RNA–Protein interactions for RNA: ENST00000591545.5

SMARCA4-216, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 2

Gene SMARCA4, Length 5,193 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-216ENST00000591545 TFF1P04155 84 aa10.95□□□□□ -0.66
SMARCA4-216ENST00000591545 FAM71F2Q6NXP2 309 aa10.95□□□□□ -0.66
SMARCA4-216ENST00000591545 CFAP161Q6P656 301 aa10.95□□□□□ -0.66
SMARCA4-216ENST00000591545 SSBP4Q9BWG4 385 aaPredicted RBP10.95□□□□□ -0.66
SMARCA4-216ENST00000591545 IGHV3OR16-8A0A075B7F1 116 aa10.95□□□□□ -0.66
SMARCA4-216ENST00000591545 OVOL1O14753 267 aa10.95□□□□□ -0.66
SMARCA4-216ENST00000591545 ERVK11-1P61568 191 aa10.95□□□□□ -0.66
SMARCA4-216ENST00000591545 SRSF4Q08170 494 aaKnown RBP10.95□□□□□ -0.66
SMARCA4-216ENST00000591545 RNF182Q8N6D2 247 aa10.95□□□□□ -0.66
SMARCA4-216ENST00000591545 IFI27L1Q96BM0 104 aa10.95□□□□□ -0.66
SMARCA4-216ENST00000591545 ANAPC1Q9H1A4 1944 aa10.95□□□□□ -0.66
SMARCA4-216ENST00000591545 TRGV2A0A075B6R0 118 aa10.95□□□□□ -0.66
SMARCA4-216ENST00000591545 E7EQL1 145 aa10.95□□□□□ -0.66
SMARCA4-216ENST00000591545 CD55P08174 381 aa10.95□□□□□ -0.66
SMARCA4-216ENST00000591545 PLNP26678 52 aa10.95□□□□□ -0.66
SMARCA4-216ENST00000591545 TMEM200BQ69YZ2 307 aa10.95□□□□□ -0.66
SMARCA4-216ENST00000591545 TREML4Q6UXN2 200 aa10.95□□□□□ -0.66
SMARCA4-216ENST00000591545 TPTE2P1Q5T6R2 138 aa10.94□□□□□ -0.66
SMARCA4-216ENST00000591545 BRD3OSQ6XYD6 125 aa10.94□□□□□ -0.66
SMARCA4-216ENST00000591545 GGTLC1Q9BX51 225 aa10.94□□□□□ -0.66
SMARCA4-216ENST00000591545 TRGV11A0A075B6L2 103 aa10.94□□□□□ -0.66
SMARCA4-216ENST00000591545 HOXA3O43365 443 aaPredicted RBP10.94□□□□□ -0.66
SMARCA4-216ENST00000591545 AMBPP02760 352 aa10.94□□□□□ -0.66
SMARCA4-216ENST00000591545 RNF5Q99942 180 aa10.94□□□□□ -0.66
SMARCA4-216ENST00000591545 IGKV1D-8A0A087WSZ0 117 aa10.94□□□□□ -0.66
SMARCA4-216ENST00000591545 TRAV8-2A0A0B4J237 113 aa10.94□□□□□ -0.66
SMARCA4-216ENST00000591545 MUC21A0A0G2JKD1 596 aa10.94□□□□□ -0.66
SMARCA4-216ENST00000591545 MUC21A0A140T8X8 626 aa10.94□□□□□ -0.66
SMARCA4-216ENST00000591545 PYYP10082 97 aa10.94□□□□□ -0.66
SMARCA4-216ENST00000591545 MUC21Q5SSG8 566 aa10.94□□□□□ -0.66
SMARCA4-216ENST00000591545 OR2K2Q8NGT1 345 aa10.94□□□□□ -0.66
SMARCA4-216ENST00000591545 REG4Q9BYZ8 158 aa10.94□□□□□ -0.66
SMARCA4-216ENST00000591545 TRBV6-6A0A0A6YYG2 114 aa10.94□□□□□ -0.66
SMARCA4-216ENST00000591545 LILRA1O75019 489 aa10.94□□□□□ -0.66
SMARCA4-216ENST00000591545 SAP30O75446 220 aa10.94□□□□□ -0.66
SMARCA4-216ENST00000591545 CHTOPQ9Y3Y2 248 aaKnown RBP10.93□□□□□ -0.66
SMARCA4-216ENST00000591545 MED12Q93074 2177 aa10.93□□□□□ -0.66
SMARCA4-216ENST00000591545 MSMBP08118 114 aa10.93□□□□□ -0.66
SMARCA4-216ENST00000591545 C1orf194Q5T5A4 169 aa10.93□□□□□ -0.66
SMARCA4-216ENST00000591545 SUPT4H1P63272 117 aaKnown RBP10.93□□□□□ -0.66
SMARCA4-216ENST00000591545 DEFB121Q5J5C9 76 aa10.93□□□□□ -0.66
SMARCA4-216ENST00000591545 TMEM219Q86XT9 240 aa10.93□□□□□ -0.66
SMARCA4-216ENST00000591545 COL8A2P25067 703 aa10.93□□□□□ -0.66
SMARCA4-216ENST00000591545 KLRD1Q13241 179 aa10.93□□□□□ -0.66
SMARCA4-216ENST00000591545 NMSQ5H8A3 153 aa10.93□□□□□ -0.66
SMARCA4-216ENST00000591545 Q96MF0 132 aa10.93□□□□□ -0.66
SMARCA4-216ENST00000591545 SELLP14151 372 aa10.92□□□□□ -0.66
SMARCA4-216ENST00000591545 TMEM14EPQ6UXP3 125 aa10.92□□□□□ -0.66
SMARCA4-216ENST00000591545 LINC00527Q9UJ94 153 aa10.92□□□□□ -0.66
SMARCA4-216ENST00000591545 CEACAM8P31997 349 aaPredicted RBP10.92□□□□□ -0.66
SMARCA4-216ENST00000591545 PAX8Q06710 450 aa10.92□□□□□ -0.66
SMARCA4-216ENST00000591545 KIR3DL3Q8N743 410 aa10.92□□□□□ -0.66
SMARCA4-216ENST00000591545 IGKV1-12A0A0C4DH73 117 aa10.92□□□□□ -0.66
SMARCA4-216ENST00000591545 IGKV1D-12P01611 117 aa10.92□□□□□ -0.66
SMARCA4-216ENST00000591545 CXCL1P09341 107 aa10.92□□□□□ -0.66
SMARCA4-216ENST00000591545 CD7P09564 240 aa10.92□□□□□ -0.66
SMARCA4-216ENST00000591545 CD33P20138 364 aa10.92□□□□□ -0.66
SMARCA4-216ENST00000591545 TICRRQ7Z2Z1 1910 aa10.92□□□□□ -0.66
SMARCA4-216ENST00000591545 A8MWV9 139 aa10.92□□□□□ -0.66
SMARCA4-216ENST00000591545 ZNF479Q96JC4 524 aa10.92□□□□□ -0.66
SMARCA4-216ENST00000591545 TANC1Q9C0D5 1861 aa10.92□□□□□ -0.66
SMARCA4-216ENST00000591545 USF3Q68DE3 2245 aa10.91□□□□□ -0.66
SMARCA4-216ENST00000591545 A0A087WV48 116 aa10.91□□□□□ -0.66
SMARCA4-216ENST00000591545 LINC01551Q86U37 167 aa10.91□□□□□ -0.66
SMARCA4-216ENST00000591545 SIGMAR1Q99720 223 aa10.91□□□□□ -0.66
SMARCA4-216ENST00000591545 VSIRQ9H7M9 311 aa10.91□□□□□ -0.66
SMARCA4-216ENST00000591545 SLC25A20O43772 301 aa10.91□□□□□ -0.66
SMARCA4-216ENST00000591545 MEGF9Q9H1U4 602 aa10.91□□□□□ -0.66
SMARCA4-216ENST00000591545 FNDC4Q9H6D8 234 aaPredicted RBP10.91□□□□□ -0.66
SMARCA4-216ENST00000591545 TOMM7Q9P0U1 55 aa10.91□□□□□ -0.66
SMARCA4-216ENST00000591545 PAX2Q02962 417 aa10.91□□□□□ -0.66
SMARCA4-216ENST00000591545 ACTL10Q5JWF8 245 aa10.91□□□□□ -0.66
SMARCA4-216ENST00000591545 Q6ZS49 121 aa10.91□□□□□ -0.66
SMARCA4-216ENST00000591545 ZFHX2Q9C0A1 2572 aaPredicted RBP10.91□□□□□ -0.66
SMARCA4-216ENST00000591545 KIF26BQ2KJY2 2108 aa10.91□□□□□ -0.66
SMARCA4-216ENST00000591545 IGHV1-3A0A0C4DH29 117 aa10.91□□□□□ -0.66
SMARCA4-216ENST00000591545 ZNF815PA8K554 130 aa10.91□□□□□ -0.66
SMARCA4-216ENST00000591545 LYL1P12980 280 aa10.91□□□□□ -0.66
SMARCA4-216ENST00000591545 TMEM42Q69YG0 159 aa10.91□□□□□ -0.66
SMARCA4-216ENST00000591545 TRGV9Q99603 122 aa10.9□□□□□ -0.66
SMARCA4-216ENST00000591545 PKDREJQ9NTG1 2253 aa10.9□□□□□ -0.66
SMARCA4-216ENST00000591545 LY6HO94772 140 aa10.9□□□□□ -0.66
SMARCA4-216ENST00000591545 TDGF1P13385 188 aa10.9□□□□□ -0.66
SMARCA4-216ENST00000591545 SLX1AQ9BQ83 275 aa10.9□□□□□ -0.66
SMARCA4-216ENST00000591545 MRPL27Q9P0M9 148 aaKnown RBP10.9□□□□□ -0.66
SMARCA4-216ENST00000591545 C3orf36Q3SXR2 165 aa10.9□□□□□ -0.66
SMARCA4-216ENST00000591545 SEPSECSQ9HD40 501 aaKnown RBP10.9□□□□□ -0.66
SMARCA4-216ENST00000591545 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.89□□□□□ -0.67
SMARCA4-216ENST00000591545 CD177Q8N6Q3 437 aa10.89□□□□□ -0.67
SMARCA4-216ENST00000591545 VOPP1Q96AW1 172 aa10.89□□□□□ -0.67
SMARCA4-216ENST00000591545 BDP1A6H8Y1 2624 aa10.89□□□□□ -0.67
SMARCA4-216ENST00000591545 FNDC10F2Z333 226 aa10.89□□□□□ -0.67
SMARCA4-216ENST00000591545 LAGE3Q14657 143 aa10.89□□□□□ -0.67
SMARCA4-216ENST00000591545 SAMD5Q5TGI4 173 aa10.89□□□□□ -0.67
SMARCA4-216ENST00000591545 GAFA1Q96PS6 74 aa10.89□□□□□ -0.67
SMARCA4-216ENST00000591545 PGPEP1Q9NXJ5 209 aa10.89□□□□□ -0.67
SMARCA4-216ENST00000591545 HEATR1Q9H583 2144 aaKnown RBP10.89□□□□□ -0.67
SMARCA4-216ENST00000591545 TMEM238C9JI98 176 aa10.89□□□□□ -0.67
SMARCA4-216ENST00000591545 GZMBP10144 247 aa10.89□□□□□ -0.67
SMARCA4-216ENST00000591545 PRTN3P24158 256 aa10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms