RNA–Protein interactions for RNA: ENST00000577474.2

TRAPPC8-203, Transcript of trafficking protein particle complex 8, humanhuman

TSL 4

Gene TRAPPC8, Length 862 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC8-203ENST00000577474 FKBP1CQ5VVH2 108 aa2.07□□□□□ -2.08
TRAPPC8-203ENST00000577474 SAMD13Q5VXD3 122 aa2.07□□□□□ -2.08
TRAPPC8-203ENST00000577474 EFCAB11Q9BUY7 163 aa2.07□□□□□ -2.08
TRAPPC8-203ENST00000577474 OR52A1Q9UKL2 312 aa2.07□□□□□ -2.08
TRAPPC8-203ENST00000577474 ZNF106Q9H2Y7 1883 aaKnown RBP2.07□□□□□ -2.08
TRAPPC8-203ENST00000577474 NCAPD3P42695 1498 aa2.07□□□□□ -2.08
TRAPPC8-203ENST00000577474 NUMA1Q14980 2115 aa2.06□□□□□ -2.08
TRAPPC8-203ENST00000577474 ZCCHC11Q5TAX3 1644 aaKnown RBP2.06□□□□□ -2.08
TRAPPC8-203ENST00000577474 TIMM17BO60830 172 aa2.06□□□□□ -2.08
TRAPPC8-203ENST00000577474 CST7O76096 145 aa2.06□□□□□ -2.08
TRAPPC8-203ENST00000577474 MGST1P10620 155 aaKnown RBP2.06□□□□□ -2.08
TRAPPC8-203ENST00000577474 RHOGP84095 191 aa2.06□□□□□ -2.08
TRAPPC8-203ENST00000577474 ZNF714Q96N38 554 aa2.06□□□□□ -2.08
TRAPPC8-203ENST00000577474 TCEAL2Q9H3H9 227 aaPredicted RBP2.06□□□□□ -2.08
TRAPPC8-203ENST00000577474 LY96Q9Y6Y9 160 aa2.06□□□□□ -2.08
TRAPPC8-203ENST00000577474 HIVEP2P31629 2446 aa2.06□□□□□ -2.08
TRAPPC8-203ENST00000577474 TRAV14DV4A0A0A6YYC5 116 aa2.05□□□□□ -2.08
TRAPPC8-203ENST00000577474 PRORSD1PA6NEY8 169 aa2.05□□□□□ -2.08
TRAPPC8-203ENST00000577474 ZNF705BP0CI00 300 aaPredicted RBP2.05□□□□□ -2.08
TRAPPC8-203ENST00000577474 BCL2P10415 239 aa2.05□□□□□ -2.08
TRAPPC8-203ENST00000577474 INSL3P51460 131 aa2.05□□□□□ -2.08
TRAPPC8-203ENST00000577474 PHF5AQ7RTV0 110 aaKnown RBP2.05□□□□□ -2.08
TRAPPC8-203ENST00000577474 PRR15Q8IV56 129 aa2.05□□□□□ -2.08
TRAPPC8-203ENST00000577474 LINC00311Q8N616 119 aa2.05□□□□□ -2.08
TRAPPC8-203ENST00000577474 C3orf56Q8N813 242 aa2.05□□□□□ -2.08
TRAPPC8-203ENST00000577474 LINC00301Q8NCQ3 95 aa2.05□□□□□ -2.08
TRAPPC8-203ENST00000577474 OR5D16Q8NGK9 328 aa2.05□□□□□ -2.08
TRAPPC8-203ENST00000577474 C4orf3Q8WVX3 66 aa2.05□□□□□ -2.08
TRAPPC8-203ENST00000577474 OR2H1Q9GZK4 316 aa2.05□□□□□ -2.08
TRAPPC8-203ENST00000577474 GINS2Q9Y248 185 aa2.05□□□□□ -2.08
TRAPPC8-203ENST00000577474 ECM29Q5VYK3 1845 aa2.05□□□□□ -2.08
TRAPPC8-203ENST00000577474 NCKAP5O14513 1909 aa2.05□□□□□ -2.08
TRAPPC8-203ENST00000577474 TRGV2A0A075B6R0 118 aa2.04□□□□□ -2.08
TRAPPC8-203ENST00000577474 TRAV1-1A0A0B4J248 108 aa2.04□□□□□ -2.08
TRAPPC8-203ENST00000577474 RIMBP3CA6NJZ7 1639 aa2.04□□□□□ -2.08
TRAPPC8-203ENST00000577474 PCNX2A6NKB5 2137 aa2.04□□□□□ -2.08
TRAPPC8-203ENST00000577474 RIMBP3BA6NNM3 1639 aa2.04□□□□□ -2.08
TRAPPC8-203ENST00000577474 HIST1H2BKO60814 126 aa2.04□□□□□ -2.08
TRAPPC8-203ENST00000577474 GADD45GO95257 159 aa2.04□□□□□ -2.08
TRAPPC8-203ENST00000577474 HIST1H2BJP06899 126 aa2.04□□□□□ -2.08
TRAPPC8-203ENST00000577474 OR10J4P0C629 311 aa2.04□□□□□ -2.08
TRAPPC8-203ENST00000577474 SOSTDC1Q6X4U4 206 aa2.04□□□□□ -2.08
TRAPPC8-203ENST00000577474 FP248Q71RG6 208 aaPredicted RBP2.04□□□□□ -2.08
TRAPPC8-203ENST00000577474 CPAMD8Q8IZJ3 1885 aa2.04□□□□□ -2.08
TRAPPC8-203ENST00000577474 C12orf29Q8N999 325 aa2.04□□□□□ -2.08
TRAPPC8-203ENST00000577474 GRPEL2Q8TAA5 225 aa2.04□□□□□ -2.08
TRAPPC8-203ENST00000577474 THEM6Q8WUY1 208 aa2.04□□□□□ -2.08
TRAPPC8-203ENST00000577474 BORCS8Q96FH0 119 aa2.04□□□□□ -2.08
TRAPPC8-203ENST00000577474 CACYBPQ9HB71 228 aaKnown RBP2.04□□□□□ -2.08
TRAPPC8-203ENST00000577474 BATF3Q9NR55 127 aa2.04□□□□□ -2.08
TRAPPC8-203ENST00000577474 RIMBP3Q9UFD9 1639 aa2.04□□□□□ -2.08
TRAPPC8-203ENST00000577474 BRWD1Q9NSI6 2320 aa2.03□□□□□ -2.08
TRAPPC8-203ENST00000577474 RP1P56715 2156 aa2.03□□□□□ -2.08
TRAPPC8-203ENST00000577474 SETD5Q9C0A6 1442 aa2.03□□□□□ -2.08
TRAPPC8-203ENST00000577474 TRDV1A0A1B0GX56 115 aa2.03□□□□□ -2.08
TRAPPC8-203ENST00000577474 ARL5CA6NH57 179 aa2.03□□□□□ -2.08
TRAPPC8-203ENST00000577474 C17orf112F2Z3M2 114 aa2.03□□□□□ -2.08
TRAPPC8-203ENST00000577474 OR1I1O60431 355 aa2.03□□□□□ -2.08
TRAPPC8-203ENST00000577474 BRS3P32247 399 aa2.03□□□□□ -2.08
TRAPPC8-203ENST00000577474 TMBIM6P55061 237 aa2.03□□□□□ -2.08
TRAPPC8-203ENST00000577474 NDUFA6P56556 154 aa2.03□□□□□ -2.08
TRAPPC8-203ENST00000577474 HBBP68871 147 aa2.03□□□□□ -2.08
TRAPPC8-203ENST00000577474 PDE6HQ13956 83 aa2.03□□□□□ -2.08
TRAPPC8-203ENST00000577474 RNASE10Q5GAN6 216 aaKnown RBP2.03□□□□□ -2.08
TRAPPC8-203ENST00000577474 SFT2D1Q8WV19 159 aa2.03□□□□□ -2.08
TRAPPC8-203ENST00000577474 RMND5BQ96G75 393 aaPredicted RBP2.03□□□□□ -2.08
TRAPPC8-203ENST00000577474 AIF1LQ9BQI0 150 aa2.03□□□□□ -2.08
TRAPPC8-203ENST00000577474 LRTM1Q9HBL6 345 aa2.03□□□□□ -2.08
TRAPPC8-203ENST00000577474 SOX21Q9Y651 276 aaPredicted RBP2.03□□□□□ -2.08
TRAPPC8-203ENST00000577474 TRAV12-1A0A0B4J245 112 aa2.02□□□□□ -2.09
TRAPPC8-203ENST00000577474 DHFRP00374 187 aa2.02□□□□□ -2.09
TRAPPC8-203ENST00000577474 SCGB1A1P11684 91 aa2.02□□□□□ -2.09
TRAPPC8-203ENST00000577474 RPL35P42766 123 aaKnown RBP2.02□□□□□ -2.09
TRAPPC8-203ENST00000577474 SSR2P43308 183 aa2.02□□□□□ -2.09
TRAPPC8-203ENST00000577474 EIF3IQ13347 325 aaKnown RBP2.02□□□□□ -2.09
TRAPPC8-203ENST00000577474 SURF2Q15527 256 aaPredicted RBP2.02□□□□□ -2.09
TRAPPC8-203ENST00000577474 ALX1Q15699 326 aa2.02□□□□□ -2.09
TRAPPC8-203ENST00000577474 KRTAP13-4Q3LI77 160 aa2.02□□□□□ -2.09
TRAPPC8-203ENST00000577474 TMEM35BQ8NCS4 154 aa2.02□□□□□ -2.09
TRAPPC8-203ENST00000577474 OR2T35Q8NGX2 323 aa2.02□□□□□ -2.09
TRAPPC8-203ENST00000577474 Q96M85 177 aa2.02□□□□□ -2.09
TRAPPC8-203ENST00000577474 MCEEQ96PE7 176 aa2.02□□□□□ -2.09
TRAPPC8-203ENST00000577474 MED9Q9NWA0 146 aa2.02□□□□□ -2.09
TRAPPC8-203ENST00000577474 PLXNA3P51805 1871 aa2.02□□□□□ -2.09
TRAPPC8-203ENST00000577474 COL5A1P20908 1838 aaPredicted RBP2.02□□□□□ -2.09
TRAPPC8-203ENST00000577474 CD109Q6YHK3 1445 aa2.01□□□□□ -2.09
TRAPPC8-203ENST00000577474 TRBV6-5A0A0K0K1A5 114 aa2.01□□□□□ -2.09
TRAPPC8-203ENST00000577474 OVOL1O14753 267 aa2.01□□□□□ -2.09
TRAPPC8-203ENST00000577474 ARPP19P56211 112 aa2.01□□□□□ -2.09
TRAPPC8-203ENST00000577474 RAB4BP61018 213 aa2.01□□□□□ -2.09
TRAPPC8-203ENST00000577474 RPS28P62857 69 aaKnown RBP2.01□□□□□ -2.09
TRAPPC8-203ENST00000577474 KRTAP6-3Q3LI67 103 aa2.01□□□□□ -2.09
TRAPPC8-203ENST00000577474 PCOTHQ58A44 107 aa2.01□□□□□ -2.09
TRAPPC8-203ENST00000577474 Q6ZRN7 208 aaPredicted RBP2.01□□□□□ -2.09
TRAPPC8-203ENST00000577474 OR4K15Q8NH41 348 aa2.01□□□□□ -2.09
TRAPPC8-203ENST00000577474 TMEM254Q8TBM7 123 aa2.01□□□□□ -2.09
TRAPPC8-203ENST00000577474 ZNF418Q8TF45 676 aaPredicted RBP2.01□□□□□ -2.09
TRAPPC8-203ENST00000577474 NAA38Q9BRA0 125 aaKnown RBP2.01□□□□□ -2.09
TRAPPC8-203ENST00000577474 RASL12Q9NYN1 266 aa2.01□□□□□ -2.09
TRAPPC8-203ENST00000577474 NAT8BQ9UHF3 227 aa2.01□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms