RNA–Protein interactions for RNA: ENST00000593168.5

VMP1-217, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 558 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-217ENST00000593168 UQCC3Q6UW78 93 aa10.4□□□□□ -0.74
VMP1-217ENST00000593168 MIR17HGQ75NE6 70 aa10.4□□□□□ -0.74
VMP1-217ENST00000593168 OR1B1Q8NGR6 318 aa10.4□□□□□ -0.74
VMP1-217ENST00000593168 MYOZ3Q8TDC0 251 aa10.4□□□□□ -0.74
VMP1-217ENST00000593168 RNF125Q96EQ8 232 aa10.4□□□□□ -0.74
VMP1-217ENST00000593168 TECRQ9NZ01 308 aaKnown RBP10.4□□□□□ -0.74
VMP1-217ENST00000593168 MRPL27Q9P0M9 148 aaKnown RBP10.4□□□□□ -0.74
VMP1-217ENST00000593168 DOK5Q9P104 306 aa10.4□□□□□ -0.74
VMP1-217ENST00000593168 HMGB3O15347 200 aaKnown RBP10.39□□□□□ -0.75
VMP1-217ENST00000593168 ATP6V1G1O75348 118 aa10.39□□□□□ -0.75
VMP1-217ENST00000593168 EIF3GO75821 320 aaKnown RBP eCLIP10.39□□□□□ -0.75
VMP1-217ENST00000593168 NDUFA7O95182 113 aa10.39□□□□□ -0.75
VMP1-217ENST00000593168 C8orf88P0DMB2 117 aa10.39□□□□□ -0.75
VMP1-217ENST00000593168 FGF8P55075 233 aaPredicted RBP10.39□□□□□ -0.75
VMP1-217ENST00000593168 LYZP61626 148 aa10.39□□□□□ -0.75
VMP1-217ENST00000593168 RELQ04864 619 aaPredicted RBP10.39□□□□□ -0.75
VMP1-217ENST00000593168 C10orf99Q6UWK7 81 aa10.39□□□□□ -0.75
VMP1-217ENST00000593168 LINC00305Q7Z4B0 112 aa10.39□□□□□ -0.75
VMP1-217ENST00000593168 S100A7AQ86SG5 101 aa10.39□□□□□ -0.75
VMP1-217ENST00000593168 KLHDC1Q8N7A1 406 aa10.39□□□□□ -0.75
VMP1-217ENST00000593168 OR4X2Q8NGF9 303 aa10.39□□□□□ -0.75
VMP1-217ENST00000593168 FAM210AQ96ND0 272 aa10.39□□□□□ -0.75
VMP1-217ENST00000593168 PBDC1Q9BVG4 233 aa10.39□□□□□ -0.75
VMP1-217ENST00000593168 SCRT1Q9BWW7 348 aa10.39□□□□□ -0.75
VMP1-217ENST00000593168 HIGD1AQ9Y241 93 aa10.39□□□□□ -0.75
VMP1-217ENST00000593168 IL4P05112 153 aa10.38□□□□□ -0.75
VMP1-217ENST00000593168 S100A7P31151 101 aa10.38□□□□□ -0.75
VMP1-217ENST00000593168 PSMB3P49720 205 aa10.38□□□□□ -0.75
VMP1-217ENST00000593168 PPT1P50897 306 aa10.38□□□□□ -0.75
VMP1-217ENST00000593168 GUK1Q16774 197 aa10.38□□□□□ -0.75
VMP1-217ENST00000593168 PQLC2Q6ZP29 291 aa10.38□□□□□ -0.75
VMP1-217ENST00000593168 LCNL1Q6ZST4 164 aa10.38□□□□□ -0.75
VMP1-217ENST00000593168 WIPF2Q8TF74 440 aaPredicted RBP10.38□□□□□ -0.75
VMP1-217ENST00000593168 ZNF414Q96IQ9 312 aa10.38□□□□□ -0.75
VMP1-217ENST00000593168 FAM167A-AS1Q96KT0 104 aa10.38□□□□□ -0.75
VMP1-217ENST00000593168 UBE2E2Q96LR5 201 aa10.38□□□□□ -0.75
VMP1-217ENST00000593168 CITED4Q96RK1 184 aa10.38□□□□□ -0.75
VMP1-217ENST00000593168 SMDT1Q9H4I9 107 aa10.38□□□□□ -0.75
VMP1-217ENST00000593168 PUS1Q9Y606 427 aaKnown RBP eCLIP10.38□□□□□ -0.75
VMP1-217ENST00000593168 RBFOX3A6NFN3 312 aa10.37□□□□□ -0.75
VMP1-217ENST00000593168 IFNA1P01562 189 aa10.37□□□□□ -0.75
VMP1-217ENST00000593168 IGHV3-11P01762 117 aa10.37□□□□□ -0.75
VMP1-217ENST00000593168 RPLP1P05386 114 aaKnown RBP10.37□□□□□ -0.75
VMP1-217ENST00000593168 CD5P06127 495 aa10.37□□□□□ -0.75
VMP1-217ENST00000593168 ARL14EPLP0DKL9 152 aa10.37□□□□□ -0.75
VMP1-217ENST00000593168 ARL3P36405 182 aa10.37□□□□□ -0.75
VMP1-217ENST00000593168 TAGLN2P37802 199 aaKnown RBP10.37□□□□□ -0.75
VMP1-217ENST00000593168 PEA15Q15121 130 aa10.37□□□□□ -0.75
VMP1-217ENST00000593168 KHDC3LQ587J8 217 aa10.37□□□□□ -0.75
VMP1-217ENST00000593168 TOMM20LQ6UXN7 152 aa10.37□□□□□ -0.75
VMP1-217ENST00000593168 STXBP6Q8NFX7 210 aa10.37□□□□□ -0.75
VMP1-217ENST00000593168 OR5AU1Q8NGC0 362 aa10.37□□□□□ -0.75
VMP1-217ENST00000593168 UHRF2Q96PU4 802 aa10.37□□□□□ -0.75
VMP1-217ENST00000593168 GNB4Q9HAV0 340 aa10.37□□□□□ -0.75
VMP1-217ENST00000593168 PEF1Q9UBV8 284 aaKnown RBP10.37□□□□□ -0.75
VMP1-217ENST00000593168 TRAV5A0A0B4J249 113 aa10.36□□□□□ -0.75
VMP1-217ENST00000593168 PPP5D1E7EU14 171 aa10.36□□□□□ -0.75
VMP1-217ENST00000593168 BMPR1BO00238 502 aa10.36□□□□□ -0.75
VMP1-217ENST00000593168 GCHFRP30047 84 aa10.36□□□□□ -0.75
VMP1-217ENST00000593168 USF2Q15853 346 aaPredicted RBP10.36□□□□□ -0.75
VMP1-217ENST00000593168 TOR2AQ5JU69 321 aa10.36□□□□□ -0.75
VMP1-217ENST00000593168 ZNF506Q5JVG8 444 aa10.36□□□□□ -0.75
VMP1-217ENST00000593168 MORN5Q5VZ52 161 aa10.36□□□□□ -0.75
VMP1-217ENST00000593168 LINC01006Q8NI28 216 aa10.36□□□□□ -0.75
VMP1-217ENST00000593168 WFDC12Q8WWY7 111 aa10.36□□□□□ -0.75
VMP1-217ENST00000593168 ZNF503Q96F45 646 aa10.36□□□□□ -0.75
VMP1-217ENST00000593168 SHANK2-AS3Q9BTD1 123 aa10.36□□□□□ -0.75
VMP1-217ENST00000593168 SLC25A2Q9BXI2 301 aa10.36□□□□□ -0.75
VMP1-217ENST00000593168 SLC25A39Q9BZJ4 359 aaPredicted RBP10.36□□□□□ -0.75
VMP1-217ENST00000593168 TMPRSS5Q9H3S3 457 aa10.36□□□□□ -0.75
VMP1-217ENST00000593168 ZFAND3Q9H8U3 227 aa10.36□□□□□ -0.75
VMP1-217ENST00000593168 MANBALQ9NQG1 85 aa10.36□□□□□ -0.75
VMP1-217ENST00000593168 TMEM167BQ9NRX6 74 aa10.36□□□□□ -0.75
VMP1-217ENST00000593168 GNG13Q9P2W3 67 aa10.36□□□□□ -0.75
VMP1-217ENST00000593168 RNF24Q9Y225 148 aa10.36□□□□□ -0.75
VMP1-217ENST00000593168 NOTCH1P46531 2555 aa10.35□□□□□ -0.75
VMP1-217ENST00000593168 LOC102723971A0A1B0GUV8 181 aa10.35□□□□□ -0.75
VMP1-217ENST00000593168 ANKRD34BA5PLL1 514 aa10.35□□□□□ -0.75
VMP1-217ENST00000593168 H3BRN7 92 aa10.35□□□□□ -0.75
VMP1-217ENST00000593168 NDUFA4O00483 81 aa10.35□□□□□ -0.75
VMP1-217ENST00000593168 GGCTO75223 188 aaKnown RBP10.35□□□□□ -0.75
VMP1-217ENST00000593168 TRBV12-3P01733 135 aa10.35□□□□□ -0.75
VMP1-217ENST00000593168 BCL2P10415 239 aa10.35□□□□□ -0.75
VMP1-217ENST00000593168 S100A1P23297 94 aa10.35□□□□□ -0.75
VMP1-217ENST00000593168 CDX1P47902 265 aaPredicted RBP10.35□□□□□ -0.75
VMP1-217ENST00000593168 SRSF3P84103 164 aaKnown RBP10.35□□□□□ -0.75
VMP1-217ENST00000593168 OR4F5Q8NH21 305 aa10.35□□□□□ -0.75
VMP1-217ENST00000593168 SUN5Q8TC36 379 aa10.35□□□□□ -0.75
VMP1-217ENST00000593168 EIF5A2Q9GZV4 153 aaKnown RBP10.35□□□□□ -0.75
VMP1-217ENST00000593168 RABAC1Q9UI14 185 aa10.35□□□□□ -0.75
VMP1-217ENST00000593168 OR7C2O60412 319 aa10.34□□□□□ -0.75
VMP1-217ENST00000593168 NDUFS6O75380 124 aaKnown RBP10.34□□□□□ -0.75
VMP1-217ENST00000593168 LGALS1P09382 135 aaKnown RBP10.34□□□□□ -0.75
VMP1-217ENST00000593168 HAGHQ16775 308 aa10.34□□□□□ -0.75
VMP1-217ENST00000593168 IQCF2Q8IXL9 164 aa10.34□□□□□ -0.75
VMP1-217ENST00000593168 RARRES2Q99969 163 aa10.34□□□□□ -0.75
VMP1-217ENST00000593168 OR51M1Q9H341 326 aa10.34□□□□□ -0.75
VMP1-217ENST00000593168 TREM1Q9NP99 234 aa10.34□□□□□ -0.75
VMP1-217ENST00000593168 TMEM14CQ9P0S9 112 aa10.34□□□□□ -0.75
VMP1-217ENST00000593168 VAX2Q9UIW0 290 aa10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 123.5 ms