RNA–Protein interactions for RNA: ENST00000593093.5

CIRBP-242, Transcript of cold inducible RNA binding protein, humanhuman

TSL 2

Gene CIRBP, Length 3,528 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-242ENST00000593093 FOXA2Q9Y261 457 aaPredicted RBP11.56□□□□□ -0.56
CIRBP-242ENST00000593093 SPAARA0A1B0GVQ0 90 aa11.56□□□□□ -0.56
CIRBP-242ENST00000593093 G3V4G9 280 aa11.56□□□□□ -0.56
CIRBP-242ENST00000593093 SLC25A17O43808 307 aa11.56□□□□□ -0.56
CIRBP-242ENST00000593093 CCL3L1P16619 93 aa11.56□□□□□ -0.56
CIRBP-242ENST00000593093 PRCDQ00LT1 54 aa11.56□□□□□ -0.56
CIRBP-242ENST00000593093 PRSS57Q6UWY2 283 aa11.56□□□□□ -0.56
CIRBP-242ENST00000593093 OR4A5Q8NH83 315 aa11.56□□□□□ -0.56
CIRBP-242ENST00000593093 MUC6Q6W4X9 2439 aa11.55□□□□□ -0.56
CIRBP-242ENST00000593093 TRGV8A0A0C4DH27 118 aa11.55□□□□□ -0.56
CIRBP-242ENST00000593093 FOXE3Q13461 319 aa11.55□□□□□ -0.56
CIRBP-242ENST00000593093 PERPQ96FX8 193 aa11.55□□□□□ -0.56
CIRBP-242ENST00000593093 RPP21Q9H633 154 aaKnown RBP11.55□□□□□ -0.56
CIRBP-242ENST00000593093 PPIAL4CA0A0B4J2A2 164 aa11.55□□□□□ -0.56
CIRBP-242ENST00000593093 PPIAL4GP0DN37 164 aa11.55□□□□□ -0.56
CIRBP-242ENST00000593093 RNASE2P10153 161 aaKnown RBP11.55□□□□□ -0.56
CIRBP-242ENST00000593093 ST20Q9HBF5 79 aa11.55□□□□□ -0.56
CIRBP-242ENST00000593093 EPDR1Q9UM22 224 aa11.55□□□□□ -0.56
CIRBP-242ENST00000593093 TNRC6AQ8NDV7 1962 aaKnown RBP11.55□□□□□ -0.56
CIRBP-242ENST00000593093 OR1L8Q8NGR8 309 aa11.55□□□□□ -0.56
CIRBP-242ENST00000593093 MEF2CQ06413 473 aaPredicted RBP11.54□□□□□ -0.56
CIRBP-242ENST00000593093 MRPL36Q9P0J6 103 aaKnown RBP11.54□□□□□ -0.56
CIRBP-242ENST00000593093 KBTBD11-OT1A0A1B0GTJ5 212 aa11.54□□□□□ -0.56
CIRBP-242ENST00000593093 DLX1P56177 255 aa11.54□□□□□ -0.56
CIRBP-242ENST00000593093 EXOC3-AS1Q8N2X6 119 aa11.54□□□□□ -0.56
CIRBP-242ENST00000593093 GPR82Q96P67 336 aa11.54□□□□□ -0.56
CIRBP-242ENST00000593093 S4R3C0 116 aa11.54□□□□□ -0.56
CIRBP-242ENST00000593093 C19orf67A6NJJ6 358 aa11.53□□□□□ -0.56
CIRBP-242ENST00000593093 SP9P0CG40 484 aa11.53□□□□□ -0.56
CIRBP-242ENST00000593093 CT45A6P0DMU7 189 aa11.53□□□□□ -0.56
CIRBP-242ENST00000593093 CT45A5P0DMU8 189 aa11.53□□□□□ -0.56
CIRBP-242ENST00000593093 CT45A7P0DMV0 189 aa11.53□□□□□ -0.56
CIRBP-242ENST00000593093 ACP1P24666 158 aa11.53□□□□□ -0.56
CIRBP-242ENST00000593093 PRR7Q8TB68 274 aa11.53□□□□□ -0.56
CIRBP-242ENST00000593093 FAM167A-AS1Q96KT0 104 aa11.53□□□□□ -0.56
CIRBP-242ENST00000593093 AP5S1Q9NUS5 200 aa11.53□□□□□ -0.56
CIRBP-242ENST00000593093 SS18L2Q9UHA2 77 aa11.53□□□□□ -0.56
CIRBP-242ENST00000593093 DLL1O00548 723 aa11.53□□□□□ -0.56
CIRBP-242ENST00000593093 RBP4P02753 201 aa11.53□□□□□ -0.56
CIRBP-242ENST00000593093 LIPFP07098 398 aa11.53□□□□□ -0.56
CIRBP-242ENST00000593093 Q6ZT83 130 aa11.53□□□□□ -0.56
CIRBP-242ENST00000593093 Q71RC1 249 aaPredicted RBP11.53□□□□□ -0.56
CIRBP-242ENST00000593093 DMXL2Q8TDJ6 3036 aa11.53□□□□□ -0.56
CIRBP-242ENST00000593093 DIAPH2-AS1Q14236 149 aa11.53□□□□□ -0.56
CIRBP-242ENST00000593093 C9orf106Q8NAJ2 232 aa11.53□□□□□ -0.56
CIRBP-242ENST00000593093 URB1-AS1Q96HZ7 61 aa11.53□□□□□ -0.56
CIRBP-242ENST00000593093 C18orf15Q96N68 181 aa11.53□□□□□ -0.56
CIRBP-242ENST00000593093 HSPB8Q9UJY1 196 aa11.53□□□□□ -0.56
CIRBP-242ENST00000593093 ZNF257Q9Y2Q1 563 aa11.53□□□□□ -0.56
CIRBP-242ENST00000593093 SRRM5B3KS81 715 aa11.52□□□□□ -0.56
CIRBP-242ENST00000593093 C17orf58Q2M2W7 97 aa11.52□□□□□ -0.56
CIRBP-242ENST00000593093 PATE2Q6UY27 113 aa11.52□□□□□ -0.56
CIRBP-242ENST00000593093 GTSF1Q8WW33 167 aa11.52□□□□□ -0.56
CIRBP-242ENST00000593093 APC2O95996 2303 aa11.52□□□□□ -0.57
CIRBP-242ENST00000593093 C21orf140B9A014 251 aa11.52□□□□□ -0.57
CIRBP-242ENST00000593093 CNIH1O95406 144 aa11.52□□□□□ -0.57
CIRBP-242ENST00000593093 IGLC1P0CG04 106 aa11.52□□□□□ -0.57
CIRBP-242ENST00000593093 GUSBP1Q15486 140 aa11.52□□□□□ -0.57
CIRBP-242ENST00000593093 TMEM178AQ8NBL3 297 aa11.52□□□□□ -0.57
CIRBP-242ENST00000593093 TSSC4Q9Y5U2 329 aaPredicted RBP11.52□□□□□ -0.57
CIRBP-242ENST00000593093 FAM90A9PA6NNJ1 464 aa11.52□□□□□ -0.57
CIRBP-242ENST00000593093 TNFAIP6P98066 277 aaPredicted RBP11.52□□□□□ -0.57
CIRBP-242ENST00000593093 MSMPQ1L6U9 139 aa11.52□□□□□ -0.57
CIRBP-242ENST00000593093 DEFB125Q8N687 156 aa11.52□□□□□ -0.57
CIRBP-242ENST00000593093 IGHV1-18A0A0C4DH31 117 aa11.51□□□□□ -0.57
CIRBP-242ENST00000593093 SUB1P53999 127 aaKnown RBP eCLIP11.51□□□□□ -0.574e-8■□□□□ 10.8
CIRBP-242ENST00000593093 TMEM97Q5BJF2 176 aa11.51□□□□□ -0.57
CIRBP-242ENST00000593093 FAM162BQ5T6X4 162 aa11.51□□□□□ -0.57
CIRBP-242ENST00000593093 SHISA2Q6UWI4 295 aa11.51□□□□□ -0.57
CIRBP-242ENST00000593093 FAM90A1Q86YD7 464 aa11.51□□□□□ -0.57
CIRBP-242ENST00000593093 ADTRPQ96IZ2 230 aa11.51□□□□□ -0.57
CIRBP-242ENST00000593093 FER1L6-AS2Q96M78 137 aa11.51□□□□□ -0.57
CIRBP-242ENST00000593093 SRSF8Q9BRL6 282 aaKnown RBP11.51□□□□□ -0.57
CIRBP-242ENST00000593093 SPTAN1Q13813 2472 aaKnown RBP11.51□□□□□ -0.57
CIRBP-242ENST00000593093 K7EMI3 77 aa11.51□□□□□ -0.57
CIRBP-242ENST00000593093 MZT1Q08AG7 82 aa11.51□□□□□ -0.57
CIRBP-242ENST00000593093 MBD6Q96DN6 1003 aa11.51□□□□□ -0.57
CIRBP-242ENST00000593093 NCR2O95944 276 aa11.51□□□□□ -0.57
CIRBP-242ENST00000593093 APOBEC3AP31941 199 aaPredicted RBP11.51□□□□□ -0.57
CIRBP-242ENST00000593093 PLGLAQ15195 96 aa11.51□□□□□ -0.57
CIRBP-242ENST00000593093 MRPL32Q9BYC8 188 aaKnown RBP11.51□□□□□ -0.57
CIRBP-242ENST00000593093 Q9H3A6 140 aa11.51□□□□□ -0.57
CIRBP-242ENST00000593093 FCER1GP30273 86 aa11.5□□□□□ -0.57
CIRBP-242ENST00000593093 RBPMS2Q6ZRY4 209 aaKnown RBP11.5□□□□□ -0.57
CIRBP-242ENST00000593093 DDB2Q92466 427 aa11.5□□□□□ -0.57
CIRBP-242ENST00000593093 ARMS2P0C7Q2 107 aa11.5□□□□□ -0.57
CIRBP-242ENST00000593093 GCSHP23434 173 aa11.5□□□□□ -0.57
CIRBP-242ENST00000593093 HIST1H1AQ02539 215 aaPredicted RBP11.5□□□□□ -0.57
CIRBP-242ENST00000593093 WT1-ASQ06250 92 aa11.5□□□□□ -0.57
CIRBP-242ENST00000593093 SRSF6Q13247 344 aaKnown RBP11.5□□□□□ -0.57
CIRBP-242ENST00000593093 FAM222BQ8WU58 562 aa11.5□□□□□ -0.57
CIRBP-242ENST00000593093 GEMIN7Q9H840 131 aaKnown RBP11.5□□□□□ -0.57
CIRBP-242ENST00000593093 TPSG1Q9NRR2 321 aa11.5□□□□□ -0.57
CIRBP-242ENST00000593093 PROCRQ9UNN8 238 aa11.5□□□□□ -0.57
CIRBP-242ENST00000593093 ZGRF1Q86YA3 2104 aa11.5□□□□□ -0.57
CIRBP-242ENST00000593093 MALRD1Q5VYJ5 2156 aa11.5□□□□□ -0.57
CIRBP-242ENST00000593093 TEX48A0A1B0GUV7 120 aa11.49□□□□□ -0.57
CIRBP-242ENST00000593093 CSN1S1P47710 185 aa11.49□□□□□ -0.57
CIRBP-242ENST00000593093 OR2K2Q8NGT1 345 aa11.49□□□□□ -0.57
CIRBP-242ENST00000593093 CCL17Q92583 94 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms