RNA–Protein interactions for RNA: ENST00000609104.5

USP6NL-205, Transcript of USP6 N-terminal like, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene USP6NL, Length 11,377 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-205ENST00000609104 TMEM238C9JI98 176 aa10.82□□□□□ -0.68
USP6NL-205ENST00000609104 TIMM23O14925 209 aa10.82□□□□□ -0.68
USP6NL-205ENST00000609104 GUSBP1Q15486 140 aa10.82□□□□□ -0.68
USP6NL-205ENST00000609104 TCRAP04437 139 aa10.82□□□□□ -0.68
USP6NL-205ENST00000609104 RNASE6Q93091 150 aaKnown RBP10.82□□□□□ -0.68
USP6NL-205ENST00000609104 RCHY1Q96PM5 261 aa10.82□□□□□ -0.68
USP6NL-205ENST00000609104 ZGRF1Q86YA3 2104 aa10.81□□□□□ -0.68
USP6NL-205ENST00000609104 ZNF625Q96I27 306 aaPredicted RBP10.81□□□□□ -0.68
USP6NL-205ENST00000609104 MGST2Q99735 147 aa10.81□□□□□ -0.68
USP6NL-205ENST00000609104 PRADC1Q9BSG0 188 aa10.81□□□□□ -0.68
USP6NL-205ENST00000609104 MBNL3Q9NUK0 354 aaKnown RBP10.81□□□□□ -0.68
USP6NL-205ENST00000609104 IGKV1D-8A0A087WSZ0 117 aa10.81□□□□□ -0.68
USP6NL-205ENST00000609104 GGTLC1Q9BX51 225 aa10.81□□□□□ -0.68
USP6NL-205ENST00000609104 C2orf82Q6UX34 121 aa10.81□□□□□ -0.68
USP6NL-205ENST00000609104 SPRR3Q9UBC9 169 aa10.81□□□□□ -0.68
USP6NL-205ENST00000609104 SPATA31B1PQ5VZV4 182 aa10.81□□□□□ -0.68
USP6NL-205ENST00000609104 IGHV1-18A0A0C4DH31 117 aa10.81□□□□□ -0.68
USP6NL-205ENST00000609104 ZNF876PQ49A33 203 aa10.8□□□□□ -0.68
USP6NL-205ENST00000609104 OVOL1O14753 267 aa10.8□□□□□ -0.68
USP6NL-205ENST00000609104 ADAMTS7Q9UKP4 1686 aa10.8□□□□□ -0.68
USP6NL-205ENST00000609104 PAQR4Q8N4S7 273 aaPredicted RBP10.8□□□□□ -0.68
USP6NL-205ENST00000609104 FAM90A2PQ658T7 463 aa10.8□□□□□ -0.68
USP6NL-205ENST00000609104 TMEM219Q86XT9 240 aa10.8□□□□□ -0.68
USP6NL-205ENST00000609104 LCN12Q6JVE5 192 aa10.8□□□□□ -0.68
USP6NL-205ENST00000609104 NUP35Q8NFH5 326 aa10.8□□□□□ -0.68
USP6NL-205ENST00000609104 FGFBP3Q8TAT2 258 aa10.8□□□□□ -0.68
USP6NL-205ENST00000609104 ESDP10768 282 aa10.8□□□□□ -0.68
USP6NL-205ENST00000609104 CD5P06127 495 aa10.79□□□□□ -0.68
USP6NL-205ENST00000609104 ID3Q02535 119 aa10.79□□□□□ -0.68
USP6NL-205ENST00000609104 TRAV40A0A0B4J280 105 aa10.79□□□□□ -0.68
USP6NL-205ENST00000609104 J3QRE1 110 aa10.79□□□□□ -0.68
USP6NL-205ENST00000609104 TMEM242Q9NWH2 141 aa10.79□□□□□ -0.68
USP6NL-205ENST00000609104 FGF16O43320 207 aa10.79□□□□□ -0.68
USP6NL-205ENST00000609104 LYZL1Q6UWQ5 148 aa10.79□□□□□ -0.68
USP6NL-205ENST00000609104 RFNGQ9Y644 331 aa10.79□□□□□ -0.68
USP6NL-205ENST00000609104 MGAMO43451 1857 aa10.79□□□□□ -0.68
USP6NL-205ENST00000609104 INS-IGF2F8WCM5 200 aa10.79□□□□□ -0.68
USP6NL-205ENST00000609104 INSP01308 110 aa10.79□□□□□ -0.68
USP6NL-205ENST00000609104 TREML4Q6UXN2 200 aa10.79□□□□□ -0.68
USP6NL-205ENST00000609104 SSBP2P81877 361 aaPredicted RBP10.79□□□□□ -0.68
USP6NL-205ENST00000609104 TPTE2P1Q5T6R2 138 aa10.79□□□□□ -0.68
USP6NL-205ENST00000609104 WNT2P09544 360 aa10.79□□□□□ -0.68
USP6NL-205ENST00000609104 PSG1P11464 419 aa10.79□□□□□ -0.68
USP6NL-205ENST00000609104 COLCA2A8K830 154 aa10.79□□□□□ -0.68
USP6NL-205ENST00000609104 GFI1Q99684 422 aa10.79□□□□□ -0.68
USP6NL-205ENST00000609104 IGHV3-53P01767 116 aa10.78□□□□□ -0.68
USP6NL-205ENST00000609104 ZNF407Q9C0G0 2248 aa10.78□□□□□ -0.68
USP6NL-205ENST00000609104 FAM90A9PA6NNJ1 464 aa10.78□□□□□ -0.68
USP6NL-205ENST00000609104 NDPQ00604 133 aa10.78□□□□□ -0.68
USP6NL-205ENST00000609104 C15orf32Q32M92 178 aa10.78□□□□□ -0.68
USP6NL-205ENST00000609104 ACTL10Q5JWF8 245 aa10.78□□□□□ -0.68
USP6NL-205ENST00000609104 TMEM256Q8N2U0 113 aa10.78□□□□□ -0.68
USP6NL-205ENST00000609104 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.78□□□□□ -0.68
USP6NL-205ENST00000609104 THBDP07204 575 aa10.78□□□□□ -0.68
USP6NL-205ENST00000609104 RPL35AP18077 110 aaKnown RBP10.78□□□□□ -0.68
USP6NL-205ENST00000609104 DLX4Q92988 240 aaPredicted RBP10.78□□□□□ -0.68
USP6NL-205ENST00000609104 TMEM200BQ69YZ2 307 aa10.78□□□□□ -0.68
USP6NL-205ENST00000609104 A0A087WX48 190 aa10.78□□□□□ -0.68
USP6NL-205ENST00000609104 SMPXQ9UHP9 88 aa10.78□□□□□ -0.68
USP6NL-205ENST00000609104 C1orf194Q5T5A4 169 aa10.78□□□□□ -0.68
USP6NL-205ENST00000609104 TEX43Q6ZNM6 134 aa10.78□□□□□ -0.68
USP6NL-205ENST00000609104 MCRIP2Q9BUT9 160 aaKnown RBP10.78□□□□□ -0.68
USP6NL-205ENST00000609104 VWA8A3KMH1 1905 aa10.77□□□□□ -0.68
USP6NL-205ENST00000609104 LCNL1Q6ZST4 164 aa10.77□□□□□ -0.68
USP6NL-205ENST00000609104 AGMATQ9BSE5 352 aa10.77□□□□□ -0.68
USP6NL-205ENST00000609104 TRAV8-3A0A0A6YYJ7 113 aa10.77□□□□□ -0.69
USP6NL-205ENST00000609104 KLRD1Q13241 179 aa10.77□□□□□ -0.69
USP6NL-205ENST00000609104 VMO1Q7Z5L0 202 aa10.77□□□□□ -0.69
USP6NL-205ENST00000609104 BMPERQ8N8U9 685 aa10.77□□□□□ -0.69
USP6NL-205ENST00000609104 RLFQ13129 1914 aa10.77□□□□□ -0.69
USP6NL-205ENST00000609104 RPUSD1Q9UJJ7 312 aaKnown RBP10.77□□□□□ -0.69
USP6NL-205ENST00000609104 CSTL1Q9H114 145 aa10.77□□□□□ -0.69
USP6NL-205ENST00000609104 SMKR1H3BMG3 65 aa10.77□□□□□ -0.69
USP6NL-205ENST00000609104 SH2D1AO60880 128 aa10.77□□□□□ -0.69
USP6NL-205ENST00000609104 HGFACQ04756 655 aa10.77□□□□□ -0.69
USP6NL-205ENST00000609104 UBE2DNLQ8IWF7 75 aa10.77□□□□□ -0.69
USP6NL-205ENST00000609104 RPRMLQ8N4K4 120 aa10.77□□□□□ -0.69
USP6NL-205ENST00000609104 IGHV2-26A0A0B4J1V2 119 aa10.76□□□□□ -0.69
USP6NL-205ENST00000609104 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP10.76□□□□□ -0.69
USP6NL-205ENST00000609104 C10orf55Q5SWW7 151 aa10.76□□□□□ -0.69
USP6NL-205ENST00000609104 TRBV24-1A0A075B6N3 115 aa10.76□□□□□ -0.69
USP6NL-205ENST00000609104 WDR83OSQ9Y284 106 aa10.76□□□□□ -0.69
USP6NL-205ENST00000609104 DENND4AQ7Z401 1863 aa10.76□□□□□ -0.69
USP6NL-205ENST00000609104 ASCL4Q6XD76 172 aa10.76□□□□□ -0.69
USP6NL-205ENST00000609104 IGHV1-46P01743 117 aa10.76□□□□□ -0.69
USP6NL-205ENST00000609104 PLEKHB2Q96CS7 222 aa10.76□□□□□ -0.69
USP6NL-205ENST00000609104 TRGV1A0A0A0MS02 117 aa10.76□□□□□ -0.69
USP6NL-205ENST00000609104 ZNF138P52744 262 aa10.76□□□□□ -0.69
USP6NL-205ENST00000609104 KIR3DS1Q14943 382 aa10.76□□□□□ -0.69
USP6NL-205ENST00000609104 COX11Q9Y6N1 276 aa10.76□□□□□ -0.69
USP6NL-205ENST00000609104 DLEU1O43261 78 aa10.76□□□□□ -0.69
USP6NL-205ENST00000609104 ERCC8Q13216 396 aa10.76□□□□□ -0.69
USP6NL-205ENST00000609104 PINLYPA6NC86 204 aa10.76□□□□□ -0.69
USP6NL-205ENST00000609104 SRRM4A7MD48 611 aaKnown RBP10.76□□□□□ -0.69
USP6NL-205ENST00000609104 FCN3O75636 299 aa10.76□□□□□ -0.69
USP6NL-205ENST00000609104 RASL11AQ6T310 242 aa10.76□□□□□ -0.69
USP6NL-205ENST00000609104 SPTBN2O15020 2390 aa10.76□□□□□ -0.69
USP6NL-205ENST00000609104 LEPROTO15243 131 aa10.75□□□□□ -0.69
USP6NL-205ENST00000609104 GTF3AQ92664 365 aaKnown RBP10.75□□□□□ -0.69
USP6NL-205ENST00000609104 PSG3Q16557 428 aa10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 85.1 ms