RNA–Protein interactions for RNA: ENST00000602783.1

PPFIA3-209, Transcript of PTPRF interacting protein alpha 3, humanhuman

TSL 1 (best)

Gene PPFIA3, Length 980 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA3-209ENST00000602783 SPANXN5Q5MJ07 72 aa15.33■□□□□ 0.04
PPFIA3-209ENST00000602783 COQ8AQ8NI60 647 aa15.33■□□□□ 0.04
PPFIA3-209ENST00000602783 SNRPGP15A8MWD9 76 aa15.32■□□□□ 0.04
PPFIA3-209ENST00000602783 OR4E1P0C645 316 aa15.32■□□□□ 0.04
PPFIA3-209ENST00000602783 ANXA7P20073 488 aaKnown RBP15.32■□□□□ 0.04
PPFIA3-209ENST00000602783 Q6ZTC4 211 aa15.32■□□□□ 0.04
PPFIA3-209ENST00000602783 PPP1R14BQ96C90 147 aa15.32■□□□□ 0.04
PPFIA3-209ENST00000602783 WDR12Q9GZL7 423 aaKnown RBP15.32■□□□□ 0.04
PPFIA3-209ENST00000602783 TRAV10A0A0B4J240 114 aa15.31■□□□□ 0.04
PPFIA3-209ENST00000602783 CENPXA8MT69 81 aa15.31■□□□□ 0.04
PPFIA3-209ENST00000602783 IL7P13232 177 aa15.31■□□□□ 0.04
PPFIA3-209ENST00000602783 ACOT7LQ6ZUV0 252 aa15.31■□□□□ 0.04
PPFIA3-209ENST00000602783 C7orf50Q9BRJ6 194 aaKnown RBP15.31■□□□□ 0.04
PPFIA3-209ENST00000602783 STRAPQ9Y3F4 350 aaKnown RBP15.31■□□□□ 0.04
PPFIA3-209ENST00000602783 H3BMM0 161 aa15.3■□□□□ 0.04
PPFIA3-209ENST00000602783 HLA-DRB4P13762 266 aa15.3■□□□□ 0.04
PPFIA3-209ENST00000602783 NKX2-1P43699 371 aaPredicted RBP15.3■□□□□ 0.04
PPFIA3-209ENST00000602783 NUTF2P61970 127 aaKnown RBP15.3■□□□□ 0.04
PPFIA3-209ENST00000602783 POLR2GP62487 172 aaKnown RBP eCLIP15.3■□□□□ 0.04
PPFIA3-209ENST00000602783 AKR1C1Q04828 323 aa15.3■□□□□ 0.04
PPFIA3-209ENST00000602783 C4orf46Q504U0 113 aa15.3■□□□□ 0.04
PPFIA3-209ENST00000602783 C1orf194Q5T5A4 169 aa15.3■□□□□ 0.04
PPFIA3-209ENST00000602783 OR4D5Q8NGN0 318 aa15.3■□□□□ 0.04
PPFIA3-209ENST00000602783 HLA-DRB4X5D2U9 266 aa15.3■□□□□ 0.04
PPFIA3-209ENST00000602783 SOCS3O14543 225 aa15.29■□□□□ 0.04
PPFIA3-209ENST00000602783 SSSCA1O60232 199 aa15.29■□□□□ 0.04
PPFIA3-209ENST00000602783 IFNA21P01568 189 aa15.29■□□□□ 0.04
PPFIA3-209ENST00000602783 DEFB1P60022 68 aa15.29■□□□□ 0.04
PPFIA3-209ENST00000602783 ID3Q02535 119 aa15.29■□□□□ 0.04
PPFIA3-209ENST00000602783 GSG1LQ6UXU4 331 aa15.29■□□□□ 0.04
PPFIA3-209ENST00000602783 C1QTNF4Q9BXJ3 329 aa15.29■□□□□ 0.04
PPFIA3-209ENST00000602783 XCL2Q9UBD3 114 aa15.29■□□□□ 0.04
PPFIA3-209ENST00000602783 DNAH6Q9C0G6 4158 aa15.28■□□□□ 0.04
PPFIA3-209ENST00000602783 IGHV4-4A0A075B6R2 117 aa15.28■□□□□ 0.04
PPFIA3-209ENST00000602783 CFDP00746 253 aaPredicted RBP15.28■□□□□ 0.04
PPFIA3-209ENST00000602783 ID1P41134 155 aa15.28■□□□□ 0.04
PPFIA3-209ENST00000602783 PSMB3P49720 205 aa15.28■□□□□ 0.04
PPFIA3-209ENST00000602783 GDF5OSQ5U4N7 250 aa15.28■□□□□ 0.04
PPFIA3-209ENST00000602783 OR8I2Q8N0Y5 310 aa15.28■□□□□ 0.04
PPFIA3-209ENST00000602783 LINC00052Q96N35 136 aa15.28■□□□□ 0.04
PPFIA3-209ENST00000602783 PSENENQ9NZ42 101 aa15.28■□□□□ 0.04
PPFIA3-209ENST00000602783 CELA1Q9UNI1 258 aa15.28■□□□□ 0.04
PPFIA3-209ENST00000602783 SMCO3A2RU48 225 aa15.27■□□□□ 0.04
PPFIA3-209ENST00000602783 GATA2P23769 480 aaPredicted RBP15.27■□□□□ 0.04
PPFIA3-209ENST00000602783 ZNF767PQ75MW2 155 aa15.27■□□□□ 0.04
PPFIA3-209ENST00000602783 BPIFCQ8NFQ6 507 aa15.27■□□□□ 0.04
PPFIA3-209ENST00000602783 SCGB1D2O95969 90 aa15.26■□□□□ 0.03
PPFIA3-209ENST00000602783 TMEM182Q6ZP80 229 aaPredicted RBP15.26■□□□□ 0.03
PPFIA3-209ENST00000602783 C20orf85Q9H1P6 137 aa15.26■□□□□ 0.03
PPFIA3-209ENST00000602783 SLC25A32Q9H2D1 315 aa15.26■□□□□ 0.03
PPFIA3-209ENST00000602783 SAV1Q9H4B6 383 aaPredicted RBP15.26■□□□□ 0.03
PPFIA3-209ENST00000602783 SLC25A22Q9H936 323 aa15.26■□□□□ 0.03
PPFIA3-209ENST00000602783 SLC45A2Q9UMX9 530 aa15.26■□□□□ 0.03
PPFIA3-209ENST00000602783 IGKV3-20P01619 116 aa15.25■□□□□ 0.03
PPFIA3-209ENST00000602783 ORM2P19652 201 aa15.25■□□□□ 0.03
PPFIA3-209ENST00000602783 IAH1Q2TAA2 248 aaPredicted RBP15.25■□□□□ 0.03
PPFIA3-209ENST00000602783 C12orf74Q32Q52 190 aa15.25■□□□□ 0.03
PPFIA3-209ENST00000602783 FOXI2Q6ZQN5 318 aa15.25■□□□□ 0.03
PPFIA3-209ENST00000602783 RNF126Q9BV68 326 aa15.25■□□□□ 0.03
PPFIA3-209ENST00000602783 NDUFA13Q9P0J0 144 aa15.25■□□□□ 0.03
PPFIA3-209ENST00000602783 DEFB131BA0A096LNP1 70 aa15.24■□□□□ 0.03
PPFIA3-209ENST00000602783 ZNF98A6NK75 572 aa15.24■□□□□ 0.03
PPFIA3-209ENST00000602783 PMS2P5A8MQ11 134 aa15.24■□□□□ 0.03
PPFIA3-209ENST00000602783 CCNKO75909 580 aa15.24■□□□□ 0.03
PPFIA3-209ENST00000602783 GALR1P47211 349 aa15.24■□□□□ 0.03
PPFIA3-209ENST00000602783 TMEM144Q7Z5S9 345 aa15.24■□□□□ 0.03
PPFIA3-209ENST00000602783 OR1B1Q8NGR6 318 aa15.24■□□□□ 0.03
PPFIA3-209ENST00000602783 MITD1Q8WV92 249 aa15.24■□□□□ 0.03
PPFIA3-209ENST00000602783 SMIM8Q96KF7 97 aa15.24■□□□□ 0.03
PPFIA3-209ENST00000602783 TMEM147Q9BVK8 224 aa15.24■□□□□ 0.03
PPFIA3-209ENST00000602783 ISLRO14498 428 aa15.23■□□□□ 0.03
PPFIA3-209ENST00000602783 PLA2G10O15496 165 aa15.23■□□□□ 0.03
PPFIA3-209ENST00000602783 LYRM1O43325 122 aa15.23■□□□□ 0.03
PPFIA3-209ENST00000602783 PAX9P55771 341 aa15.23■□□□□ 0.03
PPFIA3-209ENST00000602783 FXYD7P58549 80 aa15.23■□□□□ 0.03
PPFIA3-209ENST00000602783 RRAS2P62070 204 aaPredicted RBP15.23■□□□□ 0.03
PPFIA3-209ENST00000602783 CNPY1Q3B7I2 92 aa15.23■□□□□ 0.03
PPFIA3-209ENST00000602783 CYP2G1PQ6ZSU1 146 aa15.23■□□□□ 0.03
PPFIA3-209ENST00000602783 ZBTB8BQ8NAP8 495 aaPredicted RBP15.23■□□□□ 0.03
PPFIA3-209ENST00000602783 DOK5Q9P104 306 aa15.23■□□□□ 0.03
PPFIA3-209ENST00000602783 HERC2O95714 4834 aa15.22■□□□□ 0.03
PPFIA3-209ENST00000602783 METTL15P1P0C7V9 234 aa15.22■□□□□ 0.03
PPFIA3-209ENST00000602783 MEOX2P50222 304 aa15.22■□□□□ 0.03
PPFIA3-209ENST00000602783 SAMD13Q5VXD3 122 aa15.22■□□□□ 0.03
PPFIA3-209ENST00000602783 TMEM14EPQ6UXP3 125 aa15.22■□□□□ 0.03
PPFIA3-209ENST00000602783 C16orf92Q96LL3 132 aa15.22■□□□□ 0.03
PPFIA3-209ENST00000602783 SCRT1Q9BWW7 348 aa15.22■□□□□ 0.03
PPFIA3-209ENST00000602783 RCL1Q9Y2P8 373 aaKnown RBP15.22■□□□□ 0.03
PPFIA3-209ENST00000602783 F6UB75 175 aa15.21■□□□□ 0.03
PPFIA3-209ENST00000602783 IL5P05113 134 aa15.21■□□□□ 0.03
PPFIA3-209ENST00000602783 ZNF705AQ6ZN79 300 aaPredicted RBP15.21■□□□□ 0.03
PPFIA3-209ENST00000602783 OR4B1Q8NGF8 309 aa15.21■□□□□ 0.03
PPFIA3-209ENST00000602783 C20orf173Q96LM9 149 aa15.21■□□□□ 0.03
PPFIA3-209ENST00000602783 C17orf77Q96MU5 243 aa15.21■□□□□ 0.03
PPFIA3-209ENST00000602783 RSG1Q9BU20 258 aa15.21■□□□□ 0.03
PPFIA3-209ENST00000602783 GSKIPQ9P0R6 139 aa15.21■□□□□ 0.03
PPFIA3-209ENST00000602783 H3BRN7 92 aa15.2■□□□□ 0.02
PPFIA3-209ENST00000602783 CCSO14618 274 aa15.2■□□□□ 0.02
PPFIA3-209ENST00000602783 DLK1P80370 383 aa15.2■□□□□ 0.02
PPFIA3-209ENST00000602783 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa15.2■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms