RNA–Protein interactions for RNA: ENST00000588009.1

TUBD1-208, Transcript of tubulin delta 1, human

TSL 3

Gene TUBD1, Length 812 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TUBD1-208	ENST00000588009	CDK10	Q15131	360 aa		2.69	□□□□□ -1.98
TUBD1-208	ENST00000588009	LPCAT3	Q6P1A2	487 aa		2.69	□□□□□ -1.98
TUBD1-208	ENST00000588009	SLC35F6	Q8N357	371 aa		2.69	□□□□□ -1.98
TUBD1-208	ENST00000588009	SMCR5	Q8TEV8	140 aa		2.69	□□□□□ -1.98
TUBD1-208	ENST00000588009	FGF13	Q92913	245 aa		2.69	□□□□□ -1.98
TUBD1-208	ENST00000588009	NIPSNAP1	Q9BPW8	284 aa		2.69	□□□□□ -1.98
TUBD1-208	ENST00000588009	TTTY13	Q9BZ97	58 aa		2.69	□□□□□ -1.98
TUBD1-208	ENST00000588009	ARMC1	Q9NVT9	282 aa		2.69	□□□□□ -1.98
TUBD1-208	ENST00000588009	TACC2	O95359	2948 aa		2.68	□□□□□ -1.98
TUBD1-208	ENST00000588009	FAM236D	A0A1B0GTK5	79 aa		2.68	□□□□□ -1.98
TUBD1-208	ENST00000588009	TMEM235	A6NFC5	223 aa		2.68	□□□□□ -1.98
TUBD1-208	ENST00000588009	OR4C46	A6NHA9	309 aa		2.68	□□□□□ -1.98
TUBD1-208	ENST00000588009	FAM159B	A6NKW6	160 aa		2.68	□□□□□ -1.98
TUBD1-208	ENST00000588009	ODF3B	A8MYP8	253 aa		2.68	□□□□□ -1.98
TUBD1-208	ENST00000588009	ZNF73	O43830	326 aa	Predicted RBP	2.68	□□□□□ -1.98
TUBD1-208	ENST00000588009	OR2B3	O76000	313 aa		2.68	□□□□□ -1.98
TUBD1-208	ENST00000588009	FAM236C	P0DP71	79 aa		2.68	□□□□□ -1.98
TUBD1-208	ENST00000588009	KCNE1	P15382	129 aa		2.68	□□□□□ -1.98
TUBD1-208	ENST00000588009	RAB14	P61106	215 aa		2.68	□□□□□ -1.98
TUBD1-208	ENST00000588009	RPL19	P84098	196 aa	Known RBP	2.68	□□□□□ -1.98
TUBD1-208	ENST00000588009	LIN52	Q52LA3	116 aa		2.68	□□□□□ -1.98
TUBD1-208	ENST00000588009	BRD3OS	Q6XYD6	125 aa		2.68	□□□□□ -1.98
TUBD1-208	ENST00000588009	SLC36A1	Q7Z2H8	476 aa		2.68	□□□□□ -1.98
TUBD1-208	ENST00000588009	AKAP14	Q86UN6	197 aa		2.68	□□□□□ -1.98
TUBD1-208	ENST00000588009	C20orf196	Q8IYI0	205 aa		2.68	□□□□□ -1.98
TUBD1-208	ENST00000588009	C20orf166-AS1	Q96NR2	134 aa		2.68	□□□□□ -1.98
TUBD1-208	ENST00000588009	PHB2	Q99623	299 aa		2.68	□□□□□ -1.98
TUBD1-208	ENST00000588009	TUBA4B	Q9H853	241 aa		2.68	□□□□□ -1.98
TUBD1-208	ENST00000588009	AKAP9	Q99996	3911 aa		2.68	□□□□□ -1.98
TUBD1-208	ENST00000588009	IBTK	Q9P2D0	1353 aa	Predicted RBP	2.68	□□□□□ -1.98
TUBD1-208	ENST00000588009	DOCK5	Q9H7D0	1870 aa		2.68	□□□□□ -1.98
TUBD1-208	ENST00000588009	ARHGAP32	A7KAX9	2087 aa		2.68	□□□□□ -1.98
TUBD1-208	ENST00000588009	PTPRF	P10586	1907 aa		2.68	□□□□□ -1.98
TUBD1-208	ENST00000588009	ANKRD36C	Q5JPF3	1778 aa		2.67	□□□□□ -1.98
TUBD1-208	ENST00000588009	SON	P18583	2426 aa	Known RBP	2.67	□□□□□ -1.98
TUBD1-208	ENST00000588009	SDHAF1	A6NFY7	115 aa		2.67	□□□□□ -1.98
TUBD1-208	ENST00000588009	KNCN	A6PVL3	124 aa		2.67	□□□□□ -1.98
TUBD1-208	ENST00000588009	OR7C1	O76099	320 aa	Predicted RBP	2.67	□□□□□ -1.98
TUBD1-208	ENST00000588009	RPSA	P08865	295 aa	Known RBP	2.67	□□□□□ -1.98
TUBD1-208	ENST00000588009	LGALS3	P17931	250 aa	Known RBP	2.67	□□□□□ -1.98
TUBD1-208	ENST00000588009	RAB13	P51153	203 aa		2.67	□□□□□ -1.98
TUBD1-208	ENST00000588009	SNRPD2	P62316	118 aa	Known RBP	2.67	□□□□□ -1.98
TUBD1-208	ENST00000588009	HIST1H3A	P68431	136 aa		2.67	□□□□□ -1.98
TUBD1-208	ENST00000588009	H3F3A	P84243	136 aa		2.67	□□□□□ -1.98
TUBD1-208	ENST00000588009	FOXF1	Q12946	379 aa		2.67	□□□□□ -1.98
TUBD1-208	ENST00000588009	GLT8D1	Q68CQ7	371 aa		2.67	□□□□□ -1.98
TUBD1-208	ENST00000588009	SMARCD3	Q6STE5	483 aa		2.67	□□□□□ -1.98
TUBD1-208	ENST00000588009	SSX8	Q7RTT4	187 aa		2.67	□□□□□ -1.98
TUBD1-208	ENST00000588009	ZNF675	Q8TD23	568 aa		2.67	□□□□□ -1.98
TUBD1-208	ENST00000588009	DOK5	Q9P104	306 aa		2.67	□□□□□ -1.98
TUBD1-208	ENST00000588009		V9GYQ6	96 aa		2.67	□□□□□ -1.98
TUBD1-208	ENST00000588009	DOCK2	Q92608	1830 aa		2.67	□□□□□ -1.98
TUBD1-208	ENST00000588009	EPPK1	P58107	5090 aa	Known RBP	2.67	□□□□□ -1.98
TUBD1-208	ENST00000588009	HYDIN	Q4G0P3	5121 aa		2.67	□□□□□ -1.98
TUBD1-208	ENST00000588009	TENM3	Q9P273	2699 aa		2.66	□□□□□ -1.98
TUBD1-208	ENST00000588009	TMEM269	A0A1B0GVZ9	245 aa		2.66	□□□□□ -1.98
TUBD1-208	ENST00000588009		A0A1W2PQD3	144 aa		2.66	□□□□□ -1.98
TUBD1-208	ENST00000588009	C11orf86	A6NJI1	115 aa		2.66	□□□□□ -1.98
TUBD1-208	ENST00000588009	FAAH	O00519	579 aa		2.66	□□□□□ -1.98
TUBD1-208	ENST00000588009	TXNDC9	O14530	226 aa		2.66	□□□□□ -1.98
TUBD1-208	ENST00000588009	GNRH2	O43555	120 aa		2.66	□□□□□ -1.98
TUBD1-208	ENST00000588009	ZNF728	P0DKX0	622 aa		2.66	□□□□□ -1.98
TUBD1-208	ENST00000588009	CD24	P25063	80 aa		2.66	□□□□□ -1.98
TUBD1-208	ENST00000588009	RPL5	P46777	297 aa	Known RBP	2.66	□□□□□ -1.98
TUBD1-208	ENST00000588009	GABRA4	P48169	554 aa		2.66	□□□□□ -1.98
TUBD1-208	ENST00000588009	CRYBA4	P53673	196 aa		2.66	□□□□□ -1.98
TUBD1-208	ENST00000588009	RPL30	P62888	115 aa	Known RBP	2.66	□□□□□ -1.98
TUBD1-208	ENST00000588009	TMED4	Q7Z7H5	227 aa		2.66	□□□□□ -1.98
TUBD1-208	ENST00000588009	TBC1D19	Q8N5T2	526 aa		2.66	□□□□□ -1.98
TUBD1-208	ENST00000588009	OR52L1	Q8NGH7	329 aa		2.66	□□□□□ -1.98
TUBD1-208	ENST00000588009	FAM172A	Q8WUF8	416 aa		2.66	□□□□□ -1.98
TUBD1-208	ENST00000588009	ZNF471	Q9BX82	626 aa	Predicted RBP	2.66	□□□□□ -1.98
TUBD1-208	ENST00000588009	RNASE7	Q9H1E1	156 aa	Known RBP	2.66	□□□□□ -1.98
TUBD1-208	ENST00000588009	C14orf105	Q9NVL8	296 aa		2.66	□□□□□ -1.98
TUBD1-208	ENST00000588009	SMPX	Q9UHP9	88 aa		2.66	□□□□□ -1.98
TUBD1-208	ENST00000588009	FAM215A	Q9Y5M1	114 aa		2.66	□□□□□ -1.98
TUBD1-208	ENST00000588009	ZNF532	Q9HCE3	1301 aa		2.66	□□□□□ -1.98
TUBD1-208	ENST00000588009	NUP98	P52948	1817 aa		2.65	□□□□□ -1.98
TUBD1-208	ENST00000588009	MAP1A	P78559	2803 aa	Predicted RBP	2.65	□□□□□ -1.98
TUBD1-208	ENST00000588009	PTPRB	P23467	1997 aa		2.65	□□□□□ -1.98
TUBD1-208	ENST00000588009		A0A0J9YY10	115 aa		2.65	□□□□□ -1.99
TUBD1-208	ENST00000588009		A0A1B0GX78	115 aa		2.65	□□□□□ -1.99
TUBD1-208	ENST00000588009		I3L521	148 aa		2.65	□□□□□ -1.99
TUBD1-208	ENST00000588009	HLA-DRB1	P01911	266 aa		2.65	□□□□□ -1.99
TUBD1-208	ENST00000588009	SRP19	P09132	144 aa	Known RBP	2.65	□□□□□ -1.99
TUBD1-208	ENST00000588009	GZMH	P20718	246 aa		2.65	□□□□□ -1.99
TUBD1-208	ENST00000588009	BLVRB	P30043	206 aa	Predicted RBP	2.65	□□□□□ -1.99
TUBD1-208	ENST00000588009	FXYD7	P58549	80 aa		2.65	□□□□□ -1.99
TUBD1-208	ENST00000588009	GRK1	Q15835	563 aa		2.65	□□□□□ -1.99
TUBD1-208	ENST00000588009		Q6ZS49	121 aa		2.65	□□□□□ -1.99
TUBD1-208	ENST00000588009	BTF3L4	Q96K17	158 aa		2.65	□□□□□ -1.99
TUBD1-208	ENST00000588009	ERMAP	Q96PL5	475 aa	Predicted RBP	2.65	□□□□□ -1.99
TUBD1-208	ENST00000588009	CMSS1	Q9BQ75	279 aa	Known RBP	2.65	□□□□□ -1.99
TUBD1-208	ENST00000588009	ULBP3	Q9BZM4	244 aa		2.65	□□□□□ -1.99
TUBD1-208	ENST00000588009	TRABD	Q9H4I3	376 aa		2.65	□□□□□ -1.99
TUBD1-208	ENST00000588009	NMNAT1	Q9HAN9	279 aa	Predicted RBP	2.65	□□□□□ -1.99
TUBD1-208	ENST00000588009	PRTFDC1	Q9NRG1	225 aa		2.65	□□□□□ -1.99
TUBD1-208	ENST00000588009	PSORS1C2	Q9UIG4	136 aa		2.65	□□□□□ -1.99
TUBD1-208	ENST00000588009	SCN10A	Q9Y5Y9	1956 aa		2.65	□□□□□ -1.99
TUBD1-208	ENST00000588009	HIVEP2	P31629	2446 aa		2.64	□□□□□ -1.99

Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms