RNA–Protein interactions for RNA: ENST00000575333.5

TOM1L1-220, Transcript of target of myb1 like 1 membrane trafficking protein, humanhuman

TSL 1 (best) BASIC

Gene TOM1L1, Length 1,849 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1L1-220ENST00000575333 FOXA3P55318 350 aaPredicted RBP6.43□□□□□ -1.38
TOM1L1-220ENST00000575333 ANKRD29Q8N6D5 301 aa6.43□□□□□ -1.38
TOM1L1-220ENST00000575333 WDR31Q8NA23 367 aa6.43□□□□□ -1.38
TOM1L1-220ENST00000575333 GATD1Q8NB37 220 aa6.43□□□□□ -1.38
TOM1L1-220ENST00000575333 EDA2RQ9HAV5 297 aa6.43□□□□□ -1.38
TOM1L1-220ENST00000575333 LSM7Q9UK45 103 aaKnown RBP6.43□□□□□ -1.38
TOM1L1-220ENST00000575333 CHCHD2Q9Y6H1 151 aaPredicted RBP6.43□□□□□ -1.38
TOM1L1-220ENST00000575333 SHANK1Q9Y566 2161 aa6.43□□□□□ -1.38
TOM1L1-220ENST00000575333 MYMXA0A1B0GTQ4 84 aa6.43□□□□□ -1.38
TOM1L1-220ENST00000575333 WISP2O76076 250 aa6.43□□□□□ -1.38
TOM1L1-220ENST00000575333 NPYP01303 97 aa6.43□□□□□ -1.38
TOM1L1-220ENST00000575333 APOHP02749 345 aaPredicted RBP6.43□□□□□ -1.38
TOM1L1-220ENST00000575333 STATHP02808 62 aa6.43□□□□□ -1.38
TOM1L1-220ENST00000575333 CNTFRP26992 372 aa6.43□□□□□ -1.38
TOM1L1-220ENST00000575333 TMEM258P61165 79 aa6.43□□□□□ -1.38
TOM1L1-220ENST00000575333 PPP1CAP62136 330 aa6.43□□□□□ -1.38
TOM1L1-220ENST00000575333 GNG5P63218 68 aa6.43□□□□□ -1.38
TOM1L1-220ENST00000575333 COL9A2Q14055 689 aaPredicted RBP6.43□□□□□ -1.38
TOM1L1-220ENST00000575333 TEX36Q5VZQ5 186 aa6.43□□□□□ -1.38
TOM1L1-220ENST00000575333 VN1R4Q7Z5H5 301 aa6.43□□□□□ -1.38
TOM1L1-220ENST00000575333 OR8A1Q8NGG7 326 aa6.43□□□□□ -1.38
TOM1L1-220ENST00000575333 PRSS3P2Q8NHM4 247 aa6.43□□□□□ -1.38
TOM1L1-220ENST00000575333 PLEKHA3Q9HB20 300 aa6.43□□□□□ -1.38
TOM1L1-220ENST00000575333 PRNDQ9UKY0 176 aa6.43□□□□□ -1.38
TOM1L1-220ENST00000575333 V9GYY9 64 aa6.43□□□□□ -1.38
TOM1L1-220ENST00000575333 EXPH5Q8NEV8 1989 aa6.42□□□□□ -1.38
TOM1L1-220ENST00000575333 MYO7AQ13402 2215 aa6.42□□□□□ -1.38
TOM1L1-220ENST00000575333 TRAV8-4A0A0B4J246 113 aa6.42□□□□□ -1.38
TOM1L1-220ENST00000575333 MBD3L4A6NDZ8 208 aaPredicted RBP6.42□□□□□ -1.38
TOM1L1-220ENST00000575333 MBD3L3A6NE82 208 aaPredicted RBP6.42□□□□□ -1.38
TOM1L1-220ENST00000575333 MBD3L5A6NJ08 208 aaPredicted RBP6.42□□□□□ -1.38
TOM1L1-220ENST00000575333 HBDP02042 147 aa6.42□□□□□ -1.38
TOM1L1-220ENST00000575333 P0C879 139 aa6.42□□□□□ -1.38
TOM1L1-220ENST00000575333 DEFA4P12838 97 aa6.42□□□□□ -1.38
TOM1L1-220ENST00000575333 RPL13AP40429 203 aaKnown RBP6.42□□□□□ -1.38
TOM1L1-220ENST00000575333 HSPE1P61604 102 aaKnown RBP6.42□□□□□ -1.38
TOM1L1-220ENST00000575333 RSPO4Q2I0M5 234 aaPredicted RBP6.42□□□□□ -1.38
TOM1L1-220ENST00000575333 TMEM196Q5HYL7 178 aa6.42□□□□□ -1.38
TOM1L1-220ENST00000575333 Q6ZR03 302 aa6.42□□□□□ -1.38
TOM1L1-220ENST00000575333 C15orf53Q8NAA6 179 aa6.42□□□□□ -1.38
TOM1L1-220ENST00000575333 TMEM52Q8NDY8 209 aa6.42□□□□□ -1.38
TOM1L1-220ENST00000575333 IFI27L1Q96BM0 104 aa6.42□□□□□ -1.38
TOM1L1-220ENST00000575333 BORCS8Q96FH0 119 aa6.42□□□□□ -1.38
TOM1L1-220ENST00000575333 PSMG3-AS1Q96PY0 264 aa6.42□□□□□ -1.38
TOM1L1-220ENST00000575333 RPP21Q9H633 154 aaKnown RBP6.42□□□□□ -1.38
TOM1L1-220ENST00000575333 ZMAT4Q9H898 229 aa6.42□□□□□ -1.38
TOM1L1-220ENST00000575333 ZNF492Q9P255 531 aa6.42□□□□□ -1.38
TOM1L1-220ENST00000575333 HCFC1P51610 2035 aa6.42□□□□□ -1.38
TOM1L1-220ENST00000575333 SPTBN5Q9NRC6 3674 aaKnown RBP6.42□□□□□ -1.38
TOM1L1-220ENST00000575333 TRAV2A0A0B4J234 112 aa6.41□□□□□ -1.38
TOM1L1-220ENST00000575333 TINCRA0A1B0GVN0 87 aa6.41□□□□□ -1.38
TOM1L1-220ENST00000575333 ATP5LO75964 103 aa6.41□□□□□ -1.38
TOM1L1-220ENST00000575333 CRYGAP11844 174 aa6.41□□□□□ -1.38
TOM1L1-220ENST00000575333 B4GALT1P15291 398 aa6.41□□□□□ -1.38
TOM1L1-220ENST00000575333 PSMB2P49721 201 aa6.41□□□□□ -1.38
TOM1L1-220ENST00000575333 DEFB134Q4QY38 66 aa6.41□□□□□ -1.38
TOM1L1-220ENST00000575333 DUX4L9Q6RFH8 374 aaPredicted RBP6.41□□□□□ -1.38
TOM1L1-220ENST00000575333 PCSK4Q6UW60 755 aa6.41□□□□□ -1.38
TOM1L1-220ENST00000575333 Q6ZPA2 131 aa6.41□□□□□ -1.38
TOM1L1-220ENST00000575333 FOXL2NBQ6ZUU3 175 aa6.41□□□□□ -1.38
TOM1L1-220ENST00000575333 ABHD12Q8N2K0 398 aa6.41□□□□□ -1.38
TOM1L1-220ENST00000575333 FGFRL1Q8N441 504 aa6.41□□□□□ -1.38
TOM1L1-220ENST00000575333 FAM57AQ8TBR7 257 aa6.41□□□□□ -1.38
TOM1L1-220ENST00000575333 NPIPB3Q92617 1050 aa6.41□□□□□ -1.38
TOM1L1-220ENST00000575333 MMABQ96EY8 250 aaPredicted RBP6.41□□□□□ -1.38
TOM1L1-220ENST00000575333 HIST1H4GQ99525 98 aa6.41□□□□□ -1.38
TOM1L1-220ENST00000575333 PRORYQ9H606 182 aa6.41□□□□□ -1.38
TOM1L1-220ENST00000575333 PRRC2BQ5JSZ5 2229 aaKnown RBP6.41□□□□□ -1.38
TOM1L1-220ENST00000575333 TRBV7-3A0A075B6L6 115 aa6.41□□□□□ -1.38
TOM1L1-220ENST00000575333 A0A1W2PQD3 144 aa6.41□□□□□ -1.38
TOM1L1-220ENST00000575333 C16orf97H3BN30 126 aa6.41□□□□□ -1.38
TOM1L1-220ENST00000575333 ZG16O60844 167 aa6.41□□□□□ -1.38
TOM1L1-220ENST00000575333 LGALS1P09382 135 aaKnown RBP6.41□□□□□ -1.38
TOM1L1-220ENST00000575333 CD70P32970 193 aa6.41□□□□□ -1.38
TOM1L1-220ENST00000575333 IZUMO4Q1ZYL8 232 aa6.41□□□□□ -1.38
TOM1L1-220ENST00000575333 PIGYQ3MUY2 71 aa6.41□□□□□ -1.38
TOM1L1-220ENST00000575333 GAGE2AQ6NT46 116 aa6.41□□□□□ -1.38
TOM1L1-220ENST00000575333 TRPT1Q86TN4 253 aaKnown RBP6.41□□□□□ -1.38
TOM1L1-220ENST00000575333 LINC00596Q86U02 117 aa6.41□□□□□ -1.38
TOM1L1-220ENST00000575333 IGFBPL1Q8WX77 278 aa6.41□□□□□ -1.38
TOM1L1-220ENST00000575333 FAM168AQ92567 244 aa6.41□□□□□ -1.38
TOM1L1-220ENST00000575333 TIMD4Q96H15 378 aa6.41□□□□□ -1.38
TOM1L1-220ENST00000575333 LYZL4Q96KX0 146 aa6.41□□□□□ -1.38
TOM1L1-220ENST00000575333 MGST2Q99735 147 aa6.41□□□□□ -1.38
TOM1L1-220ENST00000575333 TMED7-TICAM2A0A0A6YYA0 188 aa6.4□□□□□ -1.38
TOM1L1-220ENST00000575333 LTAP01374 205 aa6.4□□□□□ -1.38
TOM1L1-220ENST00000575333 ZNF415Q09FC8 603 aa6.4□□□□□ -1.38
TOM1L1-220ENST00000575333 OR1C1Q15619 314 aa6.4□□□□□ -1.38
TOM1L1-220ENST00000575333 TWIST1Q15672 202 aa6.4□□□□□ -1.38
TOM1L1-220ENST00000575333 COX14Q96I36 57 aa6.4□□□□□ -1.38
TOM1L1-220ENST00000575333 ODF3Q96PU9 254 aa6.4□□□□□ -1.38
TOM1L1-220ENST00000575333 PRRG4Q9BZD6 226 aa6.4□□□□□ -1.38
TOM1L1-220ENST00000575333 EPDR1Q9UM22 224 aa6.4□□□□□ -1.38
TOM1L1-220ENST00000575333 LSM4Q9Y4Z0 139 aaKnown RBP6.4□□□□□ -1.38
TOM1L1-220ENST00000575333 C5orf42Q9H799 3197 aa6.4□□□□□ -1.38
TOM1L1-220ENST00000575333 GOLGA4Q13439 2230 aaKnown RBP6.39□□□□□ -1.39
TOM1L1-220ENST00000575333 TRAV8-1A0A0A6YYK1 113 aa6.39□□□□□ -1.39
TOM1L1-220ENST00000575333 FBXW4P57775 412 aa6.39□□□□□ -1.39
TOM1L1-220ENST00000575333 MIC13Q5XKP0 118 aa6.39□□□□□ -1.39
TOM1L1-220ENST00000575333 ZNF488Q96MN9 340 aa6.39□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms