RNA–Protein interactions for RNA: ENST00000602574.5

COMMD3-215, Transcript of COMM domain containing 3, humanhuman

TSL 1 (best)

Gene COMMD3, Length 2,290 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-215ENST00000602574 TRAV13-1A0A0B4J241 112 aa7.1□□□□□ -1.27
COMMD3-215ENST00000602574 CHEK1O14757 476 aa7.1□□□□□ -1.27
COMMD3-215ENST00000602574 ZFAND5O76080 213 aa7.1□□□□□ -1.27
COMMD3-215ENST00000602574 IGKCP01834 107 aa7.1□□□□□ -1.27
COMMD3-215ENST00000602574 CISD3P0C7P0 127 aa7.1□□□□□ -1.27
COMMD3-215ENST00000602574 P0DMU3 169 aa7.1□□□□□ -1.27
COMMD3-215ENST00000602574 FAM231AP0DMU4 169 aa7.1□□□□□ -1.27
COMMD3-215ENST00000602574 FAM231CP0DMU5 169 aa7.1□□□□□ -1.27
COMMD3-215ENST00000602574 CXCL5P42830 114 aa7.1□□□□□ -1.27
COMMD3-215ENST00000602574 PSMB2P49721 201 aa7.1□□□□□ -1.27
COMMD3-215ENST00000602574 DGAT2L6Q6ZPD8 337 aa7.1□□□□□ -1.27
COMMD3-215ENST00000602574 ZNF441Q8N8Z8 693 aa7.1□□□□□ -1.27
COMMD3-215ENST00000602574 IGF2BP2-AS1Q96M15 143 aa7.1□□□□□ -1.27
COMMD3-215ENST00000602574 SHANK2-AS3Q9BTD1 123 aa7.1□□□□□ -1.27
COMMD3-215ENST00000602574 AICDAQ9GZX7 198 aa7.1□□□□□ -1.27
COMMD3-215ENST00000602574 AGPAT4-IT1Q9H0P7 198 aa7.1□□□□□ -1.27
COMMD3-215ENST00000602574 ARID1AO14497 2285 aa7.09□□□□□ -1.27
COMMD3-215ENST00000602574 IGLV1-36A0A0B4J1U3 117 aa7.09□□□□□ -1.27
COMMD3-215ENST00000602574 CDX4O14627 284 aaPredicted RBP7.09□□□□□ -1.27
COMMD3-215ENST00000602574 NDUFC2O95298 119 aa7.09□□□□□ -1.27
COMMD3-215ENST00000602574 ARL14EPLP0DKL9 152 aa7.09□□□□□ -1.27
COMMD3-215ENST00000602574 SSR4P51571 173 aa7.09□□□□□ -1.27
COMMD3-215ENST00000602574 CD164Q04900 197 aa7.09□□□□□ -1.27
COMMD3-215ENST00000602574 C4orf48Q5BLP8 95 aa7.09□□□□□ -1.27
COMMD3-215ENST00000602574 CT83Q5H943 113 aa7.09□□□□□ -1.27
COMMD3-215ENST00000602574 MBD3L2Q8NHZ7 208 aaPredicted RBP7.09□□□□□ -1.27
COMMD3-215ENST00000602574 TMEM190Q8WZ59 177 aa7.09□□□□□ -1.27
COMMD3-215ENST00000602574 ZNF414Q96IQ9 312 aa7.09□□□□□ -1.27
COMMD3-215ENST00000602574 Q96M66 194 aa7.09□□□□□ -1.27
COMMD3-215ENST00000602574 STARD5Q9NSY2 213 aa7.09□□□□□ -1.27
COMMD3-215ENST00000602574 RNF181Q9P0P0 153 aa7.09□□□□□ -1.27
COMMD3-215ENST00000602574 FAM90A23PA8MXZ1 464 aa7.08□□□□□ -1.28
COMMD3-215ENST00000602574 FAM90A15PP0C7V4 464 aa7.08□□□□□ -1.28
COMMD3-215ENST00000602574 FAM90A13PP0C7W8 464 aa7.08□□□□□ -1.28
COMMD3-215ENST00000602574 FAM90A14PP0C7W9 464 aa7.08□□□□□ -1.28
COMMD3-215ENST00000602574 FAM90A24PP0C7X0 464 aa7.08□□□□□ -1.28
COMMD3-215ENST00000602574 CCL1P22362 96 aa7.08□□□□□ -1.28
COMMD3-215ENST00000602574 FAM27E3Q08E93 113 aa7.08□□□□□ -1.28
COMMD3-215ENST00000602574 FXYD3Q14802 87 aa7.08□□□□□ -1.28
COMMD3-215ENST00000602574 MARCH3Q86UD3 253 aa7.08□□□□□ -1.28
COMMD3-215ENST00000602574 TRGV9Q99603 122 aa7.08□□□□□ -1.28
COMMD3-215ENST00000602574 FAM173AQ9BQD7 235 aa7.08□□□□□ -1.28
COMMD3-215ENST00000602574 IGHV3OR15-7A0A075B7D8 119 aa7.08□□□□□ -1.28
COMMD3-215ENST00000602574 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP7.08□□□□□ -1.28
COMMD3-215ENST00000602574 PMS2P5A8MQ11 134 aa7.08□□□□□ -1.28
COMMD3-215ENST00000602574 LGALS9O00182 355 aa7.08□□□□□ -1.28
COMMD3-215ENST00000602574 ATOX1O00244 68 aa7.08□□□□□ -1.28
COMMD3-215ENST00000602574 NXPH3O95157 252 aa7.08□□□□□ -1.28
COMMD3-215ENST00000602574 GLI4P10075 376 aa7.08□□□□□ -1.28
COMMD3-215ENST00000602574 WT1P19544 449 aaPredicted RBP7.08□□□□□ -1.28
COMMD3-215ENST00000602574 COL8A2P25067 703 aa7.08□□□□□ -1.28
COMMD3-215ENST00000602574 RPS27P42677 84 aaKnown RBP7.08□□□□□ -1.28
COMMD3-215ENST00000602574 SLC25A45Q8N413 288 aa7.08□□□□□ -1.28
COMMD3-215ENST00000602574 Q8N7P7 452 aa7.08□□□□□ -1.28
COMMD3-215ENST00000602574 FAM19A4Q96LR4 140 aa7.08□□□□□ -1.28
COMMD3-215ENST00000602574 WDR83OSQ9Y284 106 aa7.08□□□□□ -1.28
COMMD3-215ENST00000602574 ATG2BQ96BY7 2078 aa7.07□□□□□ -1.28
COMMD3-215ENST00000602574 SLC25A20O43772 301 aa7.07□□□□□ -1.28
COMMD3-215ENST00000602574 PF4P02776 101 aa7.07□□□□□ -1.28
COMMD3-215ENST00000602574 CRYGSP22914 178 aa7.07□□□□□ -1.28
COMMD3-215ENST00000602574 TNFRSF4P43489 277 aa7.07□□□□□ -1.28
COMMD3-215ENST00000602574 UBE2D1P51668 147 aa7.07□□□□□ -1.28
COMMD3-215ENST00000602574 DEFB121Q5J5C9 76 aa7.07□□□□□ -1.28
COMMD3-215ENST00000602574 TMEM170BQ5T4T1 132 aa7.07□□□□□ -1.28
COMMD3-215ENST00000602574 Q8N1Y9 231 aa7.07□□□□□ -1.28
COMMD3-215ENST00000602574 BEX4Q9NWD9 120 aaPredicted RBP7.07□□□□□ -1.28
COMMD3-215ENST00000602574 OCIAD1Q9NX40 245 aa7.07□□□□□ -1.28
COMMD3-215ENST00000602574 TRAV17A0A0B4J275 112 aa7.07□□□□□ -1.28
COMMD3-215ENST00000602574 C19orf71A6NCJ1 209 aa7.07□□□□□ -1.28
COMMD3-215ENST00000602574 LTAP01374 205 aa7.07□□□□□ -1.28
COMMD3-215ENST00000602574 APOHP02749 345 aaPredicted RBP7.07□□□□□ -1.28
COMMD3-215ENST00000602574 ACYP1P07311 99 aa7.07□□□□□ -1.28
COMMD3-215ENST00000602574 IAPPP10997 89 aa7.07□□□□□ -1.28
COMMD3-215ENST00000602574 CACNG7P62955 275 aa7.07□□□□□ -1.28
COMMD3-215ENST00000602574 OR1C1Q15619 314 aa7.07□□□□□ -1.28
COMMD3-215ENST00000602574 Q6ZR03 302 aa7.07□□□□□ -1.28
COMMD3-215ENST00000602574 HDHD3Q9BSH5 251 aaPredicted RBP7.07□□□□□ -1.28
COMMD3-215ENST00000602574 MRPL20Q9BYC9 149 aaKnown RBP7.07□□□□□ -1.28
COMMD3-215ENST00000602574 GFRA4Q9GZZ7 299 aa7.07□□□□□ -1.28
COMMD3-215ENST00000602574 TRGV11A0A075B6L2 103 aa7.06□□□□□ -1.28
COMMD3-215ENST00000602574 IGKV1-8A0A0C4DH67 115 aa7.06□□□□□ -1.28
COMMD3-215ENST00000602574 A0A0G2JRQ6 117 aa7.06□□□□□ -1.28
COMMD3-215ENST00000602574 CLDN14O95500 239 aa7.06□□□□□ -1.28
COMMD3-215ENST00000602574 SPANXN5Q5MJ07 72 aa7.06□□□□□ -1.28
COMMD3-215ENST00000602574 Q6ZSR3 168 aa7.06□□□□□ -1.28
COMMD3-215ENST00000602574 IFI27L1Q96BM0 104 aa7.06□□□□□ -1.28
COMMD3-215ENST00000602574 BMFQ96LC9 184 aa7.06□□□□□ -1.28
COMMD3-215ENST00000602574 PRRG4Q9BZD6 226 aa7.06□□□□□ -1.28
COMMD3-215ENST00000602574 TMEM167BQ9NRX6 74 aa7.06□□□□□ -1.28
COMMD3-215ENST00000602574 COX6A1P12074 109 aa7.06□□□□□ -1.28
COMMD3-215ENST00000602574 EFNA4P52798 201 aa7.06□□□□□ -1.28
COMMD3-215ENST00000602574 HIST1H4AP62805 103 aaKnown RBP7.06□□□□□ -1.28
COMMD3-215ENST00000602574 TFF3Q07654 80 aa7.06□□□□□ -1.28
COMMD3-215ENST00000602574 CCL14Q16627 93 aa7.06□□□□□ -1.28
COMMD3-215ENST00000602574 FAM90A1Q86YD7 464 aa7.06□□□□□ -1.28
COMMD3-215ENST00000602574 C11orf53Q8IXP5 236 aa7.06□□□□□ -1.28
COMMD3-215ENST00000602574 VKORC1Q9BQB6 163 aa7.06□□□□□ -1.28
COMMD3-215ENST00000602574 ZNF256Q9Y2P7 627 aaPredicted RBP7.06□□□□□ -1.28
COMMD3-215ENST00000602574 TCF20Q9UGU0 1960 aaKnown RBP7.06□□□□□ -1.28
COMMD3-215ENST00000602574 MUC22E2RYF6 1773 aaPredicted RBP7.05□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms