RNA–Protein interactions for RNA: ENST00000588516.5

NEDD4L-223, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, humanhuman

TSL 5

Gene NEDD4L, Length 1,304 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4L-223ENST00000588516 SIGLEC9Q9Y336 463 aa11.27□□□□□ -0.61
NEDD4L-223ENST00000588516 F11RQ9Y624 299 aaKnown RBP11.27□□□□□ -0.61
NEDD4L-223ENST00000588516 NIPBLQ6KC79 2804 aaeCLIP11.27□□□□□ -0.61
NEDD4L-223ENST00000588516 IGHV2-26A0A0B4J1V2 119 aa11.26□□□□□ -0.61
NEDD4L-223ENST00000588516 TRAV5A0A0B4J249 113 aa11.26□□□□□ -0.61
NEDD4L-223ENST00000588516 TRBV6-1A0A0K0K1D8 114 aa11.26□□□□□ -0.61
NEDD4L-223ENST00000588516 CGB1A6NKQ9 187 aa11.26□□□□□ -0.61
NEDD4L-223ENST00000588516 BUB1B-PAK6H3BSN5 160 aa11.26□□□□□ -0.61
NEDD4L-223ENST00000588516 SCGB2A1O75556 95 aa11.26□□□□□ -0.61
NEDD4L-223ENST00000588516 TOMM40O96008 361 aa11.26□□□□□ -0.61
NEDD4L-223ENST00000588516 IGLV1-47P01700 117 aa11.26□□□□□ -0.61
NEDD4L-223ENST00000588516 NBEAP1P0C6P0 100 aa11.26□□□□□ -0.61
NEDD4L-223ENST00000588516 MYCNOSP40205 109 aa11.26□□□□□ -0.61
NEDD4L-223ENST00000588516 FBXL19-AS1Q494R0 122 aa11.26□□□□□ -0.61
NEDD4L-223ENST00000588516 PPP1R27Q86WC6 154 aa11.26□□□□□ -0.61
NEDD4L-223ENST00000588516 OR1B1Q8NGR6 318 aa11.26□□□□□ -0.61
NEDD4L-223ENST00000588516 RPEQ96AT9 228 aa11.26□□□□□ -0.61
NEDD4L-223ENST00000588516 BORCS7Q96B45 105 aa11.26□□□□□ -0.61
NEDD4L-223ENST00000588516 DAZAP1Q96EP5 407 aaKnown RBP11.26□□□□□ -0.61
NEDD4L-223ENST00000588516 TMEM68Q96MH6 324 aa11.26□□□□□ -0.61
NEDD4L-223ENST00000588516 MIEN1Q9BRT3 115 aa11.26□□□□□ -0.61
NEDD4L-223ENST00000588516 GFRA4Q9GZZ7 299 aa11.26□□□□□ -0.61
NEDD4L-223ENST00000588516 GNB4Q9HAV0 340 aa11.26□□□□□ -0.61
NEDD4L-223ENST00000588516 ZNRD1Q9P1U0 126 aa11.26□□□□□ -0.61
NEDD4L-223ENST00000588516 HIGD1AQ9Y241 93 aa11.26□□□□□ -0.61
NEDD4L-223ENST00000588516 POLR3KQ9Y2Y1 108 aaPredicted RBP11.26□□□□□ -0.61
NEDD4L-223ENST00000588516 IGHV1-3A0A0C4DH29 117 aa11.25□□□□□ -0.61
NEDD4L-223ENST00000588516 ORM2P19652 201 aa11.25□□□□□ -0.61
NEDD4L-223ENST00000588516 KLF5Q13887 457 aaPredicted RBP11.25□□□□□ -0.61
NEDD4L-223ENST00000588516 FXYD3Q14802 87 aa11.25□□□□□ -0.61
NEDD4L-223ENST00000588516 OR8B3Q8NGG8 313 aa11.25□□□□□ -0.61
NEDD4L-223ENST00000588516 TIMD4Q96H15 378 aa11.25□□□□□ -0.61
NEDD4L-223ENST00000588516 OR8B2Q96RD0 313 aa11.25□□□□□ -0.61
NEDD4L-223ENST00000588516 OTORQ9NRC9 128 aa11.25□□□□□ -0.61
NEDD4L-223ENST00000588516 TACC2O95359 2948 aa11.24□□□□□ -0.61
NEDD4L-223ENST00000588516 TRAV30A0A087WSZ9 112 aa11.24□□□□□ -0.61
NEDD4L-223ENST00000588516 PGPA6NDG6 321 aa11.24□□□□□ -0.61
NEDD4L-223ENST00000588516 C22orf46C9J442 243 aa11.24□□□□□ -0.61
NEDD4L-223ENST00000588516 K7EQM0 130 aa11.24□□□□□ -0.61
NEDD4L-223ENST00000588516 CCL21O00585 134 aa11.24□□□□□ -0.61
NEDD4L-223ENST00000588516 LIPFP07098 398 aa11.24□□□□□ -0.61
NEDD4L-223ENST00000588516 PYYP10082 97 aa11.24□□□□□ -0.61
NEDD4L-223ENST00000588516 Q6ZWC4 215 aa11.24□□□□□ -0.61
NEDD4L-223ENST00000588516 LYPD1Q8N2G4 141 aa11.24□□□□□ -0.61
NEDD4L-223ENST00000588516 KLHDC1Q8N7A1 406 aa11.24□□□□□ -0.61
NEDD4L-223ENST00000588516 NUDT10Q8NFP7 164 aa11.24□□□□□ -0.61
NEDD4L-223ENST00000588516 NUDT11Q96G61 164 aa11.24□□□□□ -0.61
NEDD4L-223ENST00000588516 TMUB1Q9BVT8 246 aa11.24□□□□□ -0.61
NEDD4L-223ENST00000588516 RAB1BQ9H0U4 201 aa11.24□□□□□ -0.61
NEDD4L-223ENST00000588516 TP53TG3Q9ULZ0 132 aa11.24□□□□□ -0.61
NEDD4L-223ENST00000588516 PPIAL4CA0A0B4J2A2 164 aa11.23□□□□□ -0.61
NEDD4L-223ENST00000588516 C20orf202A1L168 122 aa11.23□□□□□ -0.61
NEDD4L-223ENST00000588516 E7EUB6 86 aa11.23□□□□□ -0.61
NEDD4L-223ENST00000588516 NUPR1O60356 82 aa11.23□□□□□ -0.61
NEDD4L-223ENST00000588516 ZNF324O75467 553 aaPredicted RBP11.23□□□□□ -0.61
NEDD4L-223ENST00000588516 OR2J3O76001 311 aa11.23□□□□□ -0.61
NEDD4L-223ENST00000588516 PPIAL4GP0DN37 164 aa11.23□□□□□ -0.61
NEDD4L-223ENST00000588516 SRIP30626 198 aa11.23□□□□□ -0.61
NEDD4L-223ENST00000588516 AMTP48728 403 aa11.23□□□□□ -0.61
NEDD4L-223ENST00000588516 MFAP2P55001 183 aa11.23□□□□□ -0.61
NEDD4L-223ENST00000588516 PMCHL1Q16048 86 aa11.23□□□□□ -0.61
NEDD4L-223ENST00000588516 MRPL54Q6P161 138 aaKnown RBP11.23□□□□□ -0.61
NEDD4L-223ENST00000588516 DMRTC2Q8IXT2 367 aaPredicted RBP11.23□□□□□ -0.61
NEDD4L-223ENST00000588516 RPP21Q9H633 154 aaKnown RBP11.23□□□□□ -0.61
NEDD4L-223ENST00000588516 SH3BGRL2Q9UJC5 107 aa11.23□□□□□ -0.61
NEDD4L-223ENST00000588516 PLCE1Q9P212 2302 aa11.23□□□□□ -0.61
NEDD4L-223ENST00000588516 DCHS2Q6V1P9 2916 aa11.22□□□□□ -0.61
NEDD4L-223ENST00000588516 DIRC3C9JPN6 131 aa11.22□□□□□ -0.61
NEDD4L-223ENST00000588516 BMPR1BO00238 502 aa11.22□□□□□ -0.61
NEDD4L-223ENST00000588516 FCN3O75636 299 aa11.22□□□□□ -0.61
NEDD4L-223ENST00000588516 P01737 135 aa11.22□□□□□ -0.61
NEDD4L-223ENST00000588516 TCL1AP56279 114 aa11.22□□□□□ -0.61
NEDD4L-223ENST00000588516 PLGLAQ15195 96 aa11.22□□□□□ -0.61
NEDD4L-223ENST00000588516 C10orf55Q5SWW7 151 aa11.22□□□□□ -0.61
NEDD4L-223ENST00000588516 TPTE2P1Q5T6R2 138 aa11.22□□□□□ -0.61
NEDD4L-223ENST00000588516 MUC15Q8N387 334 aa11.22□□□□□ -0.61
NEDD4L-223ENST00000588516 C11orf42Q8N5U0 333 aa11.22□□□□□ -0.61
NEDD4L-223ENST00000588516 RASL11BQ9BPW5 248 aa11.22□□□□□ -0.61
NEDD4L-223ENST00000588516 NRN1Q9NPD7 142 aa11.22□□□□□ -0.61
NEDD4L-223ENST00000588516 TNCP24821 2201 aa11.22□□□□□ -0.61
NEDD4L-223ENST00000588516 A0A1B0GV90 55 aa11.21□□□□□ -0.61
NEDD4L-223ENST00000588516 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP11.21□□□□□ -0.61
NEDD4L-223ENST00000588516 A0A1B0GW15 77 aa11.21□□□□□ -0.61
NEDD4L-223ENST00000588516 A0A1W2PS18 150 aa11.21□□□□□ -0.61
NEDD4L-223ENST00000588516 C19orf84I3L1E1 186 aa11.21□□□□□ -0.61
NEDD4L-223ENST00000588516 PMCHP20382 165 aa11.21□□□□□ -0.61
NEDD4L-223ENST00000588516 DIAPH2-AS1Q14236 149 aa11.21□□□□□ -0.61
NEDD4L-223ENST00000588516 MMDQ15546 238 aa11.21□□□□□ -0.61
NEDD4L-223ENST00000588516 HCP5Q6MZN7 132 aa11.21□□□□□ -0.61
NEDD4L-223ENST00000588516 NUP35Q8NFH5 326 aa11.21□□□□□ -0.61
NEDD4L-223ENST00000588516 TBL2Q9Y4P3 447 aaKnown RBP11.21□□□□□ -0.61
NEDD4L-223ENST00000588516 SERTM2A0A1B0GWG4 89 aa11.2□□□□□ -0.62
NEDD4L-223ENST00000588516 FBLL1A6NHQ2 334 aaKnown RBP11.2□□□□□ -0.62
NEDD4L-223ENST00000588516 OOSP1A8MZH6 123 aa11.2□□□□□ -0.62
NEDD4L-223ENST00000588516 M0R1W7 72 aa11.2□□□□□ -0.62
NEDD4L-223ENST00000588516 CNIH1O95406 144 aa11.2□□□□□ -0.62
NEDD4L-223ENST00000588516 LTAP01374 205 aa11.2□□□□□ -0.62
NEDD4L-223ENST00000588516 TCRAP04437 139 aa11.2□□□□□ -0.62
NEDD4L-223ENST00000588516 GP9P14770 177 aa11.2□□□□□ -0.62
NEDD4L-223ENST00000588516 HTR1DP28221 377 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms