RNA–Protein interactions for RNA: ENST00000576708.5

NUP88-212, Transcript of nucleoporin 88, humanhuman

TSL 5

Gene NUP88, Length 800 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-212ENST00000576708 RNASE10Q5GAN6 216 aaKnown RBP4.52□□□□□ -1.69
NUP88-212ENST00000576708 FAAP20Q6NZ36 180 aa4.52□□□□□ -1.69
NUP88-212ENST00000576708 LHFPL1Q86WI0 220 aa4.52□□□□□ -1.69
NUP88-212ENST00000576708 TMEM217Q8N7C4 229 aa4.52□□□□□ -1.69
NUP88-212ENST00000576708 SLC35G3Q8N808 338 aa4.52□□□□□ -1.69
NUP88-212ENST00000576708 DUSP18Q8NEJ0 188 aa4.52□□□□□ -1.69
NUP88-212ENST00000576708 C2CD4CQ8TF44 421 aa4.52□□□□□ -1.69
NUP88-212ENST00000576708 GINS3Q9BRX5 216 aa4.52□□□□□ -1.69
NUP88-212ENST00000576708 ALKBH7Q9BT30 221 aaPredicted RBP4.52□□□□□ -1.69
NUP88-212ENST00000576708 VCX3AQ9NNX9 186 aa4.52□□□□□ -1.69
NUP88-212ENST00000576708 CLEC5AQ9NY25 188 aa4.52□□□□□ -1.69
NUP88-212ENST00000576708 RABAC1Q9UI14 185 aa4.52□□□□□ -1.69
NUP88-212ENST00000576708 A0A1W2PPV4 95 aa4.51□□□□□ -1.69
NUP88-212ENST00000576708 K7EQG2 157 aa4.51□□□□□ -1.69
NUP88-212ENST00000576708 TNFAIP8O95379 198 aa4.51□□□□□ -1.69
NUP88-212ENST00000576708 RAB3DO95716 219 aa4.51□□□□□ -1.69
NUP88-212ENST00000576708 ZNF688P0C7X2 276 aa4.51□□□□□ -1.69
NUP88-212ENST00000576708 RBMY1A1P0DJD3 496 aaKnown RBP4.51□□□□□ -1.69
NUP88-212ENST00000576708 RBMY1CP0DJD4 496 aa4.51□□□□□ -1.69
NUP88-212ENST00000576708 C4BPBP20851 252 aa4.51□□□□□ -1.69
NUP88-212ENST00000576708 NPPCP23582 126 aa4.51□□□□□ -1.69
NUP88-212ENST00000576708 HOXA1P49639 335 aaPredicted RBP4.51□□□□□ -1.69
NUP88-212ENST00000576708 RORCP51449 518 aa4.51□□□□□ -1.69
NUP88-212ENST00000576708 TMEM187Q14656 261 aa4.51□□□□□ -1.69
NUP88-212ENST00000576708 MEF2DQ14814 521 aa4.51□□□□□ -1.69
NUP88-212ENST00000576708 RBMY1FQ15415 496 aaKnown RBP4.51□□□□□ -1.69
NUP88-212ENST00000576708 SCGB2B2Q4G0G5 96 aa4.51□□□□□ -1.69
NUP88-212ENST00000576708 LGALS9CQ6DKI2 356 aa4.51□□□□□ -1.69
NUP88-212ENST00000576708 PVRIGQ6DKI7 326 aa4.51□□□□□ -1.69
NUP88-212ENST00000576708 GSG1LQ6UXU4 331 aa4.51□□□□□ -1.69
NUP88-212ENST00000576708 CLVS1Q8IUQ0 354 aaPredicted RBP4.51□□□□□ -1.69
NUP88-212ENST00000576708 STXBP6Q8NFX7 210 aa4.51□□□□□ -1.69
NUP88-212ENST00000576708 OR13C8Q8NGS7 320 aa4.51□□□□□ -1.69
NUP88-212ENST00000576708 LHFPL5Q8TAF8 219 aa4.51□□□□□ -1.69
NUP88-212ENST00000576708 LRRC20Q8TCA0 184 aa4.51□□□□□ -1.69
NUP88-212ENST00000576708 MARCH1Q8TCQ1 289 aa4.51□□□□□ -1.69
NUP88-212ENST00000576708 GLYATL2Q8WU03 294 aa4.51□□□□□ -1.69
NUP88-212ENST00000576708 GATAD1Q8WUU5 269 aa4.51□□□□□ -1.69
NUP88-212ENST00000576708 RPL36ALQ969Q0 106 aaKnown RBP4.51□□□□□ -1.69
NUP88-212ENST00000576708 TMEM230Q96A57 120 aa4.51□□□□□ -1.69
NUP88-212ENST00000576708 MIXL1Q9H2W2 232 aa4.51□□□□□ -1.69
NUP88-212ENST00000576708 MTFP1Q9UDX5 166 aa4.51□□□□□ -1.69
NUP88-212ENST00000576708 IGHV4-28A0A0C4DH34 117 aa4.5□□□□□ -1.69
NUP88-212ENST00000576708 C5orf52A6NGY3 159 aa4.5□□□□□ -1.69
NUP88-212ENST00000576708 IGLL5B9A064 214 aa4.5□□□□□ -1.69
NUP88-212ENST00000576708 INS-IGF2F8WCM5 200 aa4.5□□□□□ -1.69
NUP88-212ENST00000576708 IGKV1-17P01599 117 aa4.5□□□□□ -1.69
NUP88-212ENST00000576708 MBP02144 154 aa4.5□□□□□ -1.69
NUP88-212ENST00000576708 IFNA4P05014 189 aa4.5□□□□□ -1.69
NUP88-212ENST00000576708 FABP1P07148 127 aa4.5□□□□□ -1.69
NUP88-212ENST00000576708 OR5AC1P0C628 307 aa4.5□□□□□ -1.69
NUP88-212ENST00000576708 SMIM18P0DKX4 95 aa4.5□□□□□ -1.69
NUP88-212ENST00000576708 RAB4AP20338 218 aa4.5□□□□□ -1.69
NUP88-212ENST00000576708 CRYBB3P26998 211 aa4.5□□□□□ -1.69
NUP88-212ENST00000576708 OPRK1P41145 380 aa4.5□□□□□ -1.69
NUP88-212ENST00000576708 P2RY1P47900 373 aa4.5□□□□□ -1.69
NUP88-212ENST00000576708 CDC34P49427 236 aaPredicted RBP4.5□□□□□ -1.69
NUP88-212ENST00000576708 BCAP31P51572 246 aa4.5□□□□□ -1.69
NUP88-212ENST00000576708 CTF1Q16619 201 aa4.5□□□□□ -1.69
NUP88-212ENST00000576708 ACTL10Q5JWF8 245 aa4.5□□□□□ -1.69
NUP88-212ENST00000576708 C10orf25Q5T742 122 aa4.5□□□□□ -1.69
NUP88-212ENST00000576708 GPR107Q5VW38 600 aa4.5□□□□□ -1.69
NUP88-212ENST00000576708 ZNF767PQ75MW2 155 aa4.5□□□□□ -1.69
NUP88-212ENST00000576708 TRPT1Q86TN4 253 aaKnown RBP4.5□□□□□ -1.69
NUP88-212ENST00000576708 STHQ8IWL8 128 aa4.5□□□□□ -1.69
NUP88-212ENST00000576708 Q8NAQ8 132 aa4.5□□□□□ -1.69
NUP88-212ENST00000576708 TMEM229BQ8NBD8 167 aa4.5□□□□□ -1.69
NUP88-212ENST00000576708 TERB2Q8NHR7 220 aa4.5□□□□□ -1.69
NUP88-212ENST00000576708 RNASE11Q8TAA1 199 aaKnown RBP4.5□□□□□ -1.69
NUP88-212ENST00000576708 TMEM170AQ8WVE7 144 aa4.5□□□□□ -1.69
NUP88-212ENST00000576708 GPR146Q96CH1 333 aa4.5□□□□□ -1.69
NUP88-212ENST00000576708 RRNAD1Q96FB5 475 aaKnown RBP4.5□□□□□ -1.69
NUP88-212ENST00000576708 ZNF486Q96H40 463 aaPredicted RBP4.5□□□□□ -1.69
NUP88-212ENST00000576708 METTL26Q96S19 204 aa4.5□□□□□ -1.69
NUP88-212ENST00000576708 RTBDNQ9BSG5 229 aaPredicted RBP4.5□□□□□ -1.69
NUP88-212ENST00000576708 PDCD10Q9BUL8 212 aa4.5□□□□□ -1.69
NUP88-212ENST00000576708 C11orf68Q9H3H3 251 aaKnown RBP4.5□□□□□ -1.69
NUP88-212ENST00000576708 ENY2Q9NPA8 101 aa4.5□□□□□ -1.69
NUP88-212ENST00000576708 BATF3Q9NR55 127 aa4.5□□□□□ -1.69
NUP88-212ENST00000576708 COPZ2Q9P299 210 aa4.5□□□□□ -1.69
NUP88-212ENST00000576708 NAGKQ9UJ70 344 aa4.5□□□□□ -1.69
NUP88-212ENST00000576708 APLNQ9ULZ1 77 aa4.5□□□□□ -1.69
NUP88-212ENST00000576708 TRAV2A0A0B4J234 112 aa4.49□□□□□ -1.69
NUP88-212ENST00000576708 RHODO00212 210 aa4.49□□□□□ -1.69
NUP88-212ENST00000576708 CORTO00230 105 aa4.49□□□□□ -1.69
NUP88-212ENST00000576708 PAGE4O60829 102 aa4.49□□□□□ -1.69
NUP88-212ENST00000576708 CD74P04233 296 aa4.49□□□□□ -1.69
NUP88-212ENST00000576708 ZNF182P17025 639 aaPredicted RBP4.49□□□□□ -1.69
NUP88-212ENST00000576708 HLA-DMBP28068 263 aa4.49□□□□□ -1.69
NUP88-212ENST00000576708 RND2P52198 227 aa4.49□□□□□ -1.69
NUP88-212ENST00000576708 SUB1P53999 127 aaKnown RBP eCLIP4.49□□□□□ -1.69
NUP88-212ENST00000576708 DEFB1P60022 68 aa4.49□□□□□ -1.69
NUP88-212ENST00000576708 SPCS3P61009 180 aa4.49□□□□□ -1.69
NUP88-212ENST00000576708 RAB4BP61018 213 aa4.49□□□□□ -1.69
NUP88-212ENST00000576708 DHODHQ02127 395 aa4.49□□□□□ -1.69
NUP88-212ENST00000576708 BSXQ3C1V8 233 aa4.49□□□□□ -1.69
NUP88-212ENST00000576708 TMEM41BQ5BJD5 291 aa4.49□□□□□ -1.69
NUP88-212ENST00000576708 PXDC1Q5TGL8 231 aa4.49□□□□□ -1.69
NUP88-212ENST00000576708 STEAP1BQ6NZ63 245 aa4.49□□□□□ -1.69
NUP88-212ENST00000576708 PRSS54Q6PEW0 395 aa4.49□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 118 ms