RNA–Protein interactions for RNA: ENST00000598159.6

SSBP4-205, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 3

Gene SSBP4, Length 747 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-205ENST00000598159 HLA-DRB4X5D2U9 266 aa16.69■□□□□ 0.26
SSBP4-205ENST00000598159 X6R8D5 127 aa16.69■□□□□ 0.26
SSBP4-205ENST00000598159 PSMB3P49720 205 aa16.68■□□□□ 0.26
SSBP4-205ENST00000598159 POLR2GP62487 172 aaKnown RBP eCLIP16.68■□□□□ 0.26
SSBP4-205ENST00000598159 C4orf46Q504U0 113 aa16.68■□□□□ 0.26
SSBP4-205ENST00000598159 SAMD13Q5VXD3 122 aa16.68■□□□□ 0.26
SSBP4-205ENST00000598159 TMEM144Q7Z5S9 345 aa16.68■□□□□ 0.26
SSBP4-205ENST00000598159 BPIFCQ8NFQ6 507 aa16.68■□□□□ 0.26
SSBP4-205ENST00000598159 SMIM8Q96KF7 97 aa16.68■□□□□ 0.26
SSBP4-205ENST00000598159 LINC00052Q96N35 136 aa16.68■□□□□ 0.26
SSBP4-205ENST00000598159 WDR12Q9GZL7 423 aaKnown RBP16.68■□□□□ 0.26
SSBP4-205ENST00000598159 ALMS1Q8TCU4 4167 aa16.67■□□□□ 0.26
SSBP4-205ENST00000598159 C11orf94C9JXX5 98 aa16.67■□□□□ 0.26
SSBP4-205ENST00000598159 H3BP45 60 aa16.67■□□□□ 0.26
SSBP4-205ENST00000598159 IL7P13232 177 aa16.67■□□□□ 0.26
SSBP4-205ENST00000598159 ANXA7P20073 488 aaKnown RBP16.67■□□□□ 0.26
SSBP4-205ENST00000598159 BTCP35070 178 aa16.67■□□□□ 0.26
SSBP4-205ENST00000598159 AKR1C1Q04828 323 aa16.67■□□□□ 0.26
SSBP4-205ENST00000598159 C2CD4CQ8TF44 421 aa16.67■□□□□ 0.26
SSBP4-205ENST00000598159 SOCS3O14543 225 aa16.66■□□□□ 0.26
SSBP4-205ENST00000598159 TCTAP57738 103 aa16.66■□□□□ 0.26
SSBP4-205ENST00000598159 LGALS9CQ6DKI2 356 aa16.66■□□□□ 0.26
SSBP4-205ENST00000598159 CLUHP3Q96NS8 147 aa16.66■□□□□ 0.26
SSBP4-205ENST00000598159 SAV1Q9H4B6 383 aaPredicted RBP16.66■□□□□ 0.26
SSBP4-205ENST00000598159 XCL2Q9UBD3 114 aa16.66■□□□□ 0.26
SSBP4-205ENST00000598159 EPPK1P58107 5090 aaKnown RBP16.65■□□□□ 0.26
SSBP4-205ENST00000598159 ZNF98A6NK75 572 aa16.65■□□□□ 0.26
SSBP4-205ENST00000598159 ISLRO14498 428 aa16.65■□□□□ 0.26
SSBP4-205ENST00000598159 GALR1P47211 349 aa16.65■□□□□ 0.26
SSBP4-205ENST00000598159 MEOX2P50222 304 aa16.65■□□□□ 0.26
SSBP4-205ENST00000598159 SPATA31B1PQ5VZV4 182 aa16.65■□□□□ 0.26
SSBP4-205ENST00000598159 FOXI2Q6ZQN5 318 aa16.65■□□□□ 0.26
SSBP4-205ENST00000598159 ACOT7LQ6ZUV0 252 aa16.65■□□□□ 0.26
SSBP4-205ENST00000598159 ORM2P19652 201 aa16.64■□□□□ 0.25
SSBP4-205ENST00000598159 GATA2P23769 480 aaPredicted RBP16.64■□□□□ 0.25
SSBP4-205ENST00000598159 GDF5OSQ5U4N7 250 aa16.64■□□□□ 0.25
SSBP4-205ENST00000598159 TMEM182Q6ZP80 229 aaPredicted RBP16.64■□□□□ 0.25
SSBP4-205ENST00000598159 MITD1Q8WV92 249 aa16.64■□□□□ 0.25
SSBP4-205ENST00000598159 TMEM147Q9BVK8 224 aa16.64■□□□□ 0.25
SSBP4-205ENST00000598159 ELOA3CA0A087WX78 387 aaPredicted RBP16.63■□□□□ 0.25
SSBP4-205ENST00000598159 PMS2P5A8MQ11 134 aa16.63■□□□□ 0.25
SSBP4-205ENST00000598159 IAH1Q2TAA2 248 aaPredicted RBP16.63■□□□□ 0.25
SSBP4-205ENST00000598159 GPR82Q96P67 336 aa16.63■□□□□ 0.25
SSBP4-205ENST00000598159 SLC25A22Q9H936 323 aa16.63■□□□□ 0.25
SSBP4-205ENST00000598159 SMCO3A2RU48 225 aa16.62■□□□□ 0.25
SSBP4-205ENST00000598159 PLA2G10O15496 165 aa16.62■□□□□ 0.25
SSBP4-205ENST00000598159 SSSCA1O60232 199 aa16.62■□□□□ 0.25
SSBP4-205ENST00000598159 HLA-DMBP28068 263 aa16.62■□□□□ 0.25
SSBP4-205ENST00000598159 PAX9P55771 341 aa16.62■□□□□ 0.25
SSBP4-205ENST00000598159 TAS2R30P59541 319 aa16.62■□□□□ 0.25
SSBP4-205ENST00000598159 EBLN2Q6P2I7 272 aa16.62■□□□□ 0.25
SSBP4-205ENST00000598159 CYP2G1PQ6ZSU1 146 aa16.62■□□□□ 0.25
SSBP4-205ENST00000598159 OR1B1Q8NGR6 318 aa16.62■□□□□ 0.25
SSBP4-205ENST00000598159 C16orf92Q96LL3 132 aa16.62■□□□□ 0.25
SSBP4-205ENST00000598159 RSG1Q9BU20 258 aa16.62■□□□□ 0.25
SSBP4-205ENST00000598159 LYRM1O43325 122 aa16.61■□□□□ 0.25
SSBP4-205ENST00000598159 IL5P05113 134 aa16.61■□□□□ 0.25
SSBP4-205ENST00000598159 DLK1P80370 383 aa16.61■□□□□ 0.25
SSBP4-205ENST00000598159 TMEM14EPQ6UXP3 125 aa16.61■□□□□ 0.25
SSBP4-205ENST00000598159 ZBTB8BQ8NAP8 495 aaPredicted RBP16.61■□□□□ 0.25
SSBP4-205ENST00000598159 OR10P1Q8NGE3 313 aa16.61■□□□□ 0.25
SSBP4-205ENST00000598159 NEU1Q99519 415 aa16.61■□□□□ 0.25
SSBP4-205ENST00000598159 SLC25A32Q9H2D1 315 aa16.61■□□□□ 0.25
SSBP4-205ENST00000598159 NPVFQ9HCQ7 196 aa16.61■□□□□ 0.25
SSBP4-205ENST00000598159 RPRMQ9NS64 109 aa16.61■□□□□ 0.25
SSBP4-205ENST00000598159 GSKIPQ9P0R6 139 aa16.61■□□□□ 0.25
SSBP4-205ENST00000598159 SMIM9A6NGZ8 99 aa16.6■□□□□ 0.25
SSBP4-205ENST00000598159 FNDC10F2Z333 226 aa16.6■□□□□ 0.25
SSBP4-205ENST00000598159 IGKV3-20P01619 116 aa16.6■□□□□ 0.25
SSBP4-205ENST00000598159 DEFB1P60022 68 aa16.6■□□□□ 0.25
SSBP4-205ENST00000598159 SELENOTP62341 195 aa16.6■□□□□ 0.25
SSBP4-205ENST00000598159 ZNF705AQ6ZN79 300 aaPredicted RBP16.6■□□□□ 0.25
SSBP4-205ENST00000598159 OR4B1Q8NGF8 309 aa16.6■□□□□ 0.25
SSBP4-205ENST00000598159 IGLL5B9A064 214 aa16.59■□□□□ 0.25
SSBP4-205ENST00000598159 TSC22D2O75157 780 aa16.59■□□□□ 0.25
SSBP4-205ENST00000598159 SCGB1D2O95969 90 aa16.59■□□□□ 0.25
SSBP4-205ENST00000598159 PLP1P60201 277 aa16.59■□□□□ 0.25
SSBP4-205ENST00000598159 S100A7AQ86SG5 101 aa16.59■□□□□ 0.25
SSBP4-205ENST00000598159 C20orf85Q9H1P6 137 aa16.59■□□□□ 0.25
SSBP4-205ENST00000598159 TRAV10A0A0B4J240 114 aa16.58■□□□□ 0.24
SSBP4-205ENST00000598159 HYPMO75409 117 aa16.58■□□□□ 0.24
SSBP4-205ENST00000598159 TCRBP04435 133 aa16.58■□□□□ 0.24
SSBP4-205ENST00000598159 METTL15P1P0C7V9 234 aa16.58■□□□□ 0.24
SSBP4-205ENST00000598159 RAP2BP61225 183 aa16.58■□□□□ 0.24
SSBP4-205ENST00000598159 PSG9Q00887 426 aa16.58■□□□□ 0.24
SSBP4-205ENST00000598159 SLC25A39Q9BZJ4 359 aaPredicted RBP16.58■□□□□ 0.24
SSBP4-205ENST00000598159 APLNQ9ULZ1 77 aa16.58■□□□□ 0.24
SSBP4-205ENST00000598159 A0A0J9YX75 114 aa16.57■□□□□ 0.24
SSBP4-205ENST00000598159 ZNF705FA8MVS1 300 aaPredicted RBP16.57■□□□□ 0.24
SSBP4-205ENST00000598159 CCNKO75909 580 aa16.57■□□□□ 0.24
SSBP4-205ENST00000598159 ZNF705DP0CH99 300 aaPredicted RBP16.57■□□□□ 0.24
SSBP4-205ENST00000598159 ZNF705BP0CI00 300 aaPredicted RBP16.57■□□□□ 0.24
SSBP4-205ENST00000598159 FXYD7P58549 80 aa16.57■□□□□ 0.24
SSBP4-205ENST00000598159 RRAS2P62070 204 aaPredicted RBP16.57■□□□□ 0.24
SSBP4-205ENST00000598159 FAM78BQ5VT40 261 aa16.57■□□□□ 0.24
SSBP4-205ENST00000598159 GSG1LQ6UXU4 331 aa16.57■□□□□ 0.24
SSBP4-205ENST00000598159 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa16.57■□□□□ 0.24
SSBP4-205ENST00000598159 Q6ZTC4 211 aa16.57■□□□□ 0.24
SSBP4-205ENST00000598159 C17orf77Q96MU5 243 aa16.57■□□□□ 0.24
SSBP4-205ENST00000598159 MGAT4CQ9UBM8 478 aa16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms