62
COL6A1-207ENST00000612273 SPTBN4Q9H254 2564 aa11.21□□□□□ -0.62
COL6A1-207ENST00000612273 SERTM2A0A1B0GWG4 89 aa11.2□□□□□ -0.62
COL6A1-207ENST00000612273 E7EQL1 145 aa11.2□□□□□ -0.62
COL6A1-207ENST00000612273 LEPROTL1O95214 131 aa11.2□□□□□ -0.62
COL6A1-207ENST00000612273 HTR1DP28221 377 aa11.2□□□□□ -0.62
COL6A1-207ENST00000612273 IGFL4Q6B9Z1 124 aa11.2□□□□□ -0.62
COL6A1-207ENST00000612273 ZNF596Q8TC21 504 aa11.2□□□□□ -0.62
COL6A1-207ENST00000612273 TMEM133Q9H2Q1 129 aa11.2□□□□□ -0.62
COL6A1-207ENST00000612273 NCOR1P1Q9H4R4 102 aa11.2□□□□□ -0.62
COL6A1-207ENST00000612273 LINC00574Q9H8X3 128 aa11.2□□□□□ -0.62
COL6A1-207ENST00000612273 IGHV1-69-2A0A0G2JMI3 117 aa11.2□□□□□ -0.62
COL6A1-207ENST00000612273 C20orf202A1L168 122 aa11.2□□□□□ -0.62
COL6A1-207ENST00000612273 PPP1R27Q86WC6 154 aa11.2□□□□□ -0.62
COL6A1-207ENST00000612273 RASL11BQ9BPW5 248 aa11.2□□□□□ -0.62
COL6A1-207ENST00000612273 SIGLEC9Q9Y336 463 aa11.2□□□□□ -0.62
COL6A1-207ENST00000612273 IGHV2-26A0A0B4J1V2 119 aa11.2□□□□□ -0.62
COL6A1-207ENST00000612273 ARF6P62330 175 aa11.2□□□□□ -0.62
COL6A1-207ENST00000612273 C5orf17Q8NAS9 161 aa11.2□□□□□ -0.62
COL6A1-207ENST00000612273 TMEM70Q9BUB7 260 aa11.2□□□□□ -0.62
COL6A1-207ENST00000612273 RNF24Q9Y225 148 aa11.2□□□□□ -0.62
COL6A1-207ENST00000612273 ZFP30Q9Y2G7 519 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms