RNA–Protein interactions for RNA: ENST00000611848.1

SMAD4-217, Transcript of SMAD family member 4, humanhuman

TSL 5

Gene SMAD4, Length 1,648 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-217ENST00000611848 NSUN5P1Q3KNT7 163 aa6.88□□□□□ -1.31
SMAD4-217ENST00000611848 ZFP82Q8N141 532 aa6.88□□□□□ -1.31
SMAD4-217ENST00000611848 STPG3Q8N7X2 389 aa6.88□□□□□ -1.31
SMAD4-217ENST00000611848 RNF152Q8N8N0 203 aa6.88□□□□□ -1.31
SMAD4-217ENST00000611848 CACNG8Q8WXS5 425 aa6.88□□□□□ -1.31
SMAD4-217ENST00000611848 OR4F4Q96R69 305 aa6.88□□□□□ -1.31
SMAD4-217ENST00000611848 TXNDC17Q9BRA2 123 aa6.88□□□□□ -1.31
SMAD4-217ENST00000611848 ZNF430Q9H8G1 570 aaPredicted RBP6.88□□□□□ -1.31
SMAD4-217ENST00000611848 PRELID1Q9Y255 219 aa6.88□□□□□ -1.31
SMAD4-217ENST00000611848 CMYA5Q8N3K9 4069 aa6.87□□□□□ -1.31
SMAD4-217ENST00000611848 ADARB2-AS1A8MUL3 147 aa6.87□□□□□ -1.31
SMAD4-217ENST00000611848 C11orf94C9JXX5 98 aa6.87□□□□□ -1.31
SMAD4-217ENST00000611848 E7EUB6 86 aa6.87□□□□□ -1.31
SMAD4-217ENST00000611848 EGR2P11161 476 aaPredicted RBP6.87□□□□□ -1.31
SMAD4-217ENST00000611848 NPPCP23582 126 aa6.87□□□□□ -1.31
SMAD4-217ENST00000611848 PSMB8P28062 276 aa6.87□□□□□ -1.31
SMAD4-217ENST00000611848 RHOBP62745 196 aa6.87□□□□□ -1.31
SMAD4-217ENST00000611848 SSBP2P81877 361 aaPredicted RBP6.87□□□□□ -1.31
SMAD4-217ENST00000611848 CD69Q07108 199 aa6.87□□□□□ -1.31
SMAD4-217ENST00000611848 GAMTQ14353 236 aa6.87□□□□□ -1.31
SMAD4-217ENST00000611848 TNXAQ16473 311 aa6.87□□□□□ -1.31
SMAD4-217ENST00000611848 C19orf54Q5BKX5 351 aa6.87□□□□□ -1.31
SMAD4-217ENST00000611848 KHDC1LQ5JSQ8 128 aa6.87□□□□□ -1.31
SMAD4-217ENST00000611848 PVRIGQ6DKI7 326 aa6.87□□□□□ -1.31
SMAD4-217ENST00000611848 UNQ5815/PRO19632Q6UWF5 114 aa6.87□□□□□ -1.31
SMAD4-217ENST00000611848 OR4F17Q8NGA8 305 aa6.87□□□□□ -1.31
SMAD4-217ENST00000611848 OR10W1Q8NGF6 305 aa6.87□□□□□ -1.31
SMAD4-217ENST00000611848 RNASEH2CQ8TDP1 164 aaKnown RBP6.87□□□□□ -1.31
SMAD4-217ENST00000611848 C2CD4CQ8TF44 421 aa6.87□□□□□ -1.31
SMAD4-217ENST00000611848 Q8WTZ3 238 aa6.87□□□□□ -1.31
SMAD4-217ENST00000611848 SRSF12Q8WXF0 261 aaKnown RBP6.87□□□□□ -1.31
SMAD4-217ENST00000611848 SLC35E1Q96K37 410 aa6.87□□□□□ -1.31
SMAD4-217ENST00000611848 FAM103A1Q9BTL3 118 aaKnown RBP6.87□□□□□ -1.31
SMAD4-217ENST00000611848 PARLQ9H300 379 aa6.87□□□□□ -1.31
SMAD4-217ENST00000611848 IGKV1OR2-108A0A075B7D4 117 aa6.87□□□□□ -1.31
SMAD4-217ENST00000611848 C5orf52A6NGY3 159 aa6.87□□□□□ -1.31
SMAD4-217ENST00000611848 F6UZH7 168 aa6.87□□□□□ -1.31
SMAD4-217ENST00000611848 IGLV1-40P01703 118 aa6.87□□□□□ -1.31
SMAD4-217ENST00000611848 CXCL1P09341 107 aa6.87□□□□□ -1.31
SMAD4-217ENST00000611848 ARL14EPLP0DKL9 152 aa6.87□□□□□ -1.31
SMAD4-217ENST00000611848 RPL23P62829 140 aaKnown RBP6.87□□□□□ -1.31
SMAD4-217ENST00000611848 WT1-ASQ06250 92 aa6.87□□□□□ -1.31
SMAD4-217ENST00000611848 HIST2H2BDQ6DRA6 164 aa6.87□□□□□ -1.31
SMAD4-217ENST00000611848 ZNF343Q6P1L6 599 aa6.87□□□□□ -1.31
SMAD4-217ENST00000611848 REC114Q7Z4M0 266 aa6.87□□□□□ -1.31
SMAD4-217ENST00000611848 IQCF2Q8IXL9 164 aa6.87□□□□□ -1.31
SMAD4-217ENST00000611848 RPUSD4Q96CM3 377 aaKnown RBP6.87□□□□□ -1.31
SMAD4-217ENST00000611848 SEPSECSQ9HD40 501 aaKnown RBP6.87□□□□□ -1.31
SMAD4-217ENST00000611848 TRBV24-1A0A075B6N3 115 aa6.86□□□□□ -1.31
SMAD4-217ENST00000611848 TGIF2-C20orf24A0A0A6YYL0 155 aa6.86□□□□□ -1.31
SMAD4-217ENST00000611848 H3BUA1 57 aa6.86□□□□□ -1.31
SMAD4-217ENST00000611848 CLN5O75503 358 aa6.86□□□□□ -1.31
SMAD4-217ENST00000611848 PF4V1P10720 104 aa6.86□□□□□ -1.31
SMAD4-217ENST00000611848 GCHFRP30047 84 aa6.86□□□□□ -1.31
SMAD4-217ENST00000611848 CDX1P47902 265 aaPredicted RBP6.86□□□□□ -1.31
SMAD4-217ENST00000611848 RAB9AP51151 201 aa6.86□□□□□ -1.31
SMAD4-217ENST00000611848 ZNF674Q2M3X9 581 aa6.86□□□□□ -1.31
SMAD4-217ENST00000611848 SPATA31B1PQ5VZV4 182 aa6.86□□□□□ -1.31
SMAD4-217ENST00000611848 SLC16A13Q7RTY0 426 aa6.86□□□□□ -1.31
SMAD4-217ENST00000611848 LINC00518Q8N0U6 118 aa6.86□□□□□ -1.31
SMAD4-217ENST00000611848 MYOZ3Q8TDC0 251 aa6.86□□□□□ -1.31
SMAD4-217ENST00000611848 DOK5Q9P104 306 aa6.86□□□□□ -1.31
SMAD4-217ENST00000611848 ARL2-SNX15V9GYD0 113 aa6.86□□□□□ -1.31
SMAD4-217ENST00000611848 A0A1W2PRX2 142 aa6.85□□□□□ -1.31
SMAD4-217ENST00000611848 UBE2CO00762 179 aa6.85□□□□□ -1.31
SMAD4-217ENST00000611848 OR10J1P30954 320 aa6.85□□□□□ -1.31
SMAD4-217ENST00000611848 RPL27AP46776 148 aaKnown RBP6.85□□□□□ -1.31
SMAD4-217ENST00000611848 ATP5G3P48201 142 aa6.85□□□□□ -1.31
SMAD4-217ENST00000611848 SUB1P53999 127 aaKnown RBP eCLIP6.85□□□□□ -1.31
SMAD4-217ENST00000611848 SNRPEP62304 92 aaKnown RBP6.85□□□□□ -1.31
SMAD4-217ENST00000611848 TNP2Q05952 138 aa6.85□□□□□ -1.31
SMAD4-217ENST00000611848 ADIRFQ15847 76 aa6.85□□□□□ -1.31
SMAD4-217ENST00000611848 MLANAQ16655 118 aa6.85□□□□□ -1.31
SMAD4-217ENST00000611848 C10orf55Q5SWW7 151 aa6.85□□□□□ -1.31
SMAD4-217ENST00000611848 ZNF114Q8NC26 417 aa6.85□□□□□ -1.31
SMAD4-217ENST00000611848 UBE2E2Q96LR5 201 aa6.85□□□□□ -1.31
SMAD4-217ENST00000611848 PYGO2Q9BRQ0 406 aa6.85□□□□□ -1.31
SMAD4-217ENST00000611848 KLK15Q9H2R5 256 aa6.85□□□□□ -1.31
SMAD4-217ENST00000611848 FUT9Q9Y231 359 aa6.85□□□□□ -1.31
SMAD4-217ENST00000611848 URGCP-MRPS24S4R325 110 aa6.85□□□□□ -1.31
SMAD4-217ENST00000611848 VWFP04275 2813 aa6.85□□□□□ -1.31
SMAD4-217ENST00000611848 PKD1L1Q8TDX9 2849 aa6.85□□□□□ -1.31
SMAD4-217ENST00000611848 TGOLN2O43493 480 aa6.84□□□□□ -1.31
SMAD4-217ENST00000611848 BRI3O95415 125 aa6.84□□□□□ -1.31
SMAD4-217ENST00000611848 MT-CO2P00403 227 aa6.84□□□□□ -1.31
SMAD4-217ENST00000611848 PFN1P07737 140 aaKnown RBP6.84□□□□□ -1.31
SMAD4-217ENST00000611848 OR5G3P0C626 314 aa6.84□□□□□ -1.31
SMAD4-217ENST00000611848 AREGP15514 252 aa6.84□□□□□ -1.31
SMAD4-217ENST00000611848 RPS10P46783 165 aaKnown RBP6.84□□□□□ -1.31
SMAD4-217ENST00000611848 UBE2G2P60604 165 aa6.84□□□□□ -1.31
SMAD4-217ENST00000611848 ASPHD1Q5U4P2 390 aa6.84□□□□□ -1.31
SMAD4-217ENST00000611848 CST9LP1Q5W188 147 aa6.84□□□□□ -1.31
SMAD4-217ENST00000611848 LCNL1Q6ZST4 164 aa6.84□□□□□ -1.31
SMAD4-217ENST00000611848 TTC9CQ8N5M4 171 aa6.84□□□□□ -1.31
SMAD4-217ENST00000611848 ZNF491Q8N8L2 437 aa6.84□□□□□ -1.31
SMAD4-217ENST00000611848 THAP8Q8NA92 274 aa6.84□□□□□ -1.31
SMAD4-217ENST00000611848 KLHL30-AS1Q8NEE0 82 aa6.84□□□□□ -1.31
SMAD4-217ENST00000611848 OR51G1Q8NGK1 321 aa6.84□□□□□ -1.31
SMAD4-217ENST00000611848 FAM110DQ8TAY7 271 aaPredicted RBP6.84□□□□□ -1.31
SMAD4-217ENST00000611848 FAM210BQ96KR6 192 aa6.84□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms