RNA–Protein interactions for RNA: ENST00000610733.1

TPM1-233, Transcript of tropomyosin 1, humanhuman

TSL 2 BASIC

Gene TPM1, Length 3,957 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-233ENST00000610733 COL12A1Q99715 3063 aa7.8□□□□□ -1.16
TPM1-233ENST00000610733 IGHV3OR16-10A0A075B7F0 116 aa7.8□□□□□ -1.16
TPM1-233ENST00000610733 OCIAD2Q56VL3 154 aa7.8□□□□□ -1.16
TPM1-233ENST00000610733 OR4C13Q8NGP0 309 aa7.8□□□□□ -1.16
TPM1-233ENST00000610733 CHRDL1Q9BU40 450 aa7.8□□□□□ -1.16
TPM1-233ENST00000610733 TMEM70Q9BUB7 260 aa7.8□□□□□ -1.16
TPM1-233ENST00000610733 RPUSD1Q9UJJ7 312 aaKnown RBP7.8□□□□□ -1.16
TPM1-233ENST00000610733 FOXA2Q9Y261 457 aaPredicted RBP7.8□□□□□ -1.16
TPM1-233ENST00000610733 APOHP02749 345 aaPredicted RBP7.8□□□□□ -1.16
TPM1-233ENST00000610733 GLRXP35754 106 aa7.8□□□□□ -1.16
TPM1-233ENST00000610733 RPL15P61313 204 aaKnown RBP7.8□□□□□ -1.16
TPM1-233ENST00000610733 CD69Q07108 199 aa7.8□□□□□ -1.16
TPM1-233ENST00000610733 ECSCRQ19T08 205 aa7.8□□□□□ -1.16
TPM1-233ENST00000610733 C1orf229Q6ZS94 237 aaPredicted RBP7.8□□□□□ -1.16
TPM1-233ENST00000610733 LINC00173Q6ZV60 143 aa7.8□□□□□ -1.16
TPM1-233ENST00000610733 C1orf174Q8IYL3 243 aa7.8□□□□□ -1.16
TPM1-233ENST00000610733 HIGD1AQ9Y241 93 aa7.8□□□□□ -1.16
TPM1-233ENST00000610733 RNF114Q9Y508 228 aa7.8□□□□□ -1.16
TPM1-233ENST00000610733 CD40P25942 277 aa7.8□□□□□ -1.16
TPM1-233ENST00000610733 VDAC2P45880 294 aaPredicted RBP7.8□□□□□ -1.16
TPM1-233ENST00000610733 SRSF7Q16629 238 aaKnown RBP eCLIP7.8□□□□□ -1.16
TPM1-233ENST00000610733 CPAMD8Q8IZJ3 1885 aa7.8□□□□□ -1.16
TPM1-233ENST00000610733 VSTM2AQ8TAG5 236 aa7.8□□□□□ -1.16
TPM1-233ENST00000610733 AAMDCQ9H7C9 122 aa7.8□□□□□ -1.16
TPM1-233ENST00000610733 ZZEF1O43149 2961 aa7.8□□□□□ -1.16
TPM1-233ENST00000610733 LRP4O75096 1905 aa7.79□□□□□ -1.16
TPM1-233ENST00000610733 IGKV1OR2-108A0A075B7D4 117 aa7.79□□□□□ -1.16
TPM1-233ENST00000610733 PMS2P5A8MQ11 134 aa7.79□□□□□ -1.16
TPM1-233ENST00000610733 NCR2O95944 276 aa7.79□□□□□ -1.16
TPM1-233ENST00000610733 HBBP68871 147 aa7.79□□□□□ -1.16
TPM1-233ENST00000610733 TWIST1Q15672 202 aa7.79□□□□□ -1.16
TPM1-233ENST00000610733 SLC25A34Q6PIV7 304 aa7.79□□□□□ -1.16
TPM1-233ENST00000610733 ZNF474Q6S9Z5 364 aaPredicted RBP7.79□□□□□ -1.16
TPM1-233ENST00000610733 PNKDQ8N490 385 aa7.79□□□□□ -1.16
TPM1-233ENST00000610733 Q9H3A6 140 aa7.79□□□□□ -1.16
TPM1-233ENST00000610733 V9GYV3 84 aa7.79□□□□□ -1.16
TPM1-233ENST00000610733 E7EUB6 86 aa7.79□□□□□ -1.16
TPM1-233ENST00000610733 C15orf65H3BRN8 121 aa7.79□□□□□ -1.16
TPM1-233ENST00000610733 SS18L1O75177 396 aaPredicted RBP7.79□□□□□ -1.16
TPM1-233ENST00000610733 TDGF1P13385 188 aa7.79□□□□□ -1.16
TPM1-233ENST00000610733 SAMD13Q5VXD3 122 aa7.79□□□□□ -1.16
TPM1-233ENST00000610733 BPIFA4PQ86YQ2 179 aa7.79□□□□□ -1.16
TPM1-233ENST00000610733 CDX4O14627 284 aaPredicted RBP7.79□□□□□ -1.16
TPM1-233ENST00000610733 CX3CL1P78423 397 aa7.79□□□□□ -1.16
TPM1-233ENST00000610733 PRCDQ00LT1 54 aa7.79□□□□□ -1.16
TPM1-233ENST00000610733 TPTE2P1Q5T6R2 138 aa7.79□□□□□ -1.16
TPM1-233ENST00000610733 GP6Q9HCN6 339 aa7.79□□□□□ -1.16
TPM1-233ENST00000610733 IZUMO1RA6ND01 250 aa7.78□□□□□ -1.16
TPM1-233ENST00000610733 SMKR1H3BMG3 65 aa7.78□□□□□ -1.16
TPM1-233ENST00000610733 FBLN7Q53RD9 439 aa7.78□□□□□ -1.16
TPM1-233ENST00000610733 TXNDC17Q9BRA2 123 aa7.78□□□□□ -1.16
TPM1-233ENST00000610733 FNDC4Q9H6D8 234 aaPredicted RBP7.78□□□□□ -1.16
TPM1-233ENST00000610733 GCSHP23434 173 aa7.78□□□□□ -1.16
TPM1-233ENST00000610733 PLSCR4Q9NRQ2 329 aa7.78□□□□□ -1.16
TPM1-233ENST00000610733 CEP192Q8TEP8 1941 aa7.78□□□□□ -1.16
TPM1-233ENST00000610733 NPIPB11E5RHQ5 1161 aa7.78□□□□□ -1.16
TPM1-233ENST00000610733 RIPPLY3P57055 190 aa7.78□□□□□ -1.16
TPM1-233ENST00000610733 VWC2Q2TAL6 325 aa7.78□□□□□ -1.16
TPM1-233ENST00000610733 AMMECR1LQ6DCA0 310 aa7.78□□□□□ -1.16
TPM1-233ENST00000610733 TMEM136Q6ZRR5 245 aa7.78□□□□□ -1.16
TPM1-233ENST00000610733 Q8TAT8 98 aa7.78□□□□□ -1.16
TPM1-233ENST00000610733 C18orf32Q8TCD1 76 aa7.78□□□□□ -1.16
TPM1-233ENST00000610733 GNB1LQ9BYB4 327 aa7.78□□□□□ -1.16
TPM1-233ENST00000610733 A0A1W2PRE2 83 aa7.78□□□□□ -1.16
TPM1-233ENST00000610733 FAM181BA6NEQ2 426 aa7.78□□□□□ -1.16
TPM1-233ENST00000610733 Q6ZSR3 168 aa7.78□□□□□ -1.16
TPM1-233ENST00000610733 CST9LQ9H4G1 147 aa7.78□□□□□ -1.16
TPM1-233ENST00000610733 AP5S1Q9NUS5 200 aa7.78□□□□□ -1.16
TPM1-233ENST00000610733 THYN1Q9P016 225 aa7.78□□□□□ -1.16
TPM1-233ENST00000610733 EPDR1Q9UM22 224 aa7.78□□□□□ -1.16
TPM1-233ENST00000610733 KIR2DL5BA0A0G2JN68 375 aa7.77□□□□□ -1.17
TPM1-233ENST00000610733 KIR2DL5BA0A0G2JPC4 375 aa7.77□□□□□ -1.17
TPM1-233ENST00000610733 IGKV3-15P01624 115 aa7.77□□□□□ -1.17
TPM1-233ENST00000610733 TSPOP30536 169 aa7.77□□□□□ -1.17
TPM1-233ENST00000610733 WT1-ASQ06250 92 aa7.77□□□□□ -1.17
TPM1-233ENST00000610733 TMEM200BQ69YZ2 307 aa7.77□□□□□ -1.17
TPM1-233ENST00000610733 KIR2DL5AQ8N109 375 aa7.77□□□□□ -1.17
TPM1-233ENST00000610733 LINC00527Q9UJ94 153 aa7.77□□□□□ -1.17
TPM1-233ENST00000610733 K7EM74 188 aa7.77□□□□□ -1.17
TPM1-233ENST00000610733 RNASE2P10153 161 aaKnown RBP7.77□□□□□ -1.17
TPM1-233ENST00000610733 IGLL1P15814 213 aa7.77□□□□□ -1.17
TPM1-233ENST00000610733 EVI2AP22794 236 aa7.77□□□□□ -1.17
TPM1-233ENST00000610733 CKS2P33552 79 aa7.77□□□□□ -1.17
TPM1-233ENST00000610733 TEX45Q8NA69 505 aa7.77□□□□□ -1.17
TPM1-233ENST00000610733 LOXL4Q96JB6 756 aa7.77□□□□□ -1.17
TPM1-233ENST00000610733 PYGO2Q9BRQ0 406 aa7.77□□□□□ -1.17
TPM1-233ENST00000610733 NGBQ9NPG2 151 aa7.77□□□□□ -1.17
TPM1-233ENST00000610733 C7orf71A4D174 169 aa7.77□□□□□ -1.17
TPM1-233ENST00000610733 C17orf58Q2M2W7 97 aa7.77□□□□□ -1.17
TPM1-233ENST00000610733 KRTAP27-1Q3LI81 207 aa7.77□□□□□ -1.17
TPM1-233ENST00000610733 RPP21Q9H633 154 aaKnown RBP7.77□□□□□ -1.17
TPM1-233ENST00000610733 OSTCQ9NRP0 149 aa7.77□□□□□ -1.17
TPM1-233ENST00000610733 ATG2AQ2TAZ0 1938 aa7.76□□□□□ -1.17
TPM1-233ENST00000610733 HTN1P15515 57 aa7.76□□□□□ -1.17
TPM1-233ENST00000610733 RITA1Q96K30 269 aa7.76□□□□□ -1.17
TPM1-233ENST00000610733 GPR82Q96P67 336 aa7.76□□□□□ -1.17
TPM1-233ENST00000610733 MRPL36Q9P0J6 103 aaKnown RBP7.76□□□□□ -1.17
TPM1-233ENST00000610733 SLC25A15Q9Y619 301 aa7.76□□□□□ -1.17
TPM1-233ENST00000610733 GAGE10A6NGK3 116 aa7.76□□□□□ -1.17
TPM1-233ENST00000610733 OR2T8A6NH00 312 aa7.76□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms