RNA–Protein interactions for RNA: ENST00000609684.2

PCDHB16-201, Transcript of protocadherin beta 16, humanhuman

APPRIS P1 BASIC

Gene PCDHB16, Length 5,001 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB16-201ENST00000609684 MLANAQ16655 118 aa11.64□□□□□ -0.55
PCDHB16-201ENST00000609684 C5orf64Q2M2E5 130 aa11.64□□□□□ -0.55
PCDHB16-201ENST00000609684 SAMD13Q5VXD3 122 aa11.64□□□□□ -0.55
PCDHB16-201ENST00000609684 ZNRD1Q9P1U0 126 aa11.64□□□□□ -0.55
PCDHB16-201ENST00000609684 SUMO2P61956 95 aaKnown RBP11.63□□□□□ -0.55
PCDHB16-201ENST00000609684 Q6ZR03 302 aa11.63□□□□□ -0.55
PCDHB16-201ENST00000609684 ZNF256Q9Y2P7 627 aaPredicted RBP11.63□□□□□ -0.55
PCDHB16-201ENST00000609684 MOB4Q9Y3A3 225 aa11.63□□□□□ -0.55
PCDHB16-201ENST00000609684 E7EQL1 145 aa11.63□□□□□ -0.55
PCDHB16-201ENST00000609684 PRR30Q53SZ7 412 aaPredicted RBP11.63□□□□□ -0.55
PCDHB16-201ENST00000609684 MED13LQ71F56 2210 aa11.63□□□□□ -0.55
PCDHB16-201ENST00000609684 IGKV2-40A0A087WW87 121 aaPredicted RBP11.63□□□□□ -0.55
PCDHB16-201ENST00000609684 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.63□□□□□ -0.55
PCDHB16-201ENST00000609684 IGKV2D-40P01614 121 aaPredicted RBP11.63□□□□□ -0.55
PCDHB16-201ENST00000609684 RNASE2P10153 161 aaKnown RBP11.63□□□□□ -0.55
PCDHB16-201ENST00000609684 MINOS1Q5TGZ0 78 aa11.63□□□□□ -0.55
PCDHB16-201ENST00000609684 TTC9CQ8N5M4 171 aa11.63□□□□□ -0.55
PCDHB16-201ENST00000609684 MINOS1-NBL1R4GNA1 71 aa11.63□□□□□ -0.55
PCDHB16-201ENST00000609684 NOTCH3Q9UM47 2321 aa11.63□□□□□ -0.55
PCDHB16-201ENST00000609684 TCRAP04437 139 aa11.63□□□□□ -0.55
PCDHB16-201ENST00000609684 GNLYP22749 145 aa11.63□□□□□ -0.55
PCDHB16-201ENST00000609684 LMO1P25800 156 aa11.63□□□□□ -0.55
PCDHB16-201ENST00000609684 VDAC2P45880 294 aaPredicted RBP11.63□□□□□ -0.55
PCDHB16-201ENST00000609684 MST1LQ2TV78 715 aa11.63□□□□□ -0.55
PCDHB16-201ENST00000609684 LINC01587Q99440 93 aa11.63□□□□□ -0.55
PCDHB16-201ENST00000609684 TRAV21A0A0B4J279 112 aa11.62□□□□□ -0.55
PCDHB16-201ENST00000609684 OOSP1A8MZH6 123 aa11.62□□□□□ -0.55
PCDHB16-201ENST00000609684 OR10J3Q5JRS4 329 aa11.62□□□□□ -0.55
PCDHB16-201ENST00000609684 WDR86Q86TI4 376 aa11.62□□□□□ -0.55
PCDHB16-201ENST00000609684 SHANK1Q9Y566 2161 aa11.62□□□□□ -0.55
PCDHB16-201ENST00000609684 SMIM13P0DJ93 91 aa11.62□□□□□ -0.55
PCDHB16-201ENST00000609684 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.62□□□□□ -0.55
PCDHB16-201ENST00000609684 AMBPP02760 352 aa11.62□□□□□ -0.55
PCDHB16-201ENST00000609684 PRR31Q5SQ13 230 aa11.62□□□□□ -0.55
PCDHB16-201ENST00000609684 SPSB3Q6PJ21 355 aa11.62□□□□□ -0.55
PCDHB16-201ENST00000609684 PEMTQ9UBM1 199 aa11.62□□□□□ -0.55
PCDHB16-201ENST00000609684 PEF1Q9UBV8 284 aaKnown RBP11.62□□□□□ -0.55
PCDHB16-201ENST00000609684 LDLRAD2Q5SZI1 272 aa11.62□□□□□ -0.55
PCDHB16-201ENST00000609684 NDUFAF3Q9BU61 184 aa11.62□□□□□ -0.55
PCDHB16-201ENST00000609684 SRD5A1P18405 259 aa11.61□□□□□ -0.55
PCDHB16-201ENST00000609684 BRD3OSQ6XYD6 125 aa11.61□□□□□ -0.55
PCDHB16-201ENST00000609684 SIGLEC15Q6ZMC9 328 aa11.61□□□□□ -0.55
PCDHB16-201ENST00000609684 ATP5L2Q7Z4Y8 100 aa11.61□□□□□ -0.55
PCDHB16-201ENST00000609684 OR5AN1Q8NGI8 311 aa11.61□□□□□ -0.55
PCDHB16-201ENST00000609684 YAE1D1Q9NRH1 226 aa11.61□□□□□ -0.55
PCDHB16-201ENST00000609684 M0R1W7 72 aa11.61□□□□□ -0.55
PCDHB16-201ENST00000609684 C9JQL5 133 aa11.61□□□□□ -0.55
PCDHB16-201ENST00000609684 HBDP02042 147 aa11.61□□□□□ -0.55
PCDHB16-201ENST00000609684 FAM90A2PQ658T7 463 aa11.61□□□□□ -0.55
PCDHB16-201ENST00000609684 NIT1Q86X76 327 aa11.61□□□□□ -0.55
PCDHB16-201ENST00000609684 CRIM1Q9NZV1 1036 aa11.61□□□□□ -0.55
PCDHB16-201ENST00000609684 SELENOKQ9Y6D0 94 aa11.61□□□□□ -0.55
PCDHB16-201ENST00000609684 TNFSF13O75888 250 aa11.61□□□□□ -0.55
PCDHB16-201ENST00000609684 NDUFA3O95167 84 aa11.61□□□□□ -0.55
PCDHB16-201ENST00000609684 CD33P20138 364 aa11.61□□□□□ -0.55
PCDHB16-201ENST00000609684 PLA2G2CQ5R387 149 aa11.61□□□□□ -0.55
PCDHB16-201ENST00000609684 BEX4Q9NWD9 120 aaPredicted RBP11.6□□□□□ -0.55
PCDHB16-201ENST00000609684 LAMTOR2Q9Y2Q5 125 aa11.6□□□□□ -0.55
PCDHB16-201ENST00000609684 ITGB1BP1O14713 200 aa11.6□□□□□ -0.55
PCDHB16-201ENST00000609684 PPBPP02775 128 aa11.6□□□□□ -0.55
PCDHB16-201ENST00000609684 YLPM1P49750 1951 aaKnown RBP11.6□□□□□ -0.55
PCDHB16-201ENST00000609684 EVI2AP22794 236 aa11.59□□□□□ -0.55
PCDHB16-201ENST00000609684 DOCK10Q96BY6 2186 aa11.59□□□□□ -0.55
PCDHB16-201ENST00000609684 TMEM262E9PQX1 116 aa11.59□□□□□ -0.55
PCDHB16-201ENST00000609684 DTX1Q86Y01 620 aa11.59□□□□□ -0.55
PCDHB16-201ENST00000609684 WFDC12Q8WWY7 111 aa11.59□□□□□ -0.55
PCDHB16-201ENST00000609684 TRAV9-2A0A087WT02 112 aa11.59□□□□□ -0.55
PCDHB16-201ENST00000609684 ZNF418Q8TF45 676 aaPredicted RBP11.59□□□□□ -0.55
PCDHB16-201ENST00000609684 BDP1A6H8Y1 2624 aa11.59□□□□□ -0.55
PCDHB16-201ENST00000609684 TRAV8-1A0A0A6YYK1 113 aa11.59□□□□□ -0.55
PCDHB16-201ENST00000609684 WIPF3A6NGB9 483 aa11.59□□□□□ -0.55
PCDHB16-201ENST00000609684 H3BUX3 64 aa11.59□□□□□ -0.55
PCDHB16-201ENST00000609684 ERVK11-1P61568 191 aa11.59□□□□□ -0.55
PCDHB16-201ENST00000609684 NXT2Q9NPJ8 142 aaKnown RBP11.59□□□□□ -0.55
PCDHB16-201ENST00000609684 DENND4CQ5VZ89 1909 aa11.58□□□□□ -0.56
PCDHB16-201ENST00000609684 PAX9P55771 341 aa11.58□□□□□ -0.56
PCDHB16-201ENST00000609684 A0A1W2PPI3 338 aa11.58□□□□□ -0.56
PCDHB16-201ENST00000609684 MRAP2Q96G30 205 aa11.58□□□□□ -0.56
PCDHB16-201ENST00000609684 ST20Q9HBF5 79 aa11.58□□□□□ -0.56
PCDHB16-201ENST00000609684 ZFHX2Q9C0A1 2572 aaPredicted RBP11.58□□□□□ -0.56
PCDHB16-201ENST00000609684 DUX4L9Q6RFH8 374 aaPredicted RBP11.58□□□□□ -0.56
PCDHB16-201ENST00000609684 C11orf44Q8N8P7 122 aa11.58□□□□□ -0.56
PCDHB16-201ENST00000609684 MSRB2Q9Y3D2 182 aa11.58□□□□□ -0.56
PCDHB16-201ENST00000609684 LY96Q9Y6Y9 160 aa11.58□□□□□ -0.56
PCDHB16-201ENST00000609684 OVOL1O14753 267 aa11.58□□□□□ -0.56
PCDHB16-201ENST00000609684 DUSP14O95147 198 aaKnown RBP11.58□□□□□ -0.56
PCDHB16-201ENST00000609684 IGKV1-39P01597 117 aa11.58□□□□□ -0.56
PCDHB16-201ENST00000609684 IGKV1D-39P04432 117 aa11.58□□□□□ -0.56
PCDHB16-201ENST00000609684 CACNG7P62955 275 aa11.58□□□□□ -0.56
PCDHB16-201ENST00000609684 IGFL3Q6UXB1 125 aa11.58□□□□□ -0.56
PCDHB16-201ENST00000609684 MRPL16Q9NX20 251 aaKnown RBP11.58□□□□□ -0.56
PCDHB16-201ENST00000609684 F2Z2F3 143 aa11.57□□□□□ -0.56
PCDHB16-201ENST00000609684 IGLV3-1P01715 115 aa11.57□□□□□ -0.56
PCDHB16-201ENST00000609684 GATA4P43694 442 aa11.57□□□□□ -0.56
PCDHB16-201ENST00000609684 UNQ6494/PRO21346Q6UXR6 183 aa11.57□□□□□ -0.56
PCDHB16-201ENST00000609684 TMEM256Q8N2U0 113 aa11.57□□□□□ -0.56
PCDHB16-201ENST00000609684 COPS9Q8WXC6 57 aa11.57□□□□□ -0.56
PCDHB16-201ENST00000609684 CHCHD1Q96BP2 118 aaKnown RBP11.57□□□□□ -0.56
PCDHB16-201ENST00000609684 BPESC1Q9GZL8 116 aa11.57□□□□□ -0.56
PCDHB16-201ENST00000609684 PCNX2A6NKB5 2137 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms