RNA–Protein interactions for RNA: ENST00000569046.1

HMGB1P6-201, Transcript of high mobility group box 1 pseudogene 6, humanhuman

BASIC

Gene HMGB1P6, Length 646 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P6-201ENST00000569046 ZNF850A8MQ14 1090 aa2.16□□□□□ -2.06
HMGB1P6-201ENST00000569046 TMEM238C9JI98 176 aa2.16□□□□□ -2.06
HMGB1P6-201ENST00000569046 C11orf94C9JXX5 98 aa2.16□□□□□ -2.06
HMGB1P6-201ENST00000569046 H0YJX3 145 aa2.16□□□□□ -2.06
HMGB1P6-201ENST00000569046 M0R1W7 72 aa2.16□□□□□ -2.06
HMGB1P6-201ENST00000569046 UPK2O00526 184 aa2.16□□□□□ -2.06
HMGB1P6-201ENST00000569046 FFAR1O14842 300 aa2.16□□□□□ -2.06
HMGB1P6-201ENST00000569046 OR2A4O95047 310 aa2.16□□□□□ -2.06
HMGB1P6-201ENST00000569046 FSTL3O95633 263 aa2.16□□□□□ -2.06
HMGB1P6-201ENST00000569046 IGHV3-7P01780 117 aa2.16□□□□□ -2.06
HMGB1P6-201ENST00000569046 MT-ND4P03905 459 aa2.16□□□□□ -2.06
HMGB1P6-201ENST00000569046 TSPAN19P0C672 248 aa2.16□□□□□ -2.06
HMGB1P6-201ENST00000569046 PSG2P11465 335 aa2.16□□□□□ -2.06
HMGB1P6-201ENST00000569046 IDO1P14902 403 aa2.16□□□□□ -2.06
HMGB1P6-201ENST00000569046 CXCL2P19875 107 aa2.16□□□□□ -2.06
HMGB1P6-201ENST00000569046 CFL1P23528 166 aaKnown RBP2.16□□□□□ -2.06
HMGB1P6-201ENST00000569046 IL3RAP26951 378 aa2.16□□□□□ -2.06
HMGB1P6-201ENST00000569046 TAS2R43P59537 309 aa2.16□□□□□ -2.06
HMGB1P6-201ENST00000569046 POLR2GP62487 172 aaKnown RBP eCLIP2.16□□□□□ -2.06
HMGB1P6-201ENST00000569046 HIST1H3AP68431 136 aa2.16□□□□□ -2.06
HMGB1P6-201ENST00000569046 MEF2CQ06413 473 aaPredicted RBP2.16□□□□□ -2.06
HMGB1P6-201ENST00000569046 Q499Y3 187 aa2.16□□□□□ -2.06
HMGB1P6-201ENST00000569046 UBE2NLQ5JXB2 153 aa2.16□□□□□ -2.06
HMGB1P6-201ENST00000569046 HIST2H3PS2Q5TEC6 136 aa2.16□□□□□ -2.06
HMGB1P6-201ENST00000569046 OR10K2Q6IF99 312 aa2.16□□□□□ -2.06
HMGB1P6-201ENST00000569046 HIST2H3AQ71DI3 136 aa2.16□□□□□ -2.06
HMGB1P6-201ENST00000569046 LINC00596Q86U02 117 aa2.16□□□□□ -2.06
HMGB1P6-201ENST00000569046 AKAP14Q86UN6 197 aa2.16□□□□□ -2.06
HMGB1P6-201ENST00000569046 RPP25LQ8N5L8 163 aaKnown RBP2.16□□□□□ -2.06
HMGB1P6-201ENST00000569046 Q8N9W7 124 aa2.16□□□□□ -2.06
HMGB1P6-201ENST00000569046 SLC26A10Q8NG04 563 aa2.16□□□□□ -2.06
HMGB1P6-201ENST00000569046 OR4X2Q8NGF9 303 aa2.16□□□□□ -2.06
HMGB1P6-201ENST00000569046 OR10A6Q8NH74 314 aa2.16□□□□□ -2.06
HMGB1P6-201ENST00000569046 ZNRF2Q8NHG8 242 aa2.16□□□□□ -2.06
HMGB1P6-201ENST00000569046 RPS4Y2Q8TD47 263 aa2.16□□□□□ -2.06
HMGB1P6-201ENST00000569046 ASB17Q8WXJ9 295 aa2.16□□□□□ -2.06
HMGB1P6-201ENST00000569046 OR10C1Q96KK4 312 aa2.16□□□□□ -2.06
HMGB1P6-201ENST00000569046 OR2A7Q96R45 310 aa2.16□□□□□ -2.06
HMGB1P6-201ENST00000569046 VSIRQ9H7M9 311 aa2.16□□□□□ -2.06
HMGB1P6-201ENST00000569046 PARP11Q9NR21 331 aa2.16□□□□□ -2.06
HMGB1P6-201ENST00000569046 NUFIP1Q9UHK0 495 aaKnown RBP2.16□□□□□ -2.06
HMGB1P6-201ENST00000569046 V9GYQ6 96 aa2.16□□□□□ -2.06
HMGB1P6-201ENST00000569046 HECTD4Q9Y4D8 3996 aa2.16□□□□□ -2.06
HMGB1P6-201ENST00000569046 HERC2O95714 4834 aa2.16□□□□□ -2.06
HMGB1P6-201ENST00000569046 ALMS1Q8TCU4 4167 aa2.16□□□□□ -2.06
HMGB1P6-201ENST00000569046 KIAA2026Q5HYC2 2103 aa2.15□□□□□ -2.06
HMGB1P6-201ENST00000569046 A0A087WUU8 490 aa2.15□□□□□ -2.07
HMGB1P6-201ENST00000569046 IGHV3-66A0A0C4DH42 116 aa2.15□□□□□ -2.07
HMGB1P6-201ENST00000569046 PGPA6NDG6 321 aa2.15□□□□□ -2.07
HMGB1P6-201ENST00000569046 SMIM9A6NGZ8 99 aa2.15□□□□□ -2.07
HMGB1P6-201ENST00000569046 A6NIN4 97 aa2.15□□□□□ -2.07
HMGB1P6-201ENST00000569046 RFPL4AA6NLU0 287 aa2.15□□□□□ -2.07
HMGB1P6-201ENST00000569046 RFPL4AL1F8VTS6 287 aa2.15□□□□□ -2.07
HMGB1P6-201ENST00000569046 M0R135 149 aa2.15□□□□□ -2.07
HMGB1P6-201ENST00000569046 DENRO43583 198 aaKnown RBP2.15□□□□□ -2.07
HMGB1P6-201ENST00000569046 COX7A2P2O60397 106 aa2.15□□□□□ -2.07
HMGB1P6-201ENST00000569046 DEDDO75618 318 aa2.15□□□□□ -2.07
HMGB1P6-201ENST00000569046 IGLV2-8P01709 118 aa2.15□□□□□ -2.07
HMGB1P6-201ENST00000569046 CD14P08571 375 aa2.15□□□□□ -2.07
HMGB1P6-201ENST00000569046 MRPL3P09001 348 aaKnown RBP2.15□□□□□ -2.07
HMGB1P6-201ENST00000569046 LINC00614P0C842 121 aa2.15□□□□□ -2.07
HMGB1P6-201ENST00000569046 MUC1P15941 1255 aaPredicted RBP2.15□□□□□ -2.07
HMGB1P6-201ENST00000569046 GPX2P18283 190 aa2.15□□□□□ -2.07
HMGB1P6-201ENST00000569046 CCR6P51684 374 aa2.15□□□□□ -2.07
HMGB1P6-201ENST00000569046 EDDM3BP56851 147 aa2.15□□□□□ -2.07
HMGB1P6-201ENST00000569046 FXYD6P3P58550 94 aa2.15□□□□□ -2.07
HMGB1P6-201ENST00000569046 RAB2AP61019 212 aa2.15□□□□□ -2.07
HMGB1P6-201ENST00000569046 PRDX4Q13162 271 aa2.15□□□□□ -2.07
HMGB1P6-201ENST00000569046 KRR1Q13601 381 aaKnown RBP2.15□□□□□ -2.07
HMGB1P6-201ENST00000569046 SSX1Q16384 188 aa2.15□□□□□ -2.07
HMGB1P6-201ENST00000569046 WHAMMP3Q1A5X7 153 aa2.15□□□□□ -2.07
HMGB1P6-201ENST00000569046 KLHL12Q53G59 568 aa2.15□□□□□ -2.07
HMGB1P6-201ENST00000569046 AKIRIN2Q53H80 203 aa2.15□□□□□ -2.07
HMGB1P6-201ENST00000569046 CENPWQ5EE01 88 aa2.15□□□□□ -2.07
HMGB1P6-201ENST00000569046 ZNF684Q5T5D7 378 aa2.15□□□□□ -2.07
HMGB1P6-201ENST00000569046 FAM222AQ5U5X8 452 aa2.15□□□□□ -2.07
HMGB1P6-201ENST00000569046 SMARCD3Q6STE5 483 aa2.15□□□□□ -2.07
HMGB1P6-201ENST00000569046 KRTAP5-5Q701N2 237 aaPredicted RBP2.15□□□□□ -2.07
HMGB1P6-201ENST00000569046 FAM19A3Q7Z5A8 133 aa2.15□□□□□ -2.07
HMGB1P6-201ENST00000569046 PDPNQ86YL7 162 aa2.15□□□□□ -2.07
HMGB1P6-201ENST00000569046 ZNF695Q8IW36 515 aa2.15□□□□□ -2.07
HMGB1P6-201ENST00000569046 OR4K13Q8NH42 304 aa2.15□□□□□ -2.07
HMGB1P6-201ENST00000569046 ISOC1Q96CN7 298 aa2.15□□□□□ -2.07
HMGB1P6-201ENST00000569046 MALSU1Q96EH3 234 aa2.15□□□□□ -2.07
HMGB1P6-201ENST00000569046 ZNF799Q96GE5 643 aa2.15□□□□□ -2.07
HMGB1P6-201ENST00000569046 ERMAPQ96PL5 475 aaPredicted RBP2.15□□□□□ -2.07
HMGB1P6-201ENST00000569046 NMNAT3Q96T66 252 aa2.15□□□□□ -2.07
HMGB1P6-201ENST00000569046 OR52D1Q9H346 318 aa2.15□□□□□ -2.07
HMGB1P6-201ENST00000569046 NMNAT1Q9HAN9 279 aaPredicted RBP2.15□□□□□ -2.07
HMGB1P6-201ENST00000569046 FKBP14Q9NWM8 211 aa2.15□□□□□ -2.07
HMGB1P6-201ENST00000569046 GLS2Q9UI32 602 aa2.15□□□□□ -2.07
HMGB1P6-201ENST00000569046 POMPQ9Y244 141 aa2.15□□□□□ -2.07
HMGB1P6-201ENST00000569046 LSM5Q9Y4Y9 91 aaKnown RBP2.15□□□□□ -2.07
HMGB1P6-201ENST00000569046 PLECQ15149 4684 aaKnown RBP2.15□□□□□ -2.07
HMGB1P6-201ENST00000569046 A0A1B0GVX0 72 aa2.14□□□□□ -2.07
HMGB1P6-201ENST00000569046 GMNCA6NCL1 334 aa2.14□□□□□ -2.07
HMGB1P6-201ENST00000569046 ODF3BA8MYP8 253 aa2.14□□□□□ -2.07
HMGB1P6-201ENST00000569046 CA2P00918 260 aa2.14□□□□□ -2.07
HMGB1P6-201ENST00000569046 GYPBP06028 91 aa2.14□□□□□ -2.07
HMGB1P6-201ENST00000569046 SEC11BP0C7V7 166 aa2.14□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms