RNA–Protein interactions for RNA: ENST00000594828.7

LSM4-204, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM4, Length 807 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-204ENST00000594828 POLR2GP62487 172 aaKnown RBP eCLIP17■□□□□ 0.31
LSM4-204ENST00000594828 XCL2Q9UBD3 114 aa17■□□□□ 0.31
LSM4-204ENST00000594828 HLA-DRB4X5D2U9 266 aa17■□□□□ 0.31
LSM4-204ENST00000594828 PSMB3P49720 205 aa16.99■□□□□ 0.31
LSM4-204ENST00000594828 AKR1C1Q04828 323 aa16.99■□□□□ 0.31
LSM4-204ENST00000594828 LGALS9CQ6DKI2 356 aa16.99■□□□□ 0.31
LSM4-204ENST00000594828 C7orf50Q9BRJ6 194 aaKnown RBP16.99■□□□□ 0.31
LSM4-204ENST00000594828 C11orf94C9JXX5 98 aa16.98■□□□□ 0.31
LSM4-204ENST00000594828 ANXA7P20073 488 aaKnown RBP16.98■□□□□ 0.31
LSM4-204ENST00000594828 C4orf46Q504U0 113 aa16.98■□□□□ 0.31
LSM4-204ENST00000594828 GDF5OSQ5U4N7 250 aa16.98■□□□□ 0.31
LSM4-204ENST00000594828 BPIFCQ8NFQ6 507 aa16.98■□□□□ 0.31
LSM4-204ENST00000594828 PSENENQ9NZ42 101 aa16.98■□□□□ 0.31
LSM4-204ENST00000594828 ELOA3CA0A087WX78 387 aaPredicted RBP16.97■□□□□ 0.31
LSM4-204ENST00000594828 SOCS3O14543 225 aa16.97■□□□□ 0.31
LSM4-204ENST00000594828 IL7P13232 177 aa16.97■□□□□ 0.31
LSM4-204ENST00000594828 GATA2P23769 480 aaPredicted RBP16.97■□□□□ 0.31
LSM4-204ENST00000594828 HLA-DMBP28068 263 aa16.97■□□□□ 0.31
LSM4-204ENST00000594828 BTCP35070 178 aa16.97■□□□□ 0.31
LSM4-204ENST00000594828 DEFB1P60022 68 aa16.97■□□□□ 0.31
LSM4-204ENST00000594828 FOXI2Q6ZQN5 318 aa16.97■□□□□ 0.31
LSM4-204ENST00000594828 ACOT7LQ6ZUV0 252 aa16.97■□□□□ 0.31
LSM4-204ENST00000594828 OR4D5Q8NGN0 318 aa16.97■□□□□ 0.31
LSM4-204ENST00000594828 SAV1Q9H4B6 383 aaPredicted RBP16.97■□□□□ 0.31
LSM4-204ENST00000594828 SLC45A2Q9UMX9 530 aa16.97■□□□□ 0.31
LSM4-204ENST00000594828 IGKV3-20P01619 116 aa16.96■□□□□ 0.31
LSM4-204ENST00000594828 ORM2P19652 201 aa16.96■□□□□ 0.31
LSM4-204ENST00000594828 TCTAP57738 103 aa16.96■□□□□ 0.31
LSM4-204ENST00000594828 GSG1LQ6UXU4 331 aa16.96■□□□□ 0.31
LSM4-204ENST00000594828 TMEM182Q6ZP80 229 aaPredicted RBP16.96■□□□□ 0.31
LSM4-204ENST00000594828 SLC25A22Q9H936 323 aa16.96■□□□□ 0.31
LSM4-204ENST00000594828 ZNF98A6NK75 572 aa16.95■□□□□ 0.3
LSM4-204ENST00000594828 IGLL5B9A064 214 aa16.95■□□□□ 0.3
LSM4-204ENST00000594828 ISLRO14498 428 aa16.95■□□□□ 0.3
LSM4-204ENST00000594828 SSSCA1O60232 199 aa16.95■□□□□ 0.3
LSM4-204ENST00000594828 GALR1P47211 349 aa16.95■□□□□ 0.3
LSM4-204ENST00000594828 SAMD13Q5VXD3 122 aa16.95■□□□□ 0.3
LSM4-204ENST00000594828 TMEM144Q7Z5S9 345 aa16.95■□□□□ 0.3
LSM4-204ENST00000594828 SMIM8Q96KF7 97 aa16.95■□□□□ 0.3
LSM4-204ENST00000594828 SMCO3A2RU48 225 aa16.94■□□□□ 0.3
LSM4-204ENST00000594828 S100A7P31151 101 aa16.94■□□□□ 0.3
LSM4-204ENST00000594828 MEOX2P50222 304 aa16.94■□□□□ 0.3
LSM4-204ENST00000594828 CNPY1Q3B7I2 92 aa16.94■□□□□ 0.3
LSM4-204ENST00000594828 SPATA31B1PQ5VZV4 182 aa16.94■□□□□ 0.3
LSM4-204ENST00000594828 OR1B1Q8NGR6 318 aa16.94■□□□□ 0.3
LSM4-204ENST00000594828 TMEM147Q9BVK8 224 aa16.94■□□□□ 0.3
LSM4-204ENST00000594828 SLC25A32Q9H2D1 315 aa16.94■□□□□ 0.3
LSM4-204ENST00000594828 FXYD7P58549 80 aa16.93■□□□□ 0.3
LSM4-204ENST00000594828 IAH1Q2TAA2 248 aaPredicted RBP16.93■□□□□ 0.3
LSM4-204ENST00000594828 EBLN2Q6P2I7 272 aa16.93■□□□□ 0.3
LSM4-204ENST00000594828 Q6ZTC4 211 aa16.93■□□□□ 0.3
LSM4-204ENST00000594828 RPP25LQ8N5L8 163 aaKnown RBP16.93■□□□□ 0.3
LSM4-204ENST00000594828 OR4B1Q8NGF8 309 aa16.93■□□□□ 0.3
LSM4-204ENST00000594828 C16orf92Q96LL3 132 aa16.93■□□□□ 0.3
LSM4-204ENST00000594828 CLUHP3Q96NS8 147 aa16.93■□□□□ 0.3
LSM4-204ENST00000594828 RSG1Q9BU20 258 aa16.93■□□□□ 0.3
LSM4-204ENST00000594828 NDUFA13Q9P0J0 144 aa16.93■□□□□ 0.3
LSM4-204ENST00000594828 PMS2P5A8MQ11 134 aa16.92■□□□□ 0.3
LSM4-204ENST00000594828 DEDDO75618 318 aa16.92■□□□□ 0.3
LSM4-204ENST00000594828 IL5P05113 134 aa16.92■□□□□ 0.3
LSM4-204ENST00000594828 PAX9P55771 341 aa16.92■□□□□ 0.3
LSM4-204ENST00000594828 ZNF705AQ6ZN79 300 aaPredicted RBP16.92■□□□□ 0.3
LSM4-204ENST00000594828 CYP2G1PQ6ZSU1 146 aa16.92■□□□□ 0.3
LSM4-204ENST00000594828 MITD1Q8WV92 249 aa16.92■□□□□ 0.3
LSM4-204ENST00000594828 GPR82Q96P67 336 aa16.92■□□□□ 0.3
LSM4-204ENST00000594828 RPRMQ9NS64 109 aa16.92■□□□□ 0.3
LSM4-204ENST00000594828 BIRC6Q9NR09 4857 aa16.92■□□□□ 0.3
LSM4-204ENST00000594828 TRAV10A0A0B4J240 114 aa16.91■□□□□ 0.3
LSM4-204ENST00000594828 SCGB1D2O95969 90 aa16.91■□□□□ 0.3
LSM4-204ENST00000594828 GSKIPQ9P0R6 139 aa16.91■□□□□ 0.3
LSM4-204ENST00000594828 APLNQ9ULZ1 77 aa16.91■□□□□ 0.3
LSM4-204ENST00000594828 CELA1Q9UNI1 258 aa16.91■□□□□ 0.3
LSM4-204ENST00000594828 F6UB75 175 aa16.9■□□□□ 0.3
LSM4-204ENST00000594828 PLA2G10O15496 165 aa16.9■□□□□ 0.3
LSM4-204ENST00000594828 FAM78BQ5VT40 261 aa16.9■□□□□ 0.3
LSM4-204ENST00000594828 TMEM14EPQ6UXP3 125 aa16.9■□□□□ 0.3
LSM4-204ENST00000594828 ZNF709Q8N972 641 aa16.9■□□□□ 0.3
LSM4-204ENST00000594828 C20orf173Q96LM9 149 aa16.9■□□□□ 0.3
LSM4-204ENST00000594828 NEU1Q99519 415 aa16.9■□□□□ 0.3
LSM4-204ENST00000594828 IGHV3OR16-12A0A075B7B8 117 aa16.89■□□□□ 0.29
LSM4-204ENST00000594828 A0A0J9YX75 114 aa16.89■□□□□ 0.29
LSM4-204ENST00000594828 ZNF705FA8MVS1 300 aaPredicted RBP16.89■□□□□ 0.29
LSM4-204ENST00000594828 CCNKO75909 580 aa16.89■□□□□ 0.29
LSM4-204ENST00000594828 METTL15P1P0C7V9 234 aa16.89■□□□□ 0.29
LSM4-204ENST00000594828 ZNF705DP0CH99 300 aaPredicted RBP16.89■□□□□ 0.29
LSM4-204ENST00000594828 ZNF705BP0CI00 300 aaPredicted RBP16.89■□□□□ 0.29
LSM4-204ENST00000594828 RAP2BP61225 183 aa16.89■□□□□ 0.29
LSM4-204ENST00000594828 RRAS2P62070 204 aaPredicted RBP16.89■□□□□ 0.29
LSM4-204ENST00000594828 DLK1P80370 383 aa16.89■□□□□ 0.29
LSM4-204ENST00000594828 PSG9Q00887 426 aa16.89■□□□□ 0.29
LSM4-204ENST00000594828 C12orf74Q32Q52 190 aa16.89■□□□□ 0.29
LSM4-204ENST00000594828 ZBTB8BQ8NAP8 495 aaPredicted RBP16.89■□□□□ 0.29
LSM4-204ENST00000594828 C17orf77Q96MU5 243 aa16.89■□□□□ 0.29
LSM4-204ENST00000594828 SLC35B3Q9H1N7 401 aa16.89■□□□□ 0.29
LSM4-204ENST00000594828 C20orf85Q9H1P6 137 aa16.89■□□□□ 0.29
LSM4-204ENST00000594828 NPVFQ9HCQ7 196 aa16.89■□□□□ 0.29
LSM4-204ENST00000594828 DOK5Q9P104 306 aa16.89■□□□□ 0.29
LSM4-204ENST00000594828 SMIM9A6NGZ8 99 aa16.88■□□□□ 0.29
LSM4-204ENST00000594828 LYRM1O43325 122 aa16.88■□□□□ 0.29
LSM4-204ENST00000594828 TAS2R30P59541 319 aa16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 85.8 ms