RNA–Protein interactions for RNA: ENST00000578430.1

SRSF1-202, Transcript of serine and arginine rich splicing factor 1, humanhuman

TSL 2

Gene SRSF1, Length 689 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-202ENST00000578430 PATE2Q6UY27 113 aa10.34□□□□□ -0.75
SRSF1-202ENST00000578430 GPHB5Q86YW7 130 aa10.34□□□□□ -0.75
SRSF1-202ENST00000578430 MED9Q9NWA0 146 aa10.34□□□□□ -0.75
SRSF1-202ENST00000578430 TSSC4Q9Y5U2 329 aaPredicted RBP10.34□□□□□ -0.75
SRSF1-202ENST00000578430 MAP1LC3B2A6NCE7 125 aa10.33□□□□□ -0.76
SRSF1-202ENST00000578430 PPP5D1E7EU14 171 aa10.33□□□□□ -0.76
SRSF1-202ENST00000578430 C8orf88P0DMB2 117 aa10.33□□□□□ -0.76
SRSF1-202ENST00000578430 ZP3P21754 424 aa10.33□□□□□ -0.76
SRSF1-202ENST00000578430 FAM106AQ4KMX7 169 aa10.33□□□□□ -0.76
SRSF1-202ENST00000578430 STXBP6Q8NFX7 210 aa10.33□□□□□ -0.76
SRSF1-202ENST00000578430 SFT2D1Q8WV19 159 aa10.33□□□□□ -0.76
SRSF1-202ENST00000578430 PBDC1Q9BVG4 233 aa10.33□□□□□ -0.76
SRSF1-202ENST00000578430 MAP1LC3BQ9GZQ8 125 aa10.33□□□□□ -0.76
SRSF1-202ENST00000578430 ZFAND3Q9H8U3 227 aa10.33□□□□□ -0.76
SRSF1-202ENST00000578430 SLC25A22Q9H936 323 aa10.33□□□□□ -0.76
SRSF1-202ENST00000578430 TECRQ9NZ01 308 aaKnown RBP10.33□□□□□ -0.76
SRSF1-202ENST00000578430 DOK5Q9P104 306 aa10.33□□□□□ -0.76
SRSF1-202ENST00000578430 RABAC1Q9UI14 185 aa10.33□□□□□ -0.76
SRSF1-202ENST00000578430 LINC00862A6NCI5 91 aa10.32□□□□□ -0.76
SRSF1-202ENST00000578430 CXorf1O96002 111 aa10.32□□□□□ -0.76
SRSF1-202ENST00000578430 TRBV12-3P01733 135 aa10.32□□□□□ -0.76
SRSF1-202ENST00000578430 STAG3L2P0CL84 134 aa10.32□□□□□ -0.76
SRSF1-202ENST00000578430 STAG3L3P0CL85 134 aa10.32□□□□□ -0.76
SRSF1-202ENST00000578430 CD28P10747 220 aa10.32□□□□□ -0.76
SRSF1-202ENST00000578430 PMS2P11Q13670 270 aa10.32□□□□□ -0.76
SRSF1-202ENST00000578430 USF2Q15853 346 aaPredicted RBP10.32□□□□□ -0.76
SRSF1-202ENST00000578430 KHDC3LQ587J8 217 aa10.32□□□□□ -0.76
SRSF1-202ENST00000578430 KHDC1LQ5JSQ8 128 aa10.32□□□□□ -0.76
SRSF1-202ENST00000578430 PQLC2Q6ZP29 291 aa10.32□□□□□ -0.76
SRSF1-202ENST00000578430 LINC00305Q7Z4B0 112 aa10.32□□□□□ -0.76
SRSF1-202ENST00000578430 ZNF414Q96IQ9 312 aa10.32□□□□□ -0.76
SRSF1-202ENST00000578430 OR5B12Q96R08 314 aa10.32□□□□□ -0.76
SRSF1-202ENST00000578430 SEPSECSQ9HD40 501 aaKnown RBP10.32□□□□□ -0.76
SRSF1-202ENST00000578430 PPT1P50897 306 aa10.31□□□□□ -0.76
SRSF1-202ENST00000578430 SRSF2Q01130 221 aaKnown RBP10.31□□□□□ -0.76
SRSF1-202ENST00000578430 RPEL1Q2QD12 228 aa10.31□□□□□ -0.76
SRSF1-202ENST00000578430 LCN15Q6UWW0 184 aa10.31□□□□□ -0.76
SRSF1-202ENST00000578430 IL34Q6ZMJ4 242 aa10.31□□□□□ -0.76
SRSF1-202ENST00000578430 MIR17HGQ75NE6 70 aa10.31□□□□□ -0.76
SRSF1-202ENST00000578430 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP10.31□□□□□ -0.76
SRSF1-202ENST00000578430 KLHL30-AS1Q8NEE0 82 aa10.31□□□□□ -0.76
SRSF1-202ENST00000578430 PCNPQ8WW12 178 aaKnown RBP10.31□□□□□ -0.76
SRSF1-202ENST00000578430 TMEM190Q8WZ59 177 aa10.31□□□□□ -0.76
SRSF1-202ENST00000578430 METTL26Q96S19 204 aa10.31□□□□□ -0.76
SRSF1-202ENST00000578430 SHANK2-AS3Q9BTD1 123 aa10.31□□□□□ -0.76
SRSF1-202ENST00000578430 SLC25A39Q9BZJ4 359 aaPredicted RBP10.31□□□□□ -0.76
SRSF1-202ENST00000578430 HRH4Q9H3N8 390 aa10.31□□□□□ -0.76
SRSF1-202ENST00000578430 IGHV3-35A0A0C4DH35 117 aa10.3□□□□□ -0.76
SRSF1-202ENST00000578430 LINC01619G3V211 115 aa10.3□□□□□ -0.76
SRSF1-202ENST00000578430 H3BRN7 92 aa10.3□□□□□ -0.76
SRSF1-202ENST00000578430 K7EMT4 169 aa10.3□□□□□ -0.76
SRSF1-202ENST00000578430 LGALS9O00182 355 aa10.3□□□□□ -0.76
SRSF1-202ENST00000578430 NPPCP23582 126 aa10.3□□□□□ -0.76
SRSF1-202ENST00000578430 PSMB3P49720 205 aa10.3□□□□□ -0.76
SRSF1-202ENST00000578430 C1orf194Q5T5A4 169 aa10.3□□□□□ -0.76
SRSF1-202ENST00000578430 SPATA31B1PQ5VZV4 182 aa10.3□□□□□ -0.76
SRSF1-202ENST00000578430 SSX7Q7RTT5 188 aa10.3□□□□□ -0.76
SRSF1-202ENST00000578430 REC114Q7Z4M0 266 aa10.3□□□□□ -0.76
SRSF1-202ENST00000578430 DPF1Q92782 380 aa10.3□□□□□ -0.76
SRSF1-202ENST00000578430 NARS2Q96I59 477 aaKnown RBP10.3□□□□□ -0.76
SRSF1-202ENST00000578430 UHRF2Q96PU4 802 aa10.3□□□□□ -0.76
SRSF1-202ENST00000578430 UFC1Q9Y3C8 167 aa10.3□□□□□ -0.76
SRSF1-202ENST00000578430 IGHV4OR15-8A0A075B7B6 117 aa10.29□□□□□ -0.76
SRSF1-202ENST00000578430 A0A087WW49 117 aa10.29□□□□□ -0.76
SRSF1-202ENST00000578430 IFNA1P01562 189 aa10.29□□□□□ -0.76
SRSF1-202ENST00000578430 CRYBB3P26998 211 aa10.29□□□□□ -0.76
SRSF1-202ENST00000578430 TAGLN2P37802 199 aaKnown RBP10.29□□□□□ -0.76
SRSF1-202ENST00000578430 NDUFA11Q86Y39 141 aa10.29□□□□□ -0.76
SRSF1-202ENST00000578430 OR1N2Q8NGR9 330 aa10.29□□□□□ -0.76
SRSF1-202ENST00000578430 MARC2Q969Z3 335 aa10.29□□□□□ -0.76
SRSF1-202ENST00000578430 FAM167A-AS1Q96KT0 104 aa10.29□□□□□ -0.76
SRSF1-202ENST00000578430 CITED2Q99967 270 aaPredicted RBP10.29□□□□□ -0.76
SRSF1-202ENST00000578430 TMEM167BQ9NRX6 74 aa10.29□□□□□ -0.76
SRSF1-202ENST00000578430 TMEM14CQ9P0S9 112 aa10.29□□□□□ -0.76
SRSF1-202ENST00000578430 ANK2Q01484 3957 aa10.29□□□□□ -0.76
SRSF1-202ENST00000578430 RAB19A4D1S5 217 aa10.28□□□□□ -0.76
SRSF1-202ENST00000578430 ZNF98A6NK75 572 aa10.28□□□□□ -0.76
SRSF1-202ENST00000578430 OR7C2O60412 319 aa10.28□□□□□ -0.76
SRSF1-202ENST00000578430 ARL14EPLP0DKL9 152 aa10.28□□□□□ -0.76
SRSF1-202ENST00000578430 GCHFRP30047 84 aa10.28□□□□□ -0.76
SRSF1-202ENST00000578430 HOXD3P31249 432 aaPredicted RBP10.28□□□□□ -0.76
SRSF1-202ENST00000578430 BMI1P35226 326 aa10.28□□□□□ -0.76
SRSF1-202ENST00000578430 BPIFA4PQ86YQ2 179 aa10.28□□□□□ -0.76
SRSF1-202ENST00000578430 C1QL4Q86Z23 238 aa10.28□□□□□ -0.76
SRSF1-202ENST00000578430 GPR82Q96P67 336 aa10.28□□□□□ -0.76
SRSF1-202ENST00000578430 C20orf24Q9BUV8 137 aa10.28□□□□□ -0.76
SRSF1-202ENST00000578430 SLC25A2Q9BXI2 301 aa10.28□□□□□ -0.76
SRSF1-202ENST00000578430 DAZ1Q9NQZ3 744 aaKnown RBP10.28□□□□□ -0.76
SRSF1-202ENST00000578430 U3KQE9 123 aa10.28□□□□□ -0.76
SRSF1-202ENST00000578430 ARL2-SNX15V9GYD0 113 aa10.28□□□□□ -0.76
SRSF1-202ENST00000578430 A0A1W2PS18 150 aa10.27□□□□□ -0.77
SRSF1-202ENST00000578430 ZNF320A2RRD8 509 aa10.27□□□□□ -0.77
SRSF1-202ENST00000578430 A8MWP6 167 aa10.27□□□□□ -0.77
SRSF1-202ENST00000578430 HMGB3O15347 200 aaKnown RBP10.27□□□□□ -0.77
SRSF1-202ENST00000578430 RPL7P18124 248 aaKnown RBP10.27□□□□□ -0.77
SRSF1-202ENST00000578430 FGF8P55075 233 aaPredicted RBP10.27□□□□□ -0.77
SRSF1-202ENST00000578430 KLF5Q13887 457 aaPredicted RBP10.27□□□□□ -0.77
SRSF1-202ENST00000578430 AWAT1Q58HT5 328 aa10.27□□□□□ -0.77
SRSF1-202ENST00000578430 MORN5Q5VZ52 161 aa10.27□□□□□ -0.77
SRSF1-202ENST00000578430 UNQ9165/PRO28630Q6UXU0 137 aa10.27□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms