RNA–Protein interactions for RNA: ENST00000578904.1

CSNK1D-209, Transcript of casein kinase 1 delta, humanhuman

TSL 3

Gene CSNK1D, Length 1,269 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-209ENST00000578904 MAP1LC3B2A6NCE7 125 aa10.75□□□□□ -0.69
CSNK1D-209ENST00000578904 CXorf1O96002 111 aa10.75□□□□□ -0.69
CSNK1D-209ENST00000578904 HSPB1P04792 205 aaKnown RBP10.75□□□□□ -0.69
CSNK1D-209ENST00000578904 ZP3P21754 424 aa10.75□□□□□ -0.69
CSNK1D-209ENST00000578904 RPEL1Q2QD12 228 aa10.75□□□□□ -0.69
CSNK1D-209ENST00000578904 TCTEX1D4Q5JR98 221 aa10.75□□□□□ -0.69
CSNK1D-209ENST00000578904 SHISA2Q6UWI4 295 aa10.75□□□□□ -0.69
CSNK1D-209ENST00000578904 PQLC2Q6ZP29 291 aa10.75□□□□□ -0.69
CSNK1D-209ENST00000578904 RPP25LQ8N5L8 163 aaKnown RBP10.75□□□□□ -0.69
CSNK1D-209ENST00000578904 C4orf3Q8WVX3 66 aa10.75□□□□□ -0.69
CSNK1D-209ENST00000578904 DPF1Q92782 380 aa10.75□□□□□ -0.69
CSNK1D-209ENST00000578904 RAB24Q969Q5 203 aa10.75□□□□□ -0.69
CSNK1D-209ENST00000578904 CHRDL1Q9BU40 450 aa10.75□□□□□ -0.69
CSNK1D-209ENST00000578904 MAP1LC3BQ9GZQ8 125 aa10.75□□□□□ -0.69
CSNK1D-209ENST00000578904 HRH4Q9H3N8 390 aa10.75□□□□□ -0.69
CSNK1D-209ENST00000578904 VSIRQ9H7M9 311 aa10.75□□□□□ -0.69
CSNK1D-209ENST00000578904 SLC25A22Q9H936 323 aa10.75□□□□□ -0.69
CSNK1D-209ENST00000578904 PLA2G2EQ9NZK7 142 aa10.75□□□□□ -0.69
CSNK1D-209ENST00000578904 DOK5Q9P104 306 aa10.75□□□□□ -0.69
CSNK1D-209ENST00000578904 A0A1W2PRX2 142 aa10.74□□□□□ -0.69
CSNK1D-209ENST00000578904 IFNA1P01562 189 aa10.74□□□□□ -0.69
CSNK1D-209ENST00000578904 C8orf88P0DMB2 117 aa10.74□□□□□ -0.69
CSNK1D-209ENST00000578904 BMI1P35226 326 aa10.74□□□□□ -0.69
CSNK1D-209ENST00000578904 ADMP35318 185 aa10.74□□□□□ -0.69
CSNK1D-209ENST00000578904 TAGLN2P37802 199 aaKnown RBP10.74□□□□□ -0.69
CSNK1D-209ENST00000578904 FHITP49789 147 aa10.74□□□□□ -0.69
CSNK1D-209ENST00000578904 KIAA0141Q14154 515 aaPredicted RBP10.74□□□□□ -0.69
CSNK1D-209ENST00000578904 IL34Q6ZMJ4 242 aa10.74□□□□□ -0.69
CSNK1D-209ENST00000578904 LINC00305Q7Z4B0 112 aa10.74□□□□□ -0.69
CSNK1D-209ENST00000578904 METTL26Q96S19 204 aa10.74□□□□□ -0.69
CSNK1D-209ENST00000578904 MED9Q9NWA0 146 aa10.74□□□□□ -0.69
CSNK1D-209ENST00000578904 TSSC4Q9Y5U2 329 aaPredicted RBP10.74□□□□□ -0.69
CSNK1D-209ENST00000578904 ANK2Q01484 3957 aa10.73□□□□□ -0.69
CSNK1D-209ENST00000578904 PPP5D1E7EU14 171 aa10.73□□□□□ -0.69
CSNK1D-209ENST00000578904 PSMB3P49720 205 aa10.73□□□□□ -0.69
CSNK1D-209ENST00000578904 LCN15Q6UWW0 184 aa10.73□□□□□ -0.69
CSNK1D-209ENST00000578904 TOMM20LQ6UXN7 152 aa10.73□□□□□ -0.69
CSNK1D-209ENST00000578904 NDUFA11Q86Y39 141 aa10.73□□□□□ -0.69
CSNK1D-209ENST00000578904 GPHB5Q86YW7 130 aa10.73□□□□□ -0.69
CSNK1D-209ENST00000578904 LYPD6BQ8NI32 183 aa10.73□□□□□ -0.69
CSNK1D-209ENST00000578904 TMEM37Q8WXS4 190 aa10.73□□□□□ -0.69
CSNK1D-209ENST00000578904 MARC2Q969Z3 335 aa10.73□□□□□ -0.69
CSNK1D-209ENST00000578904 MRPL27Q9P0M9 148 aaKnown RBP10.73□□□□□ -0.69
CSNK1D-209ENST00000578904 STAB1Q9NY15 2570 aa10.73□□□□□ -0.69
CSNK1D-209ENST00000578904 A0A1W2PS18 150 aa10.72□□□□□ -0.69
CSNK1D-209ENST00000578904 LINC00862A6NCI5 91 aa10.72□□□□□ -0.69
CSNK1D-209ENST00000578904 STAG3L2P0CL84 134 aa10.72□□□□□ -0.69
CSNK1D-209ENST00000578904 STAG3L3P0CL85 134 aa10.72□□□□□ -0.69
CSNK1D-209ENST00000578904 NPPCP23582 126 aa10.72□□□□□ -0.69
CSNK1D-209ENST00000578904 NSUN5P1Q3KNT7 163 aa10.72□□□□□ -0.69
CSNK1D-209ENST00000578904 GCSAMLQ5JQS6 135 aa10.72□□□□□ -0.69
CSNK1D-209ENST00000578904 IQCF2Q8IXL9 164 aa10.72□□□□□ -0.69
CSNK1D-209ENST00000578904 KLHL30-AS1Q8NEE0 82 aa10.72□□□□□ -0.69
CSNK1D-209ENST00000578904 GRAMD2BQ96HH9 432 aa10.72□□□□□ -0.69
CSNK1D-209ENST00000578904 OR5B12Q96R08 314 aa10.72□□□□□ -0.69
CSNK1D-209ENST00000578904 SLC25A39Q9BZJ4 359 aaPredicted RBP10.72□□□□□ -0.69
CSNK1D-209ENST00000578904 TMEM231Q9H6L2 316 aa10.72□□□□□ -0.69
CSNK1D-209ENST00000578904 SEPSECSQ9HD40 501 aaKnown RBP10.72□□□□□ -0.69
CSNK1D-209ENST00000578904 TMEM167BQ9NRX6 74 aa10.72□□□□□ -0.69
CSNK1D-209ENST00000578904 UFC1Q9Y3C8 167 aa10.72□□□□□ -0.69
CSNK1D-209ENST00000578904 NBEAL1Q6ZS30 2694 aa10.71□□□□□ -0.69
CSNK1D-209ENST00000578904 TENM1Q9UKZ4 2725 aa10.71□□□□□ -0.69
CSNK1D-209ENST00000578904 RAB19A4D1S5 217 aa10.71□□□□□ -0.69
CSNK1D-209ENST00000578904 LINC01619G3V211 115 aa10.71□□□□□ -0.69
CSNK1D-209ENST00000578904 OR7C2O60412 319 aa10.71□□□□□ -0.69
CSNK1D-209ENST00000578904 PATE2Q6UY27 113 aa10.71□□□□□ -0.69
CSNK1D-209ENST00000578904 PCNPQ8WW12 178 aaKnown RBP10.71□□□□□ -0.69
CSNK1D-209ENST00000578904 GPR82Q96P67 336 aa10.71□□□□□ -0.69
CSNK1D-209ENST00000578904 SHANK2-AS3Q9BTD1 123 aa10.71□□□□□ -0.69
CSNK1D-209ENST00000578904 C20orf24Q9BUV8 137 aa10.71□□□□□ -0.69
CSNK1D-209ENST00000578904 MANBALQ9NQG1 85 aa10.71□□□□□ -0.69
CSNK1D-209ENST00000578904 IGHV3-35A0A0C4DH35 117 aa10.7□□□□□ -0.7
CSNK1D-209ENST00000578904 ZNF320A2RRD8 509 aa10.7□□□□□ -0.7
CSNK1D-209ENST00000578904 I3L521 148 aa10.7□□□□□ -0.7
CSNK1D-209ENST00000578904 K7EMT4 169 aa10.7□□□□□ -0.7
CSNK1D-209ENST00000578904 ARL14EPLP0DKL9 152 aa10.7□□□□□ -0.7
CSNK1D-209ENST00000578904 PMS2P11Q13670 270 aa10.7□□□□□ -0.7
CSNK1D-209ENST00000578904 ZNF726P1Q15940 193 aa10.7□□□□□ -0.7
CSNK1D-209ENST00000578904 C1orf194Q5T5A4 169 aa10.7□□□□□ -0.7
CSNK1D-209ENST00000578904 C18orf65Q6ZTR6 163 aa10.7□□□□□ -0.7
CSNK1D-209ENST00000578904 MIR17HGQ75NE6 70 aa10.7□□□□□ -0.7
CSNK1D-209ENST00000578904 BPIFA4PQ86YQ2 179 aa10.7□□□□□ -0.7
CSNK1D-209ENST00000578904 PAXXQ9BUH6 204 aa10.7□□□□□ -0.7
CSNK1D-209ENST00000578904 SMDT1Q9H4I9 107 aa10.7□□□□□ -0.7
CSNK1D-209ENST00000578904 ZFAND3Q9H8U3 227 aa10.7□□□□□ -0.7
CSNK1D-209ENST00000578904 ZNF98A6NK75 572 aa10.69□□□□□ -0.7
CSNK1D-209ENST00000578904 ADARB2-AS1A8MUL3 147 aa10.69□□□□□ -0.7
CSNK1D-209ENST00000578904 H3BRN7 92 aa10.69□□□□□ -0.7
CSNK1D-209ENST00000578904 LGALS9O00182 355 aa10.69□□□□□ -0.7
CSNK1D-209ENST00000578904 HMGB3O15347 200 aaKnown RBP10.69□□□□□ -0.7
CSNK1D-209ENST00000578904 TRBV12-3P01733 135 aa10.69□□□□□ -0.7
CSNK1D-209ENST00000578904 RPL7P18124 248 aaKnown RBP10.69□□□□□ -0.7
CSNK1D-209ENST00000578904 FGF8P55075 233 aaPredicted RBP10.69□□□□□ -0.7
CSNK1D-209ENST00000578904 PEA15Q15121 130 aa10.69□□□□□ -0.7
CSNK1D-209ENST00000578904 USF2Q15853 346 aaPredicted RBP10.69□□□□□ -0.7
CSNK1D-209ENST00000578904 C8orf86Q6ZUL3 223 aa10.69□□□□□ -0.7
CSNK1D-209ENST00000578904 COMMD7Q86VX2 200 aa10.69□□□□□ -0.7
CSNK1D-209ENST00000578904 C1QL4Q86Z23 238 aa10.69□□□□□ -0.7
CSNK1D-209ENST00000578904 OR4F17Q8NGA8 305 aa10.69□□□□□ -0.7
CSNK1D-209ENST00000578904 OR1N2Q8NGR9 330 aa10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms