RNA–Protein interactions for RNA: ENST00000576012.5

SCARF1-209, Transcript of scavenger receptor class F member 1, humanhuman

TSL 2

Gene SCARF1, Length 3,292 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-209ENST00000576012 DHRS13Q6UX07 377 aa11.73□□□□□ -0.53
SCARF1-209ENST00000576012 ZCCHC24Q8N2G6 241 aaKnown RBP11.73□□□□□ -0.53
SCARF1-209ENST00000576012 PPP1R35Q8TAP8 253 aa11.73□□□□□ -0.53
SCARF1-209ENST00000576012 MED13LQ71F56 2210 aa11.73□□□□□ -0.53
SCARF1-209ENST00000576012 B9A039 149 aa11.73□□□□□ -0.53
SCARF1-209ENST00000576012 EXOC3-AS1Q8N2X6 119 aa11.73□□□□□ -0.53
SCARF1-209ENST00000576012 ENSAO43768 121 aaKnown RBP11.73□□□□□ -0.53
SCARF1-209ENST00000576012 ERHP84090 104 aaKnown RBP11.73□□□□□ -0.53
SCARF1-209ENST00000576012 LOXL1Q08397 574 aaPredicted RBP11.73□□□□□ -0.53
SCARF1-209ENST00000576012 TMEM97Q5BJF2 176 aa11.73□□□□□ -0.53
SCARF1-209ENST00000576012 PRR7Q8TB68 274 aa11.73□□□□□ -0.53
SCARF1-209ENST00000576012 A8MWL6 223 aa11.72□□□□□ -0.53
SCARF1-209ENST00000576012 KLRC4-KLRK1H3BQV0 150 aa11.72□□□□□ -0.53
SCARF1-209ENST00000576012 CD5LO43866 347 aa11.72□□□□□ -0.53
SCARF1-209ENST00000576012 DLX1P56177 255 aa11.72□□□□□ -0.53
SCARF1-209ENST00000576012 SCGB2A2Q13296 93 aa11.72□□□□□ -0.53
SCARF1-209ENST00000576012 FXYD5Q96DB9 178 aa11.72□□□□□ -0.53
SCARF1-209ENST00000576012 MRPL20Q9BYC9 149 aaKnown RBP11.72□□□□□ -0.53
SCARF1-209ENST00000576012 DSCAMO60469 2012 aa11.72□□□□□ -0.53
SCARF1-209ENST00000576012 FAM90A9PA6NNJ1 464 aa11.72□□□□□ -0.53
SCARF1-209ENST00000576012 HIST1H1AQ02539 215 aaPredicted RBP11.72□□□□□ -0.53
SCARF1-209ENST00000576012 TTTY13Q9BZ97 58 aa11.72□□□□□ -0.53
SCARF1-209ENST00000576012 TNRC6BQ9UPQ9 1833 aaKnown RBP11.72□□□□□ -0.53
SCARF1-209ENST00000576012 OR2J3O76001 311 aa11.71□□□□□ -0.53
SCARF1-209ENST00000576012 LIPFP07098 398 aa11.71□□□□□ -0.53
SCARF1-209ENST00000576012 NBEAP1P0C6P0 100 aa11.71□□□□□ -0.53
SCARF1-209ENST00000576012 IGLC1P0CG04 106 aa11.71□□□□□ -0.53
SCARF1-209ENST00000576012 SHISA2Q6UWI4 295 aa11.71□□□□□ -0.53
SCARF1-209ENST00000576012 GOLT1AQ6ZVE7 132 aa11.71□□□□□ -0.53
SCARF1-209ENST00000576012 WIPF2Q8TF74 440 aaPredicted RBP11.71□□□□□ -0.53
SCARF1-209ENST00000576012 SRSF12Q8WXF0 261 aaKnown RBP11.71□□□□□ -0.53
SCARF1-209ENST00000576012 GPR82Q96P67 336 aa11.71□□□□□ -0.53
SCARF1-209ENST00000576012 RABAC1Q9UI14 185 aa11.71□□□□□ -0.53
SCARF1-209ENST00000576012 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP11.71□□□□□ -0.53
SCARF1-209ENST00000576012 C9orf172C9J069 976 aa11.71□□□□□ -0.53
SCARF1-209ENST00000576012 PTPRBP23467 1997 aa11.71□□□□□ -0.53
SCARF1-209ENST00000576012 M0R1B8 84 aa11.71□□□□□ -0.54
SCARF1-209ENST00000576012 ARMS2P0C7Q2 107 aa11.71□□□□□ -0.54
SCARF1-209ENST00000576012 CCL3L1P16619 93 aa11.71□□□□□ -0.54
SCARF1-209ENST00000576012 WT1-ASQ06250 92 aa11.71□□□□□ -0.54
SCARF1-209ENST00000576012 C2orf91Q6ZV80 131 aa11.71□□□□□ -0.54
SCARF1-209ENST00000576012 FA2HQ7L5A8 372 aa11.71□□□□□ -0.54
SCARF1-209ENST00000576012 SPTAN1Q13813 2472 aaKnown RBP11.71□□□□□ -0.54
SCARF1-209ENST00000576012 A0A1B0GXF2 115 aa11.7□□□□□ -0.54
SCARF1-209ENST00000576012 CFHR2P36980 270 aa11.7□□□□□ -0.54
SCARF1-209ENST00000576012 MEF2CQ06413 473 aaPredicted RBP11.7□□□□□ -0.54
SCARF1-209ENST00000576012 FAM71F2Q6NXP2 309 aa11.7□□□□□ -0.54
SCARF1-209ENST00000576012 PERPQ96FX8 193 aa11.7□□□□□ -0.54
SCARF1-209ENST00000576012 TPSG1Q9NRR2 321 aa11.7□□□□□ -0.54
SCARF1-209ENST00000576012 AP5S1Q9NUS5 200 aa11.7□□□□□ -0.54
SCARF1-209ENST00000576012 KBTBD11-OT1A0A1B0GTJ5 212 aa11.7□□□□□ -0.54
SCARF1-209ENST00000576012 MC5RP33032 325 aa11.7□□□□□ -0.54
SCARF1-209ENST00000576012 KIR2DS2P43631 304 aa11.7□□□□□ -0.54
SCARF1-209ENST00000576012 MTURNQ8N3F0 131 aa11.7□□□□□ -0.54
SCARF1-209ENST00000576012 OR4A5Q8NH83 315 aa11.7□□□□□ -0.54
SCARF1-209ENST00000576012 C18orf15Q96N68 181 aa11.7□□□□□ -0.54
SCARF1-209ENST00000576012 SSUH2Q9Y2M2 353 aa11.7□□□□□ -0.54
SCARF1-209ENST00000576012 SRRM5B3KS81 715 aa11.7□□□□□ -0.54
SCARF1-209ENST00000576012 H1FXQ92522 213 aaKnown RBP11.7□□□□□ -0.54
SCARF1-209ENST00000576012 GTSF1LQ9H1H1 148 aa11.7□□□□□ -0.54
SCARF1-209ENST00000576012 CEP295Q9C0D2 2601 aa11.69□□□□□ -0.54
SCARF1-209ENST00000576012 IFI27P40305 119 aaPredicted RBP11.69□□□□□ -0.54
SCARF1-209ENST00000576012 KIR3DS1Q14943 382 aa11.69□□□□□ -0.54
SCARF1-209ENST00000576012 INO80CQ6PI98 192 aaPredicted RBP11.69□□□□□ -0.54
SCARF1-209ENST00000576012 C5orf17Q8NAS9 161 aa11.69□□□□□ -0.54
SCARF1-209ENST00000576012 CACNG7P62955 275 aa11.69□□□□□ -0.54
SCARF1-209ENST00000576012 SRSF6Q13247 344 aaKnown RBP11.69□□□□□ -0.54
SCARF1-209ENST00000576012 ZNF48Q96MX3 618 aaPredicted RBP11.69□□□□□ -0.54
SCARF1-209ENST00000576012 HSPB8Q9UJY1 196 aa11.69□□□□□ -0.54
SCARF1-209ENST00000576012 F2RL2O00254 374 aa11.68□□□□□ -0.54
SCARF1-209ENST00000576012 DLL1O00548 723 aa11.68□□□□□ -0.54
SCARF1-209ENST00000576012 LYZP61626 148 aa11.68□□□□□ -0.54
SCARF1-209ENST00000576012 RBPMS2Q6ZRY4 209 aaKnown RBP11.68□□□□□ -0.54
SCARF1-209ENST00000576012 FAM231DQ6ZW35 169 aa11.68□□□□□ -0.54
SCARF1-209ENST00000576012 PCP2Q8IVA1 136 aa11.68□□□□□ -0.54
SCARF1-209ENST00000576012 OR10AG1Q8NH19 301 aa11.68□□□□□ -0.54
SCARF1-209ENST00000576012 Q9H3A6 140 aa11.68□□□□□ -0.54
SCARF1-209ENST00000576012 A0A0G2JLM5 398 aa11.68□□□□□ -0.54
SCARF1-209ENST00000576012 C2orf83Q53S99 150 aa11.68□□□□□ -0.54
SCARF1-209ENST00000576012 STXBP6Q8NFX7 210 aa11.68□□□□□ -0.54
SCARF1-209ENST00000576012 SMIM12Q96EX1 92 aa11.68□□□□□ -0.54
SCARF1-209ENST00000576012 S4R3C0 116 aa11.68□□□□□ -0.54
SCARF1-209ENST00000576012 IGHV1-18A0A0C4DH31 117 aa11.68□□□□□ -0.54
SCARF1-209ENST00000576012 SMKR1H3BMG3 65 aa11.68□□□□□ -0.54
SCARF1-209ENST00000576012 APOBEC3AP31941 199 aaPredicted RBP11.68□□□□□ -0.54
SCARF1-209ENST00000576012 SMAGPQ0VAQ4 97 aa11.68□□□□□ -0.54
SCARF1-209ENST00000576012 RASL11AQ6T310 242 aa11.68□□□□□ -0.54
SCARF1-209ENST00000576012 MRPL32Q9BYC8 188 aaKnown RBP11.68□□□□□ -0.54
SCARF1-209ENST00000576012 PSMB11A5LHX3 300 aa11.67□□□□□ -0.54
SCARF1-209ENST00000576012 PLP1P60201 277 aa11.67□□□□□ -0.54
SCARF1-209ENST00000576012 Q6ZT83 130 aa11.67□□□□□ -0.54
SCARF1-209ENST00000576012 GTF2H5Q6ZYL4 71 aa11.67□□□□□ -0.54
SCARF1-209ENST00000576012 C9orf106Q8NAJ2 232 aa11.67□□□□□ -0.54
SCARF1-209ENST00000576012 OR2K2Q8NGT1 345 aa11.67□□□□□ -0.54
SCARF1-209ENST00000576012 NEU4Q8WWR8 484 aaPredicted RBP11.67□□□□□ -0.54
SCARF1-209ENST00000576012 CHCHD1Q96BP2 118 aaKnown RBP11.67□□□□□ -0.54
SCARF1-209ENST00000576012 RITA1Q96K30 269 aa11.67□□□□□ -0.54
SCARF1-209ENST00000576012 SPCS1Q9Y6A9 102 aa11.67□□□□□ -0.54
SCARF1-209ENST00000576012 COX8AP10176 69 aa11.67□□□□□ -0.54
SCARF1-209ENST00000576012 CCL8P80075 99 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms