RNA–Protein interactions for RNA: ENST00000593061.5

ILF3-223, Transcript of interleukin enhancer binding factor 3, human

TSL 3

Gene ILF3, Length 475 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ILF3-223	ENST00000593061	SYNGR2	O43760	224 aa		14.04	□□□□□ -0.16
ILF3-223	ENST00000593061	C4BPB	P20851	252 aa		14.04	□□□□□ -0.16
ILF3-223	ENST00000593061	NKX2-1	P43699	371 aa	Predicted RBP	14.04	□□□□□ -0.16
ILF3-223	ENST00000593061	NANOS2	P60321	138 aa	Known RBP	14.04	□□□□□ -0.16
ILF3-223	ENST00000593061	C2orf50	Q96LR7	162 aa		14.04	□□□□□ -0.16
ILF3-223	ENST00000593061	NRN1	Q9NPD7	142 aa		14.04	□□□□□ -0.16
ILF3-223	ENST00000593061	FBXL17	Q9UF56	701 aa		14.04	□□□□□ -0.16
ILF3-223	ENST00000593061	WRB	O00258	174 aa		14.03	□□□□□ -0.16
ILF3-223	ENST00000593061	GOSR2	O14653	212 aa		14.03	□□□□□ -0.16
ILF3-223	ENST00000593061	GIG44	P09565	113 aa	Predicted RBP	14.03	□□□□□ -0.16
ILF3-223	ENST00000593061	SPP1	P10451	314 aa		14.03	□□□□□ -0.16
ILF3-223	ENST00000593061	LYZ	P61626	148 aa		14.03	□□□□□ -0.16
ILF3-223	ENST00000593061	SNRPD3	P62318	126 aa	Known RBP	14.03	□□□□□ -0.16
ILF3-223	ENST00000593061	OR2F1	Q13607	317 aa		14.03	□□□□□ -0.16
ILF3-223	ENST00000593061	MORN3	Q6PF18	240 aa	Predicted RBP	14.03	□□□□□ -0.16
ILF3-223	ENST00000593061	C11orf45	Q8TAV5	145 aa		14.03	□□□□□ -0.16
ILF3-223	ENST00000593061	CIB3	Q96Q77	187 aa	Predicted RBP	14.03	□□□□□ -0.16
ILF3-223	ENST00000593061	RAB40C	Q96S21	281 aa		14.02	□□□□□ -0.17
ILF3-223	ENST00000593061	CLEC5A	Q9NY25	188 aa		14.02	□□□□□ -0.17
ILF3-223	ENST00000593061	SCGB1D2	O95969	90 aa		14.01	□□□□□ -0.17
ILF3-223	ENST00000593061	FABP1	P07148	127 aa		14.01	□□□□□ -0.17
ILF3-223	ENST00000593061	NUP62	P37198	522 aa	Predicted RBP	14.01	□□□□□ -0.17
ILF3-223	ENST00000593061	POLR2G	P62487	172 aa	Known RBP eCLIP	14.01	□□□□□ -0.17
ILF3-223	ENST00000593061	TMEM41B	Q5BJD5	291 aa		14.01	□□□□□ -0.17
ILF3-223	ENST00000593061	OR8G2P	Q6IF36	304 aa		14.01	□□□□□ -0.17
ILF3-223	ENST00000593061	MFF	Q9GZY8	342 aa		14.01	□□□□□ -0.17
ILF3-223	ENST00000593061	PFDN2	Q9UHV9	154 aa		14.01	□□□□□ -0.17
ILF3-223	ENST00000593061		H3BP45	60 aa		14	□□□□□ -0.17
ILF3-223	ENST00000593061	MBP	P02686	304 aa	Predicted RBP	14	□□□□□ -0.17
ILF3-223	ENST00000593061	RPP30	P78346	268 aa	Known RBP	14	□□□□□ -0.17
ILF3-223	ENST00000593061	SPANXN5	Q5MJ07	72 aa		14	□□□□□ -0.17
ILF3-223	ENST00000593061		Q8NAQ8	132 aa		14	□□□□□ -0.17
ILF3-223	ENST00000593061	PPP1R14B	Q96C90	147 aa		14	□□□□□ -0.17
ILF3-223	ENST00000593061	BIRC6	Q9NR09	4857 aa		14	□□□□□ -0.17
ILF3-223	ENST00000593061	IGKV1OR2-108	A0A075B7D4	117 aa		13.99	□□□□□ -0.17
ILF3-223	ENST00000593061	IGHV4-28	A0A0C4DH34	117 aa		13.99	□□□□□ -0.17
ILF3-223	ENST00000593061	SSSCA1	O60232	199 aa		13.99	□□□□□ -0.17
ILF3-223	ENST00000593061	SIX6	O95475	246 aa		13.99	□□□□□ -0.17
ILF3-223	ENST00000593061	CYCS	P99999	105 aa	Known RBP	13.99	□□□□□ -0.17
ILF3-223	ENST00000593061	IL15RA	Q13261	267 aa		13.99	□□□□□ -0.17
ILF3-223	ENST00000593061	TRGV9	Q99603	122 aa		13.99	□□□□□ -0.17
ILF3-223	ENST00000593061	MED28	Q9H204	178 aa		13.99	□□□□□ -0.17
ILF3-223	ENST00000593061	MGAT4C	Q9UBM8	478 aa		13.99	□□□□□ -0.17
ILF3-223	ENST00000593061	KMT2A	Q03164	3969 aa		13.98	□□□□□ -0.17
ILF3-223	ENST00000593061	THAP8	Q8NA92	274 aa		13.98	□□□□□ -0.17
ILF3-223	ENST00000593061	SMIM8	Q96KF7	97 aa		13.98	□□□□□ -0.17
ILF3-223	ENST00000593061	NMES1	Q9C002	83 aa		13.98	□□□□□ -0.17
ILF3-223	ENST00000593061	SEPSECS	Q9HD40	501 aa	Known RBP	13.98	□□□□□ -0.17
ILF3-223	ENST00000593061	RCL1	Q9Y2P8	373 aa	Known RBP	13.98	□□□□□ -0.17
ILF3-223	ENST00000593061		K7EPK0	472 aa		13.97	□□□□□ -0.17
ILF3-223	ENST00000593061	RBMY1A1	P0DJD3	496 aa	Known RBP	13.97	□□□□□ -0.17
ILF3-223	ENST00000593061	RBMY1C	P0DJD4	496 aa		13.97	□□□□□ -0.17
ILF3-223	ENST00000593061	H2BFS	P57053	126 aa		13.97	□□□□□ -0.17
ILF3-223	ENST00000593061	DEFB1	P60022	68 aa		13.97	□□□□□ -0.17
ILF3-223	ENST00000593061	RBMY1F	Q15415	496 aa	Known RBP	13.97	□□□□□ -0.17
ILF3-223	ENST00000593061	LINC00052	Q96N35	136 aa		13.97	□□□□□ -0.17
ILF3-223	ENST00000593061	STRAP	Q9Y3F4	350 aa	Known RBP	13.97	□□□□□ -0.17
ILF3-223	ENST00000593061	LSM5	Q9Y4Y9	91 aa	Known RBP	13.97	□□□□□ -0.17
ILF3-223	ENST00000593061		X6R8D5	127 aa		13.97	□□□□□ -0.17
ILF3-223	ENST00000593061	VPS13D	Q5THJ4	4388 aa		13.97	□□□□□ -0.17
ILF3-223	ENST00000593061	ZNF705E	A8MWA4	302 aa	Predicted RBP	13.96	□□□□□ -0.17
ILF3-223	ENST00000593061	PRSS46	E5RG02	174 aa		13.96	□□□□□ -0.17
ILF3-223	ENST00000593061		H3BMM0	161 aa		13.96	□□□□□ -0.17
ILF3-223	ENST00000593061	MIF	P14174	115 aa		13.96	□□□□□ -0.17
ILF3-223	ENST00000593061	TAS2R30	P59541	319 aa		13.96	□□□□□ -0.17
ILF3-223	ENST00000593061	S100A10	P60903	97 aa		13.96	□□□□□ -0.17
ILF3-223	ENST00000593061	AKR1C1	Q04828	323 aa		13.96	□□□□□ -0.17
ILF3-223	ENST00000593061	CSNK1G2-AS1	Q8NCQ2	148 aa		13.96	□□□□□ -0.17
ILF3-223	ENST00000593061	PSENEN	Q9NZ42	101 aa		13.96	□□□□□ -0.17
ILF3-223	ENST00000593061	XCL2	Q9UBD3	114 aa		13.96	□□□□□ -0.17
ILF3-223	ENST00000593061		L7N2F9	121 aa		13.95	□□□□□ -0.18
ILF3-223	ENST00000593061	IGKV3-20	P01619	116 aa		13.95	□□□□□ -0.18
ILF3-223	ENST00000593061	ID1	P41134	155 aa		13.95	□□□□□ -0.18
ILF3-223	ENST00000593061	PAX9	P55771	341 aa		13.95	□□□□□ -0.18
ILF3-223	ENST00000593061	NUTF2	P61970	127 aa	Known RBP	13.95	□□□□□ -0.18
ILF3-223	ENST00000593061	VAMP2	P63027	116 aa		13.95	□□□□□ -0.18
ILF3-223	ENST00000593061	RAB32	Q13637	225 aa		13.95	□□□□□ -0.18
ILF3-223	ENST00000593061	FCN2	Q15485	313 aa		13.95	□□□□□ -0.18
ILF3-223	ENST00000593061	C1orf194	Q5T5A4	169 aa		13.95	□□□□□ -0.18
ILF3-223	ENST00000593061	ACOT7L	Q6ZUV0	252 aa		13.95	□□□□□ -0.18
ILF3-223	ENST00000593061	OR8I2	Q8N0Y5	310 aa		13.95	□□□□□ -0.18
ILF3-223	ENST00000593061	SMCO3	A2RU48	225 aa		13.94	□□□□□ -0.18
ILF3-223	ENST00000593061	TSC22D2	O75157	780 aa		13.94	□□□□□ -0.18
ILF3-223	ENST00000593061	HLA-DRB4	P13762	266 aa		13.94	□□□□□ -0.18
ILF3-223	ENST00000593061	CXCL3	P19876	107 aa		13.94	□□□□□ -0.18
ILF3-223	ENST00000593061	PVALB	P20472	110 aa	Predicted RBP	13.94	□□□□□ -0.18
ILF3-223	ENST00000593061	GATA2	P23769	480 aa	Predicted RBP	13.94	□□□□□ -0.18
ILF3-223	ENST00000593061	RRAS2	P62070	204 aa	Predicted RBP	13.94	□□□□□ -0.18
ILF3-223	ENST00000593061	GDF5OS	Q5U4N7	250 aa		13.94	□□□□□ -0.18
ILF3-223	ENST00000593061	C1QTNF4	Q9BXJ3	329 aa		13.94	□□□□□ -0.18
ILF3-223	ENST00000593061	SLC25A22	Q9H936	323 aa		13.94	□□□□□ -0.18
ILF3-223	ENST00000593061	HLA-DRB4	X5D2U9	266 aa		13.94	□□□□□ -0.18
ILF3-223	ENST00000593061	CFD	P00746	253 aa	Predicted RBP	13.93	□□□□□ -0.18
ILF3-223	ENST00000593061	ORM2	P19652	201 aa		13.93	□□□□□ -0.18
ILF3-223	ENST00000593061	PSMB3	P49720	205 aa		13.93	□□□□□ -0.18
ILF3-223	ENST00000593061	BPIFC	Q8NFQ6	507 aa		13.93	□□□□□ -0.18
ILF3-223	ENST00000593061	OR11H7	Q8NGC8	314 aa		13.93	□□□□□ -0.18
ILF3-223	ENST00000593061	C2CD4C	Q8TF44	421 aa		13.93	□□□□□ -0.18
ILF3-223	ENST00000593061	ELOA3C	A0A087WX78	387 aa	Predicted RBP	13.92	□□□□□ -0.18
ILF3-223	ENST00000593061	RLN2	P04090	185 aa		13.92	□□□□□ -0.18

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