RNA–Protein interactions for RNA: ENST00000604367.1

CCDC12-211, Transcript of coiled-coil domain containing 12, humanhuman

Gene CCDC12, Length 2,412 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC12-211ENST00000604367 CENPEQ02224 2701 aa11.85□□□□□ -0.51
CCDC12-211ENST00000604367 TRAV34A0A0B4J273 112 aa11.85□□□□□ -0.51
CCDC12-211ENST00000604367 ZNF320A2RRD8 509 aa11.85□□□□□ -0.51
CCDC12-211ENST00000604367 VWC2LB2RUY7 222 aa11.85□□□□□ -0.51
CCDC12-211ENST00000604367 NDUFS8O00217 210 aa11.85□□□□□ -0.51
CCDC12-211ENST00000604367 MGST1P10620 155 aaKnown RBP11.85□□□□□ -0.51
CCDC12-211ENST00000604367 GP9P14770 177 aa11.85□□□□□ -0.51
CCDC12-211ENST00000604367 ECSCRQ19T08 205 aa11.85□□□□□ -0.51
CCDC12-211ENST00000604367 SGK494Q96LW2 274 aa11.85□□□□□ -0.51
CCDC12-211ENST00000604367 PGPA6NDG6 321 aa11.85□□□□□ -0.51
CCDC12-211ENST00000604367 PHOX2AO14813 284 aa11.85□□□□□ -0.51
CCDC12-211ENST00000604367 TGOLN2O43493 480 aa11.85□□□□□ -0.51
CCDC12-211ENST00000604367 GATCO43716 136 aaKnown RBP11.85□□□□□ -0.51
CCDC12-211ENST00000604367 IL4P05112 153 aa11.85□□□□□ -0.51
CCDC12-211ENST00000604367 Q56UQ5 140 aa11.85□□□□□ -0.51
CCDC12-211ENST00000604367 TMEM219Q86XT9 240 aa11.85□□□□□ -0.51
CCDC12-211ENST00000604367 RNASE7Q9H1E1 156 aaKnown RBP11.85□□□□□ -0.51
CCDC12-211ENST00000604367 LY96Q9Y6Y9 160 aa11.85□□□□□ -0.51
CCDC12-211ENST00000604367 PEX7O00628 323 aa11.84□□□□□ -0.51
CCDC12-211ENST00000604367 NDUFB8O95169 186 aa11.84□□□□□ -0.51
CCDC12-211ENST00000604367 HLA-DRB1P01911 266 aa11.84□□□□□ -0.51
CCDC12-211ENST00000604367 SLC25A5P05141 298 aaKnown RBP11.84□□□□□ -0.51
CCDC12-211ENST00000604367 PCP4P48539 62 aa11.84□□□□□ -0.51
CCDC12-211ENST00000604367 IGF2BP2-AS1Q96M15 143 aa11.84□□□□□ -0.51
CCDC12-211ENST00000604367 ATP6V0E1O15342 81 aa11.84□□□□□ -0.51
CCDC12-211ENST00000604367 CNN1P51911 297 aaKnown RBP11.84□□□□□ -0.51
CCDC12-211ENST00000604367 MFAP4P55083 255 aa11.84□□□□□ -0.51
CCDC12-211ENST00000604367 FOXL1Q12952 345 aa11.84□□□□□ -0.51
CCDC12-211ENST00000604367 ZNF491Q8N8L2 437 aa11.84□□□□□ -0.51
CCDC12-211ENST00000604367 C21orf62Q9NYP8 219 aa11.84□□□□□ -0.51
CCDC12-211ENST00000604367 THYN1Q9P016 225 aa11.84□□□□□ -0.51
CCDC12-211ENST00000604367 MRPL27Q9P0M9 148 aaKnown RBP11.84□□□□□ -0.51
CCDC12-211ENST00000604367 POLQO75417 2590 aa11.83□□□□□ -0.52
CCDC12-211ENST00000604367 KMT2BQ9UMN6 2715 aaPredicted RBP11.83□□□□□ -0.52
CCDC12-211ENST00000604367 LINC01548A6NM66 108 aa11.83□□□□□ -0.52
CCDC12-211ENST00000604367 IGLV2-8P01709 118 aa11.83□□□□□ -0.52
CCDC12-211ENST00000604367 FABP1P07148 127 aa11.83□□□□□ -0.52
CCDC12-211ENST00000604367 MYCNOSP40205 109 aa11.83□□□□□ -0.52
CCDC12-211ENST00000604367 MEOX2P50222 304 aa11.83□□□□□ -0.52
CCDC12-211ENST00000604367 PDZD11Q5EBL8 140 aa11.83□□□□□ -0.52
CCDC12-211ENST00000604367 GFI1BQ5VTD9 330 aa11.83□□□□□ -0.52
CCDC12-211ENST00000604367 UNQ5815/PRO19632Q6UWF5 114 aa11.83□□□□□ -0.52
CCDC12-211ENST00000604367 RNF125Q96EQ8 232 aa11.83□□□□□ -0.52
CCDC12-211ENST00000604367 IMMP2LQ96T52 175 aa11.83□□□□□ -0.52
CCDC12-211ENST00000604367 CDC42EP3Q9UKI2 254 aa11.83□□□□□ -0.52
CCDC12-211ENST00000604367 IGHV1-69DA0A0B4J2H0 117 aa11.82□□□□□ -0.52
CCDC12-211ENST00000604367 F8W735 103 aaPredicted RBP11.82□□□□□ -0.52
CCDC12-211ENST00000604367 ISLRO14498 428 aa11.82□□□□□ -0.52
CCDC12-211ENST00000604367 TOMM40O96008 361 aa11.82□□□□□ -0.52
CCDC12-211ENST00000604367 IGHV1-69P01742 117 aa11.82□□□□□ -0.52
CCDC12-211ENST00000604367 IGHV4-38-2P0DP08 117 aa11.82□□□□□ -0.52
CCDC12-211ENST00000604367 SRSF1Q07955 248 aaKnown RBP eCLIP11.82□□□□□ -0.52
CCDC12-211ENST00000604367 BCL6BQ8N143 479 aaPredicted RBP11.82□□□□□ -0.52
CCDC12-211ENST00000604367 SOX21Q9Y651 276 aaPredicted RBP11.82□□□□□ -0.52
CCDC12-211ENST00000604367 OR2T8A6NH00 312 aa11.82□□□□□ -0.52
CCDC12-211ENST00000604367 HOXA5P20719 270 aa11.82□□□□□ -0.52
CCDC12-211ENST00000604367 FBXL7Q9UJT9 491 aa11.82□□□□□ -0.52
CCDC12-211ENST00000604367 G3V318 75 aa11.81□□□□□ -0.52
CCDC12-211ENST00000604367 FCGR2BP31994 310 aaPredicted RBP11.81□□□□□ -0.52
CCDC12-211ENST00000604367 Q9H3A6 140 aa11.81□□□□□ -0.52
CCDC12-211ENST00000604367 C7orf69Q9H7B7 122 aa11.81□□□□□ -0.52
CCDC12-211ENST00000604367 ZNF586Q9NXT0 402 aa11.81□□□□□ -0.52
CCDC12-211ENST00000604367 IL36BQ9NZH7 164 aa11.81□□□□□ -0.52
CCDC12-211ENST00000604367 EPDR1Q9UM22 224 aa11.81□□□□□ -0.52
CCDC12-211ENST00000604367 V9GYV3 84 aa11.81□□□□□ -0.52
CCDC12-211ENST00000604367 FBN2P35556 2912 aa11.81□□□□□ -0.52
CCDC12-211ENST00000604367 GCGP01275 180 aa11.81□□□□□ -0.52
CCDC12-211ENST00000604367 HIST1H1BP16401 226 aaKnown RBP11.81□□□□□ -0.52
CCDC12-211ENST00000604367 USF2Q15853 346 aaPredicted RBP11.81□□□□□ -0.52
CCDC12-211ENST00000604367 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.81□□□□□ -0.521e-9■□□□□ 10.9
CCDC12-211ENST00000604367 TRAV30A0A087WSZ9 112 aa11.8□□□□□ -0.52
CCDC12-211ENST00000604367 TYMSP04818 313 aa11.8□□□□□ -0.52
CCDC12-211ENST00000604367 MSMBP08118 114 aa11.8□□□□□ -0.52
CCDC12-211ENST00000604367 TAS2R60P59551 318 aa11.8□□□□□ -0.52
CCDC12-211ENST00000604367 IBA57Q5T440 356 aaKnown RBP11.8□□□□□ -0.52
CCDC12-211ENST00000604367 BAGE2Q86Y30 109 aa11.8□□□□□ -0.52
CCDC12-211ENST00000604367 SERTAD4Q9NUC0 356 aa11.8□□□□□ -0.52
CCDC12-211ENST00000604367 UBR5O95071 2799 aaPredicted RBP11.8□□□□□ -0.52
CCDC12-211ENST00000604367 IGHV3-35A0A0C4DH35 117 aa11.8□□□□□ -0.52
CCDC12-211ENST00000604367 PRB4P10163 310 aaPredicted RBP11.8□□□□□ -0.52
CCDC12-211ENST00000604367 COX6B1P14854 86 aa11.8□□□□□ -0.52
CCDC12-211ENST00000604367 CDX1P47902 265 aaPredicted RBP11.8□□□□□ -0.52
CCDC12-211ENST00000604367 UBE2G1P62253 170 aa11.8□□□□□ -0.52
CCDC12-211ENST00000604367 EXOC3-AS1Q8N2X6 119 aa11.8□□□□□ -0.52
CCDC12-211ENST00000604367 TMEM68Q96MH6 324 aa11.8□□□□□ -0.52
CCDC12-211ENST00000604367 SHANK2-AS3Q9BTD1 123 aa11.8□□□□□ -0.52
CCDC12-211ENST00000604367 ANKRD17O75179 2603 aaKnown RBP11.8□□□□□ -0.52
CCDC12-211ENST00000604367 IFITM10A6NMD0 228 aa11.79□□□□□ -0.52
CCDC12-211ENST00000604367 YPEL3P61236 119 aaPredicted RBP11.79□□□□□ -0.52
CCDC12-211ENST00000604367 ACTL10Q5JWF8 245 aa11.79□□□□□ -0.52
CCDC12-211ENST00000604367 PRR27Q6MZM9 219 aa11.79□□□□□ -0.52
CCDC12-211ENST00000604367 C5orf56Q8N8D9 126 aa11.79□□□□□ -0.52
CCDC12-211ENST00000604367 C17orf77Q96MU5 243 aa11.79□□□□□ -0.52
CCDC12-211ENST00000604367 USP9YO00507 2555 aaPredicted RBP11.79□□□□□ -0.52
CCDC12-211ENST00000604367 H3BRN7 92 aa11.79□□□□□ -0.52
CCDC12-211ENST00000604367 SPINK4O60575 86 aa11.79□□□□□ -0.52
CCDC12-211ENST00000604367 CA1P00915 261 aaPredicted RBP11.79□□□□□ -0.52
CCDC12-211ENST00000604367 HIST1H1EP10412 219 aaKnown RBP11.79□□□□□ -0.52
CCDC12-211ENST00000604367 RPEL1Q2QD12 228 aa11.79□□□□□ -0.52
CCDC12-211ENST00000604367 C15orf32Q32M92 178 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms