RNA–Protein interactions for RNA: ENST00000578172.1

NDEL1-204, Transcript of nudE neurodevelopment protein 1 like 1, humanhuman

Gene NDEL1, Length 3,927 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDEL1-204ENST00000578172 NMUP48645 174 aa11.03□□□□□ -0.64
NDEL1-204ENST00000578172 PPOXP50336 477 aa11.03□□□□□ -0.64
NDEL1-204ENST00000578172 CTSZQ9UBR2 303 aa11.03□□□□□ -0.64
NDEL1-204ENST00000578172 LINC00312Q9Y6C7 94 aa11.03□□□□□ -0.64
NDEL1-204ENST00000578172 DDB2Q92466 427 aa11.03□□□□□ -0.64
NDEL1-204ENST00000578172 RAB1CQ92928 201 aa11.03□□□□□ -0.64
NDEL1-204ENST00000578172 F11RQ9Y624 299 aaKnown RBP11.03□□□□□ -0.64
NDEL1-204ENST00000578172 OR4C46A6NHA9 309 aa11.03□□□□□ -0.64
NDEL1-204ENST00000578172 IGHV3OR16-10A0A075B7F0 116 aa11.02□□□□□ -0.65
NDEL1-204ENST00000578172 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP11.02□□□□□ -0.65
NDEL1-204ENST00000578172 HYPMO75409 117 aa11.02□□□□□ -0.65
NDEL1-204ENST00000578172 FCGR2BP31994 310 aaPredicted RBP11.02□□□□□ -0.65
NDEL1-204ENST00000578172 PRR20EP86478 221 aa11.02□□□□□ -0.65
NDEL1-204ENST00000578172 PRR20CP86479 221 aa11.02□□□□□ -0.65
NDEL1-204ENST00000578172 PRR20DP86480 221 aa11.02□□□□□ -0.65
NDEL1-204ENST00000578172 PRR20BP86481 221 aa11.02□□□□□ -0.65
NDEL1-204ENST00000578172 PRR20AP86496 221 aa11.02□□□□□ -0.65
NDEL1-204ENST00000578172 SAPCD1Q5SSQ6 148 aa11.02□□□□□ -0.65
NDEL1-204ENST00000578172 SLC25A34Q6PIV7 304 aa11.02□□□□□ -0.65
NDEL1-204ENST00000578172 BPIFA4PQ86YQ2 179 aa11.02□□□□□ -0.65
NDEL1-204ENST00000578172 TP53TG3Q9ULZ0 132 aa11.02□□□□□ -0.65
NDEL1-204ENST00000578172 IGHV1-69-2A0A0G2JMI3 117 aa11.02□□□□□ -0.65
NDEL1-204ENST00000578172 M0R3E3 92 aa11.02□□□□□ -0.65
NDEL1-204ENST00000578172 C3orf79P0CE67 100 aa11.02□□□□□ -0.65
NDEL1-204ENST00000578172 MPV17L2Q567V2 206 aa11.02□□□□□ -0.65
NDEL1-204ENST00000578172 AMMECR1LQ6DCA0 310 aa11.02□□□□□ -0.65
NDEL1-204ENST00000578172 Q71RC1 249 aaPredicted RBP11.02□□□□□ -0.65
NDEL1-204ENST00000578172 FAM57AQ8TBR7 257 aa11.02□□□□□ -0.65
NDEL1-204ENST00000578172 RNASEH2CQ8TDP1 164 aaKnown RBP11.02□□□□□ -0.65
NDEL1-204ENST00000578172 HLA-DQA1P01909 254 aa11.02□□□□□ -0.65
NDEL1-204ENST00000578172 AMY1AP04745 511 aa11.02□□□□□ -0.65
NDEL1-204ENST00000578172 TMEM116Q8NCL8 245 aa11.02□□□□□ -0.65
NDEL1-204ENST00000578172 RNASE6Q93091 150 aaKnown RBP11.02□□□□□ -0.65
NDEL1-204ENST00000578172 RASL11BQ9BPW5 248 aa11.02□□□□□ -0.65
NDEL1-204ENST00000578172 SFXN3Q9BWM7 321 aa11.02□□□□□ -0.65
NDEL1-204ENST00000578172 LINC00614P0C842 121 aa11.01□□□□□ -0.65
NDEL1-204ENST00000578172 CEACAM8P31997 349 aaPredicted RBP11.01□□□□□ -0.65
NDEL1-204ENST00000578172 VSTM2AQ8TAG5 236 aa11.01□□□□□ -0.65
NDEL1-204ENST00000578172 MAP1LC3CQ9BXW4 147 aa11.01□□□□□ -0.65
NDEL1-204ENST00000578172 MYO9AB2RTY4 2548 aa11.01□□□□□ -0.65
NDEL1-204ENST00000578172 NIT1Q86X76 327 aa11.01□□□□□ -0.65
NDEL1-204ENST00000578172 RNASE8Q8TDE3 154 aaKnown RBP11.01□□□□□ -0.65
NDEL1-204ENST00000578172 SRSF12Q8WXF0 261 aaKnown RBP11.01□□□□□ -0.65
NDEL1-204ENST00000578172 SLC25A2Q9BXI2 301 aa11.01□□□□□ -0.65
NDEL1-204ENST00000578172 ZNF324O75467 553 aaPredicted RBP11.01□□□□□ -0.65
NDEL1-204ENST00000578172 MT-ND6P03923 174 aa11.01□□□□□ -0.65
NDEL1-204ENST00000578172 CA7P43166 264 aa11.01□□□□□ -0.65
NDEL1-204ENST00000578172 NUP35Q8NFH5 326 aa11.01□□□□□ -0.65
NDEL1-204ENST00000578172 OSR1Q8TAX0 266 aaPredicted RBP11.01□□□□□ -0.65
NDEL1-204ENST00000578172 C2CD3Q4AC94 2353 aa11□□□□□ -0.65
NDEL1-204ENST00000578172 PPIAL4CA0A0B4J2A2 164 aa11□□□□□ -0.65
NDEL1-204ENST00000578172 CD3EP07766 207 aa11□□□□□ -0.65
NDEL1-204ENST00000578172 PPIAL4GP0DN37 164 aa11□□□□□ -0.65
NDEL1-204ENST00000578172 TBR1Q16650 682 aa11□□□□□ -0.65
NDEL1-204ENST00000578172 PERPQ96FX8 193 aa11□□□□□ -0.65
NDEL1-204ENST00000578172 C17orf77Q96MU5 243 aa11□□□□□ -0.65
NDEL1-204ENST00000578172 PRSS46E5RG02 174 aa11□□□□□ -0.65
NDEL1-204ENST00000578172 TMEM178BH3BS89 294 aa11□□□□□ -0.65
NDEL1-204ENST00000578172 LHBP01229 141 aa11□□□□□ -0.65
NDEL1-204ENST00000578172 RELQ04864 619 aaPredicted RBP11□□□□□ -0.65
NDEL1-204ENST00000578172 NGBQ9NPG2 151 aa11□□□□□ -0.65
NDEL1-204ENST00000578172 A0A1W2PS18 150 aa11□□□□□ -0.65
NDEL1-204ENST00000578172 hDV102S1A0JD36 115 aa11□□□□□ -0.65
NDEL1-204ENST00000578172 CCL21O00585 134 aa11□□□□□ -0.65
NDEL1-204ENST00000578172 PSG1P11464 419 aa11□□□□□ -0.65
NDEL1-204ENST00000578172 GUSBP1Q15486 140 aa11□□□□□ -0.65
NDEL1-204ENST00000578172 Q6ZS92 163 aa11□□□□□ -0.65
NDEL1-204ENST00000578172 ZNF207O43670 478 aaKnown RBP10.99□□□□□ -0.65
NDEL1-204ENST00000578172 TYMSP04818 313 aa10.99□□□□□ -0.65
NDEL1-204ENST00000578172 IL4P05112 153 aa10.99□□□□□ -0.65
NDEL1-204ENST00000578172 PATE2Q6UY27 113 aa10.99□□□□□ -0.65
NDEL1-204ENST00000578172 C1orf174Q8IYL3 243 aa10.99□□□□□ -0.65
NDEL1-204ENST00000578172 E7EQL1 145 aa10.99□□□□□ -0.65
NDEL1-204ENST00000578172 BTF3P20290 206 aaKnown RBP10.99□□□□□ -0.65
NDEL1-204ENST00000578172 ARL6IP6Q8N6S5 226 aa10.99□□□□□ -0.65
NDEL1-204ENST00000578172 PRSS33Q8NF86 280 aa10.99□□□□□ -0.65
NDEL1-204ENST00000578172 Q9H3A6 140 aa10.99□□□□□ -0.65
NDEL1-204ENST00000578172 SONP18583 2426 aaKnown RBP10.99□□□□□ -0.65
NDEL1-204ENST00000578172 GPX1P07203 203 aa10.99□□□□□ -0.65
NDEL1-204ENST00000578172 TMEM136Q6ZRR5 245 aa10.99□□□□□ -0.65
NDEL1-204ENST00000578172 MEGF9Q9H1U4 602 aa10.99□□□□□ -0.65
NDEL1-204ENST00000578172 HIF1ANQ9NWT6 349 aa10.99□□□□□ -0.65
NDEL1-204ENST00000578172 IGLV3-9A0A075B6K5 115 aa10.98□□□□□ -0.65
NDEL1-204ENST00000578172 TCRBV4S1A1TA0A5B7 111 aa10.98□□□□□ -0.65
NDEL1-204ENST00000578172 OR2J3O76001 311 aa10.98□□□□□ -0.65
NDEL1-204ENST00000578172 PLP1P60201 277 aa10.98□□□□□ -0.65
NDEL1-204ENST00000578172 CX3CL1P78423 397 aa10.98□□□□□ -0.65
NDEL1-204ENST00000578172 C2orf83Q53S99 150 aa10.98□□□□□ -0.65
NDEL1-204ENST00000578172 SPOCK3Q9BQ16 436 aa10.98□□□□□ -0.65
NDEL1-204ENST00000578172 DEFB104AQ8WTQ1 72 aa10.98□□□□□ -0.65
NDEL1-204ENST00000578172 ZC2HC1AQ96GY0 325 aa10.98□□□□□ -0.65
NDEL1-204ENST00000578172 TXNDC17Q9BRA2 123 aa10.98□□□□□ -0.65
NDEL1-204ENST00000578172 NDUFA4L2Q9NRX3 87 aa10.98□□□□□ -0.65
NDEL1-204ENST00000578172 HIGD1AQ9Y241 93 aa10.98□□□□□ -0.65
NDEL1-204ENST00000578172 TNRC6BQ9UPQ9 1833 aaKnown RBP10.98□□□□□ -0.65
NDEL1-204ENST00000578172 WNK1Q9H4A3 2382 aa10.98□□□□□ -0.65
NDEL1-204ENST00000578172 USP9XQ93008 2570 aaPredicted RBP10.98□□□□□ -0.65
NDEL1-204ENST00000578172 GNG7O60262 68 aa10.98□□□□□ -0.65
NDEL1-204ENST00000578172 CT45A10P0DMU9 189 aa10.98□□□□□ -0.65
NDEL1-204ENST00000578172 HIST1H1EP10412 219 aaKnown RBP10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms