RNA–Protein interactions for RNA: ENST00000570001.5

PDXDC1-217, Transcript of pyridoxal dependent decarboxylase domain containing 1, humanhuman

TSL 2

Gene PDXDC1, Length 4,828 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDXDC1-217ENST00000570001 DTX2Q86UW9 622 aa9.3□□□□□ -0.92
PDXDC1-217ENST00000570001 ITLN2Q8WWU7 325 aaPredicted RBP9.3□□□□□ -0.92
PDXDC1-217ENST00000570001 EEF1AKMT3Q96AZ1 226 aa9.3□□□□□ -0.92
PDXDC1-217ENST00000570001 TRAV40A0A0B4J280 105 aa9.3□□□□□ -0.92
PDXDC1-217ENST00000570001 ADMP35318 185 aa9.3□□□□□ -0.92
PDXDC1-217ENST00000570001 UBE2E1P51965 193 aa9.3□□□□□ -0.92
PDXDC1-217ENST00000570001 ACTL10Q5JWF8 245 aa9.3□□□□□ -0.92
PDXDC1-217ENST00000570001 A1L4Q6 167 aa9.3□□□□□ -0.92
PDXDC1-217ENST00000570001 SRIP30626 198 aa9.3□□□□□ -0.92
PDXDC1-217ENST00000570001 C1orf122Q6ZSJ8 110 aa9.3□□□□□ -0.92
PDXDC1-217ENST00000570001 PGLYRP4Q96LB8 373 aa9.3□□□□□ -0.92
PDXDC1-217ENST00000570001 TNFRSF13BO14836 293 aaPredicted RBP9.3□□□□□ -0.92
PDXDC1-217ENST00000570001 NPFFO15130 113 aa9.3□□□□□ -0.92
PDXDC1-217ENST00000570001 ATP5G2Q06055 141 aa9.3□□□□□ -0.92
PDXDC1-217ENST00000570001 KIR3DL3Q8N743 410 aa9.3□□□□□ -0.92
PDXDC1-217ENST00000570001 METTL26Q96S19 204 aa9.3□□□□□ -0.92
PDXDC1-217ENST00000570001 TMSB15BA0A087X1C1 80 aa9.29□□□□□ -0.92
PDXDC1-217ENST00000570001 PAFAH1B2P68402 229 aa9.29□□□□□ -0.92
PDXDC1-217ENST00000570001 RHOGP84095 191 aa9.29□□□□□ -0.92
PDXDC1-217ENST00000570001 SMIM15Q7Z3B0 74 aa9.29□□□□□ -0.92
PDXDC1-217ENST00000570001 Q8N7P7 452 aa9.29□□□□□ -0.92
PDXDC1-217ENST00000570001 HIST1H2BLQ99880 126 aa9.29□□□□□ -0.92
PDXDC1-217ENST00000570001 PRORYQ9H606 182 aa9.29□□□□□ -0.92
PDXDC1-217ENST00000570001 TANC2Q9HCD6 1990 aa9.29□□□□□ -0.92
PDXDC1-217ENST00000570001 IZUMO1RA6ND01 250 aa9.29□□□□□ -0.92
PDXDC1-217ENST00000570001 FSTL3O95633 263 aa9.29□□□□□ -0.92
PDXDC1-217ENST00000570001 MUC3AQ02505 3323 aa9.29□□□□□ -0.92
PDXDC1-217ENST00000570001 GCGP01275 180 aa9.29□□□□□ -0.92
PDXDC1-217ENST00000570001 PF4V1P10720 104 aa9.29□□□□□ -0.92
PDXDC1-217ENST00000570001 RIGQ13278 110 aa9.29□□□□□ -0.92
PDXDC1-217ENST00000570001 EXOC3-AS1Q8N2X6 119 aa9.29□□□□□ -0.92
PDXDC1-217ENST00000570001 NAV3Q8IVL0 2385 aa9.28□□□□□ -0.92
PDXDC1-217ENST00000570001 IGHV3OR16-13A0A075B7E8 117 aa9.28□□□□□ -0.92
PDXDC1-217ENST00000570001 IGHV3-74A0A0B4J1X5 117 aa9.28□□□□□ -0.92
PDXDC1-217ENST00000570001 HIGD1CA8MV81 97 aa9.28□□□□□ -0.92
PDXDC1-217ENST00000570001 IGLC1P0CG04 106 aa9.28□□□□□ -0.92
PDXDC1-217ENST00000570001 MORN5Q5VZ52 161 aa9.28□□□□□ -0.92
PDXDC1-217ENST00000570001 CLEC19AQ6UXS0 136 aa9.28□□□□□ -0.92
PDXDC1-217ENST00000570001 OR5R1Q8NH85 324 aa9.28□□□□□ -0.92
PDXDC1-217ENST00000570001 RPP21Q9H633 154 aaKnown RBP9.28□□□□□ -0.92
PDXDC1-217ENST00000570001 TCRAP04437 139 aa9.28□□□□□ -0.92
PDXDC1-217ENST00000570001 RAB9AP51151 201 aa9.28□□□□□ -0.92
PDXDC1-217ENST00000570001 ZNF705AQ6ZN79 300 aaPredicted RBP9.28□□□□□ -0.92
PDXDC1-217ENST00000570001 TMEM219Q86XT9 240 aa9.28□□□□□ -0.92
PDXDC1-217ENST00000570001 HSPB9Q9BQS6 159 aa9.28□□□□□ -0.92
PDXDC1-217ENST00000570001 MRPL36Q9P0J6 103 aaKnown RBP9.28□□□□□ -0.92
PDXDC1-217ENST00000570001 HIVEP3Q5T1R4 2406 aa9.28□□□□□ -0.92
PDXDC1-217ENST00000570001 C20orf202A1L168 122 aa9.28□□□□□ -0.92
PDXDC1-217ENST00000570001 C15orf32Q32M92 178 aa9.28□□□□□ -0.92
PDXDC1-217ENST00000570001 NUDT10Q8NFP7 164 aa9.28□□□□□ -0.92
PDXDC1-217ENST00000570001 NUDT11Q96G61 164 aa9.28□□□□□ -0.92
PDXDC1-217ENST00000570001 RAI1Q7Z5J4 1906 aaPredicted RBP9.28□□□□□ -0.92
PDXDC1-217ENST00000570001 TOMM40O96008 361 aa9.28□□□□□ -0.92
PDXDC1-217ENST00000570001 HOXB4P17483 251 aaPredicted RBP9.28□□□□□ -0.92
PDXDC1-217ENST00000570001 BRD3OSQ6XYD6 125 aa9.28□□□□□ -0.92
PDXDC1-217ENST00000570001 GSN-AS1Q9NRJ2 163 aa9.28□□□□□ -0.92
PDXDC1-217ENST00000570001 TRGV3P03979 118 aa9.27□□□□□ -0.93
PDXDC1-217ENST00000570001 RELQ04864 619 aaPredicted RBP9.27□□□□□ -0.93
PDXDC1-217ENST00000570001 DPF1Q92782 380 aa9.27□□□□□ -0.93
PDXDC1-217ENST00000570001 FXYD5Q96DB9 178 aa9.27□□□□□ -0.93
PDXDC1-217ENST00000570001 HSBP1L1C9JCN9 74 aa9.27□□□□□ -0.93
PDXDC1-217ENST00000570001 H0Y8G0 127 aa9.27□□□□□ -0.93
PDXDC1-217ENST00000570001 ORM1P02763 201 aa9.27□□□□□ -0.93
PDXDC1-217ENST00000570001 TYMSP04818 313 aa9.27□□□□□ -0.93
PDXDC1-217ENST00000570001 TMEM183BQ1AE95 376 aa9.27□□□□□ -0.93
PDXDC1-217ENST00000570001 LY6G5BQ8NDX9 201 aa9.27□□□□□ -0.93
PDXDC1-217ENST00000570001 TRBV20OR9-2A0A075B6H5 130 aa9.27□□□□□ -0.93
PDXDC1-217ENST00000570001 PKIAP61925 76 aa9.27□□□□□ -0.93
PDXDC1-217ENST00000570001 PATE2Q6UY27 113 aa9.27□□□□□ -0.93
PDXDC1-217ENST00000570001 C11orf42Q8N5U0 333 aa9.27□□□□□ -0.93
PDXDC1-217ENST00000570001 VAMP8Q9BV40 100 aa9.27□□□□□ -0.93
PDXDC1-217ENST00000570001 GNB1LQ9BYB4 327 aa9.27□□□□□ -0.93
PDXDC1-217ENST00000570001 SH2D7A6NKC9 451 aaPredicted RBP9.26□□□□□ -0.93
PDXDC1-217ENST00000570001 K7EN84 100 aa9.26□□□□□ -0.93
PDXDC1-217ENST00000570001 DMRT1Q9Y5R6 373 aa9.26□□□□□ -0.93
PDXDC1-217ENST00000570001 IGHV3-49A0A0A0MS15 119 aa9.26□□□□□ -0.93
PDXDC1-217ENST00000570001 IGHV3-66A0A0C4DH42 116 aa9.26□□□□□ -0.93
PDXDC1-217ENST00000570001 TEX22C9J3V5 150 aa9.26□□□□□ -0.93
PDXDC1-217ENST00000570001 PRB4P10163 310 aaPredicted RBP9.26□□□□□ -0.93
PDXDC1-217ENST00000570001 ZFP36P26651 326 aaKnown RBP9.26□□□□□ -0.93
PDXDC1-217ENST00000570001 HBBP68871 147 aa9.26□□□□□ -0.93
PDXDC1-217ENST00000570001 KLF2Q9Y5W3 355 aaPredicted RBP9.26□□□□□ -0.93
PDXDC1-217ENST00000570001 ARHGAP32A7KAX9 2087 aa9.26□□□□□ -0.93
PDXDC1-217ENST00000570001 TMEM189A5PLL7 270 aa9.26□□□□□ -0.93
PDXDC1-217ENST00000570001 M0R2Z0 102 aa9.26□□□□□ -0.93
PDXDC1-217ENST00000570001 SCGB2A2Q13296 93 aa9.26□□□□□ -0.93
PDXDC1-217ENST00000570001 BATFQ16520 125 aa9.26□□□□□ -0.93
PDXDC1-217ENST00000570001 SHANK2-AS3Q9BTD1 123 aa9.26□□□□□ -0.93
PDXDC1-217ENST00000570001 ZNF207O43670 478 aaKnown RBP9.26□□□□□ -0.93
PDXDC1-217ENST00000570001 AMBPP02760 352 aa9.26□□□□□ -0.93
PDXDC1-217ENST00000570001 RAB4AP20338 218 aa9.26□□□□□ -0.93
PDXDC1-217ENST00000570001 TCF24Q7RTU0 167 aa9.26□□□□□ -0.93
PDXDC1-217ENST00000570001 NEU1Q99519 415 aa9.26□□□□□ -0.93
PDXDC1-217ENST00000570001 LINC00527Q9UJ94 153 aa9.26□□□□□ -0.93
PDXDC1-217ENST00000570001 IGKV3-7A0A075B6H7 116 aa9.25□□□□□ -0.93
PDXDC1-217ENST00000570001 FCN3O75636 299 aa9.25□□□□□ -0.93
PDXDC1-217ENST00000570001 CSN3P07498 182 aa9.25□□□□□ -0.93
PDXDC1-217ENST00000570001 C11orf71Q6IPW1 123 aa9.25□□□□□ -0.93
PDXDC1-217ENST00000570001 TSKUQ8WUA8 353 aa9.25□□□□□ -0.93
PDXDC1-217ENST00000570001 FAM167A-AS1Q96KT0 104 aa9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms