RNA–Protein interactions for RNA: ENST00000582252.1

CCDC47-204, Transcript of coiled-coil domain containing 47, humanhuman

TSL 2 BASIC

Gene CCDC47, Length 1,719 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-204ENST00000582252 CDC42EP3Q9UKI2 254 aa17.83■□□□□ 0.44
CCDC47-204ENST00000582252 RNF24Q9Y225 148 aa17.83■□□□□ 0.44
CCDC47-204ENST00000582252 PEX7O00628 323 aa17.82■□□□□ 0.44
CCDC47-204ENST00000582252 TYMSP04818 313 aa17.82■□□□□ 0.44
CCDC47-204ENST00000582252 MSMBP08118 114 aa17.82■□□□□ 0.44
CCDC47-204ENST00000582252 GP9P14770 177 aa17.82■□□□□ 0.44
CCDC47-204ENST00000582252 KLF17Q5JT82 389 aaPredicted RBP17.82■□□□□ 0.44
CCDC47-204ENST00000582252 KRTAP1-3Q8IUG1 177 aa17.82■□□□□ 0.44
CCDC47-204ENST00000582252 C21orf62Q9NYP8 219 aa17.82■□□□□ 0.44
CCDC47-204ENST00000582252 FABP9Q0Z7S8 132 aa17.81■□□□□ 0.44
CCDC47-204ENST00000582252 Q56UQ5 140 aa17.81■□□□□ 0.44
CCDC47-204ENST00000582252 Q96MF0 132 aa17.81■□□□□ 0.44
CCDC47-204ENST00000582252 TXN2Q99757 166 aa17.81■□□□□ 0.44
CCDC47-204ENST00000582252 NOTCH2Q04721 2471 aa17.81■□□□□ 0.44
CCDC47-204ENST00000582252 TRAV9-1A0A075B6T8 112 aa17.81■□□□□ 0.44
CCDC47-204ENST00000582252 K7EN84 100 aa17.81■□□□□ 0.44
CCDC47-204ENST00000582252 EGR2P11161 476 aaPredicted RBP17.81■□□□□ 0.44
CCDC47-204ENST00000582252 BLNKQ8WV28 456 aa17.81■□□□□ 0.44
CCDC47-204ENST00000582252 TRAV40A0A0B4J280 105 aa17.8■□□□□ 0.44
CCDC47-204ENST00000582252 RNF223E7ERA6 249 aa17.8■□□□□ 0.44
CCDC47-204ENST00000582252 MYCNOSP40205 109 aa17.8■□□□□ 0.44
CCDC47-204ENST00000582252 RNF125Q96EQ8 232 aa17.8■□□□□ 0.44
CCDC47-204ENST00000582252 FOXC2Q99958 501 aa17.8■□□□□ 0.44
CCDC47-204ENST00000582252 MOB4Q9Y3A3 225 aa17.8■□□□□ 0.44
CCDC47-204ENST00000582252 ABCA1O95477 2261 aa17.8■□□□□ 0.44
CCDC47-204ENST00000582252 SLC25A5P05141 298 aaKnown RBP17.79■□□□□ 0.44
CCDC47-204ENST00000582252 S100A9P06702 114 aaKnown RBP17.79■□□□□ 0.44
CCDC47-204ENST00000582252 FCGR2BP31994 310 aaPredicted RBP17.79■□□□□ 0.44
CCDC47-204ENST00000582252 ERVFC1-1P60608 527 aa17.79■□□□□ 0.44
CCDC47-204ENST00000582252 RANP62826 216 aaKnown RBP17.79■□□□□ 0.44
CCDC47-204ENST00000582252 UNQ5815/PRO19632Q6UWF5 114 aa17.79■□□□□ 0.44
CCDC47-204ENST00000582252 VN1R17PQ8TDU5 208 aa17.79■□□□□ 0.44
CCDC47-204ENST00000582252 IGF2BP2-AS1Q96M15 143 aa17.79■□□□□ 0.44
CCDC47-204ENST00000582252 SHANK2-AS3Q9BTD1 123 aa17.79■□□□□ 0.44
CCDC47-204ENST00000582252 TMUB1Q9BVT8 246 aa17.79■□□□□ 0.44
CCDC47-204ENST00000582252 MEGF9Q9H1U4 602 aa17.79■□□□□ 0.44
CCDC47-204ENST00000582252 IL36BQ9NZH7 164 aa17.79■□□□□ 0.44
CCDC47-204ENST00000582252 TRAV20A0A0B4J274 112 aa17.78■□□□□ 0.44
CCDC47-204ENST00000582252 WI2-2373I1.2A0A1W2PRP0 233 aa17.78■□□□□ 0.44
CCDC47-204ENST00000582252 H3BRN7 92 aa17.78■□□□□ 0.44
CCDC47-204ENST00000582252 HIST1H2BKO60814 126 aa17.78■□□□□ 0.44
CCDC47-204ENST00000582252 GCGP01275 180 aa17.78■□□□□ 0.44
CCDC47-204ENST00000582252 S100A8P05109 93 aa17.78■□□□□ 0.44
CCDC47-204ENST00000582252 HIST1H2BJP06899 126 aa17.78■□□□□ 0.44
CCDC47-204ENST00000582252 HIST1H1EP10412 219 aaKnown RBP17.78■□□□□ 0.44
CCDC47-204ENST00000582252 HIST1H2BOP23527 126 aa17.78■□□□□ 0.44
CCDC47-204ENST00000582252 GATA3P23771 443 aa17.78■□□□□ 0.44
CCDC47-204ENST00000582252 S100A7P31151 101 aa17.78■□□□□ 0.44
CCDC47-204ENST00000582252 HIST1H2BBP33778 126 aa17.78■□□□□ 0.44
CCDC47-204ENST00000582252 HIST1H2BDP58876 126 aa17.78■□□□□ 0.44
CCDC47-204ENST00000582252 HIST1H2BCP62807 126 aa17.78■□□□□ 0.44
CCDC47-204ENST00000582252 HIST2H2BEQ16778 126 aa17.78■□□□□ 0.44
CCDC47-204ENST00000582252 HIST2H2BFQ5QNW6 126 aaPredicted RBP17.78■□□□□ 0.44
CCDC47-204ENST00000582252 ZNF600Q6ZNG1 722 aa17.78■□□□□ 0.44
CCDC47-204ENST00000582252 ZNF491Q8N8L2 437 aa17.78■□□□□ 0.44
CCDC47-204ENST00000582252 LINC01356Q8N9X3 169 aa17.78■□□□□ 0.44
CCDC47-204ENST00000582252 HIST1H2BHQ93079 126 aa17.78■□□□□ 0.44
CCDC47-204ENST00000582252 HIST1H2BNQ99877 126 aa17.78■□□□□ 0.44
CCDC47-204ENST00000582252 HIST1H2BMQ99879 126 aa17.78■□□□□ 0.44
CCDC47-204ENST00000582252 HSPB9Q9BQS6 159 aa17.78■□□□□ 0.44
CCDC47-204ENST00000582252 OSTCQ9NRP0 149 aa17.78■□□□□ 0.44
CCDC47-204ENST00000582252 EPDR1Q9UM22 224 aa17.78■□□□□ 0.44
CCDC47-204ENST00000582252 ZANQ9Y493 2812 aa17.78■□□□□ 0.44
CCDC47-204ENST00000582252 PGPA6NDG6 321 aa17.78■□□□□ 0.44
CCDC47-204ENST00000582252 OR2J3O76001 311 aa17.78■□□□□ 0.44
CCDC47-204ENST00000582252 IL4P05112 153 aa17.78■□□□□ 0.44
CCDC47-204ENST00000582252 KLK9Q2XQG4 91 aa17.78■□□□□ 0.44
CCDC47-204ENST00000582252 BPIFA4PQ86YQ2 179 aa17.78■□□□□ 0.44
CCDC47-204ENST00000582252 C5orf56Q8N8D9 126 aa17.78■□□□□ 0.44
CCDC47-204ENST00000582252 C5orf17Q8NAS9 161 aa17.78■□□□□ 0.44
CCDC47-204ENST00000582252 FBXL7Q9UJT9 491 aa17.78■□□□□ 0.44
CCDC47-204ENST00000582252 KLK9Q9UKQ9 250 aa17.78■□□□□ 0.44
CCDC47-204ENST00000582252 NDUFB8O95169 186 aa17.77■□□□□ 0.44
CCDC47-204ENST00000582252 NDUFA6P56556 154 aa17.77■□□□□ 0.44
CCDC47-204ENST00000582252 UBE2G1P62253 170 aa17.77■□□□□ 0.44
CCDC47-204ENST00000582252 RPL19P84098 196 aaKnown RBP17.77■□□□□ 0.44
CCDC47-204ENST00000582252 OR4F17Q8NGA8 305 aa17.77■□□□□ 0.44
CCDC47-204ENST00000582252 FLNAP21333 2647 aaKnown RBP17.77■□□□□ 0.43
CCDC47-204ENST00000582252 ISLRO14498 428 aa17.76■□□□□ 0.43
CCDC47-204ENST00000582252 ATP6V0E1O15342 81 aa17.76■□□□□ 0.43
CCDC47-204ENST00000582252 TRGC1P0CF51 173 aa17.76■□□□□ 0.43
CCDC47-204ENST00000582252 ECSCRQ19T08 205 aa17.76■□□□□ 0.43
CCDC47-204ENST00000582252 LINC00518Q8N0U6 118 aa17.76■□□□□ 0.43
CCDC47-204ENST00000582252 FRZBQ92765 325 aa17.76■□□□□ 0.43
CCDC47-204ENST00000582252 SMIM12Q96EX1 92 aa17.76■□□□□ 0.43
CCDC47-204ENST00000582252 C7orf69Q9H7B7 122 aa17.76■□□□□ 0.43
CCDC47-204ENST00000582252 GAR1Q9NY12 217 aaKnown RBP17.76■□□□□ 0.43
CCDC47-204ENST00000582252 MYO9AB2RTY4 2548 aa17.76■□□□□ 0.43
CCDC47-204ENST00000582252 A0A0U1RQK1 487 aa17.75■□□□□ 0.43
CCDC47-204ENST00000582252 ZNF320A2RRD8 509 aa17.75■□□□□ 0.43
CCDC47-204ENST00000582252 TMEM183BQ1AE95 376 aa17.75■□□□□ 0.43
CCDC47-204ENST00000582252 RPEL1Q2QD12 228 aa17.75■□□□□ 0.43
CCDC47-204ENST00000582252 LEMD1Q68G75 181 aa17.75■□□□□ 0.43
CCDC47-204ENST00000582252 ATG101Q9BSB4 218 aa17.75■□□□□ 0.43
CCDC47-204ENST00000582252 Q9H3A6 140 aa17.75■□□□□ 0.43
CCDC47-204ENST00000582252 OTORQ9NRC9 128 aa17.75■□□□□ 0.43
CCDC47-204ENST00000582252 HIF1ANQ9NWT6 349 aa17.75■□□□□ 0.43
CCDC47-204ENST00000582252 CSPG4Q6UVK1 2322 aa17.75■□□□□ 0.43
CCDC47-204ENST00000582252 IGHV3OR16-10A0A075B7F0 116 aa17.75■□□□□ 0.43
CCDC47-204ENST00000582252 MGST1P10620 155 aaKnown RBP17.75■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms