RNA–Protein interactions for RNA: ENST00000573827.1

SMG6-214, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 601 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-214ENST00000573827 KLK5Q9Y337 293 aaPredicted RBP12.6□□□□□ -0.39
SMG6-214ENST00000573827 HLA-DRB4X5D2U9 266 aa12.6□□□□□ -0.39
SMG6-214ENST00000573827 ELOA3CA0A087WX78 387 aaPredicted RBP12.59□□□□□ -0.39
SMG6-214ENST00000573827 GATA2P23769 480 aaPredicted RBP12.59□□□□□ -0.39
SMG6-214ENST00000573827 SPANXN5Q5MJ07 72 aa12.59□□□□□ -0.39
SMG6-214ENST00000573827 ACOT7LQ6ZUV0 252 aa12.59□□□□□ -0.39
SMG6-214ENST00000573827 C7orf50Q9BRJ6 194 aaKnown RBP12.59□□□□□ -0.39
SMG6-214ENST00000573827 FABP1P07148 127 aa12.58□□□□□ -0.4
SMG6-214ENST00000573827 MIFP14174 115 aa12.58□□□□□ -0.4
SMG6-214ENST00000573827 MFFQ9GZY8 342 aa12.58□□□□□ -0.4
SMG6-214ENST00000573827 PAIP2BQ9ULR5 123 aaKnown RBP12.58□□□□□ -0.4
SMG6-214ENST00000573827 SLC45A2Q9UMX9 530 aa12.58□□□□□ -0.4
SMG6-214ENST00000573827 STRAPQ9Y3F4 350 aaKnown RBP12.58□□□□□ -0.4
SMG6-214ENST00000573827 CCNKO75909 580 aa12.57□□□□□ -0.4
SMG6-214ENST00000573827 LY6G6CO95867 125 aa12.57□□□□□ -0.4
SMG6-214ENST00000573827 PSMB3P49720 205 aa12.57□□□□□ -0.4
SMG6-214ENST00000573827 RPP30P78346 268 aaKnown RBP12.57□□□□□ -0.4
SMG6-214ENST00000573827 TMEM14EPQ6UXP3 125 aa12.57□□□□□ -0.4
SMG6-214ENST00000573827 TMEM144Q7Z5S9 345 aa12.57□□□□□ -0.4
SMG6-214ENST00000573827 COQ8AQ8NI60 647 aa12.57□□□□□ -0.4
SMG6-214ENST00000573827 MITD1Q8WV92 249 aa12.57□□□□□ -0.4
SMG6-214ENST00000573827 SMIM8Q96KF7 97 aa12.57□□□□□ -0.4
SMG6-214ENST00000573827 CLUHP3Q96NS8 147 aa12.57□□□□□ -0.4
SMG6-214ENST00000573827 SLC25A32Q9H2D1 315 aa12.57□□□□□ -0.4
SMG6-214ENST00000573827 SAV1Q9H4B6 383 aaPredicted RBP12.57□□□□□ -0.4
SMG6-214ENST00000573827 FBXL17Q9UF56 701 aa12.57□□□□□ -0.4
SMG6-214ENST00000573827 TBC1D24Q9ULP9 559 aa12.57□□□□□ -0.4
SMG6-214ENST00000573827 CFDP00746 253 aaPredicted RBP12.56□□□□□ -0.4
SMG6-214ENST00000573827 INPP1P49441 399 aa12.56□□□□□ -0.4
SMG6-214ENST00000573827 ZNF705AQ6ZN79 300 aaPredicted RBP12.56□□□□□ -0.4
SMG6-214ENST00000573827 ZNF709Q8N972 641 aa12.56□□□□□ -0.4
SMG6-214ENST00000573827 C20orf173Q96LM9 149 aa12.56□□□□□ -0.4
SMG6-214ENST00000573827 PFDN2Q9UHV9 154 aa12.56□□□□□ -0.4
SMG6-214ENST00000573827 RCL1Q9Y2P8 373 aaKnown RBP12.56□□□□□ -0.4
SMG6-214ENST00000573827 ZNF98A6NK75 572 aa12.55□□□□□ -0.4
SMG6-214ENST00000573827 ISLRO14498 428 aa12.55□□□□□ -0.4
SMG6-214ENST00000573827 SSSCA1O60232 199 aa12.55□□□□□ -0.4
SMG6-214ENST00000573827 C4orf46Q504U0 113 aa12.55□□□□□ -0.4
SMG6-214ENST00000573827 LGALS9CQ6DKI2 356 aa12.55□□□□□ -0.4
SMG6-214ENST00000573827 FOXI2Q6ZQN5 318 aa12.55□□□□□ -0.4
SMG6-214ENST00000573827 OR8I2Q8N0Y5 310 aa12.55□□□□□ -0.4
SMG6-214ENST00000573827 XCL2Q9UBD3 114 aa12.55□□□□□ -0.4
SMG6-214ENST00000573827 CELA1Q9UNI1 258 aa12.55□□□□□ -0.4
SMG6-214ENST00000573827 CENPXA8MT69 81 aa12.54□□□□□ -0.4
SMG6-214ENST00000573827 A8MTW9 85 aa12.54□□□□□ -0.4
SMG6-214ENST00000573827 ZBTB8BQ8NAP8 495 aaPredicted RBP12.54□□□□□ -0.4
SMG6-214ENST00000573827 C20orf85Q9H1P6 137 aa12.54□□□□□ -0.4
SMG6-214ENST00000573827 PSENENQ9NZ42 101 aa12.54□□□□□ -0.4
SMG6-214ENST00000573827 NDUFA13Q9P0J0 144 aa12.54□□□□□ -0.4
SMG6-214ENST00000573827 ZNF705FA8MVS1 300 aaPredicted RBP12.53□□□□□ -0.4
SMG6-214ENST00000573827 F6UB75 175 aa12.53□□□□□ -0.4
SMG6-214ENST00000573827 LYRM1O43325 122 aa12.53□□□□□ -0.4
SMG6-214ENST00000573827 IFNA21P01568 189 aa12.53□□□□□ -0.4
SMG6-214ENST00000573827 ZNF705DP0CH99 300 aaPredicted RBP12.53□□□□□ -0.4
SMG6-214ENST00000573827 ZNF705BP0CI00 300 aaPredicted RBP12.53□□□□□ -0.4
SMG6-214ENST00000573827 HLA-DMBP28068 263 aa12.53□□□□□ -0.4
SMG6-214ENST00000573827 PLP1P60201 277 aa12.53□□□□□ -0.4
SMG6-214ENST00000573827 AKR1C1Q04828 323 aa12.53□□□□□ -0.4
SMG6-214ENST00000573827 ARL16Q0P5N6 197 aa12.53□□□□□ -0.4
SMG6-214ENST00000573827 IAH1Q2TAA2 248 aaPredicted RBP12.53□□□□□ -0.4
SMG6-214ENST00000573827 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa12.53□□□□□ -0.4
SMG6-214ENST00000573827 RPP25LQ8N5L8 163 aaKnown RBP12.53□□□□□ -0.4
SMG6-214ENST00000573827 BPIFCQ8NFQ6 507 aa12.53□□□□□ -0.4
SMG6-214ENST00000573827 LINC00052Q96N35 136 aa12.53□□□□□ -0.4
SMG6-214ENST00000573827 C1QTNF4Q9BXJ3 329 aa12.53□□□□□ -0.4
SMG6-214ENST00000573827 APLNQ9ULZ1 77 aa12.53□□□□□ -0.4
SMG6-214ENST00000573827 HERC2O95714 4834 aa12.52□□□□□ -0.4
SMG6-214ENST00000573827 TRAV8-2A0A0B4J237 113 aa12.52□□□□□ -0.41
SMG6-214ENST00000573827 A0A0J9YX75 114 aa12.52□□□□□ -0.41
SMG6-214ENST00000573827 FNDC10F2Z333 226 aa12.52□□□□□ -0.41
SMG6-214ENST00000573827 H3BRN7 92 aa12.52□□□□□ -0.41
SMG6-214ENST00000573827 K7EPK0 472 aa12.52□□□□□ -0.41
SMG6-214ENST00000573827 MBPP02686 304 aaPredicted RBP12.52□□□□□ -0.41
SMG6-214ENST00000573827 ORM2P19652 201 aa12.52□□□□□ -0.41
SMG6-214ENST00000573827 ID1P41134 155 aa12.52□□□□□ -0.41
SMG6-214ENST00000573827 TAS2R30P59541 319 aa12.52□□□□□ -0.41
SMG6-214ENST00000573827 DLK1P80370 383 aa12.52□□□□□ -0.41
SMG6-214ENST00000573827 CNPY1Q3B7I2 92 aa12.52□□□□□ -0.41
SMG6-214ENST00000573827 CYP2G1PQ6ZSU1 146 aa12.52□□□□□ -0.41
SMG6-214ENST00000573827 Q6ZTC4 211 aa12.52□□□□□ -0.41
SMG6-214ENST00000573827 C2CD4CQ8TF44 421 aa12.52□□□□□ -0.41
SMG6-214ENST00000573827 PPP1R14BQ96C90 147 aa12.52□□□□□ -0.41
SMG6-214ENST00000573827 NEU1Q99519 415 aa12.52□□□□□ -0.41
SMG6-214ENST00000573827 SCRT1Q9BWW7 348 aa12.52□□□□□ -0.41
SMG6-214ENST00000573827 C11orf1Q9H5F2 150 aa12.52□□□□□ -0.41
SMG6-214ENST00000573827 C7orf66A4D0T2 115 aa12.51□□□□□ -0.41
SMG6-214ENST00000573827 TSC22D2O75157 780 aa12.51□□□□□ -0.41
SMG6-214ENST00000573827 TCRBP04435 133 aa12.51□□□□□ -0.41
SMG6-214ENST00000573827 METTL15P1P0C7V9 234 aa12.51□□□□□ -0.41
SMG6-214ENST00000573827 NUTF2P61970 127 aaKnown RBP12.51□□□□□ -0.41
SMG6-214ENST00000573827 PRR20EP86478 221 aa12.51□□□□□ -0.41
SMG6-214ENST00000573827 PRR20CP86479 221 aa12.51□□□□□ -0.41
SMG6-214ENST00000573827 PRR20DP86480 221 aa12.51□□□□□ -0.41
SMG6-214ENST00000573827 PRR20BP86481 221 aa12.51□□□□□ -0.41
SMG6-214ENST00000573827 PRR20AP86496 221 aa12.51□□□□□ -0.41
SMG6-214ENST00000573827 C12orf74Q32Q52 190 aa12.51□□□□□ -0.41
SMG6-214ENST00000573827 AMTNQ6UX39 209 aa12.51□□□□□ -0.41
SMG6-214ENST00000573827 SHANK2-AS3Q9BTD1 123 aa12.51□□□□□ -0.41
SMG6-214ENST00000573827 RSG1Q9BU20 258 aa12.51□□□□□ -0.41
SMG6-214ENST00000573827 SLC25A39Q9BZJ4 359 aaPredicted RBP12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 61 ms