RNA–Protein interactions for RNA: ENST00000566756.5

CMTM3-213, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 2

Gene CMTM3, Length 1,950 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-213ENST00000566756 TRAV34A0A0B4J273 112 aa13.38□□□□□ -0.27
CMTM3-213ENST00000566756 RPLP1P05386 114 aaKnown RBP13.38□□□□□ -0.27
CMTM3-213ENST00000566756 GP9P14770 177 aa13.38□□□□□ -0.27
CMTM3-213ENST00000566756 PMCHP20382 165 aa13.38□□□□□ -0.27
CMTM3-213ENST00000566756 OR1B1Q8NGR6 318 aa13.38□□□□□ -0.27
CMTM3-213ENST00000566756 PRSS22Q9GZN4 317 aa13.38□□□□□ -0.27
CMTM3-213ENST00000566756 F11RQ9Y624 299 aaKnown RBP13.38□□□□□ -0.27
CMTM3-213ENST00000566756 USP24Q9UPU5 2620 aa13.37□□□□□ -0.27
CMTM3-213ENST00000566756 PGPA6NDG6 321 aa13.37□□□□□ -0.27
CMTM3-213ENST00000566756 ENSAO43768 121 aaKnown RBP13.37□□□□□ -0.27
CMTM3-213ENST00000566756 ORM2P19652 201 aa13.37□□□□□ -0.27
CMTM3-213ENST00000566756 GFRA4Q9GZZ7 299 aa13.37□□□□□ -0.27
CMTM3-213ENST00000566756 TMEM14CQ9P0S9 112 aa13.37□□□□□ -0.27
CMTM3-213ENST00000566756 RALYQ9UKM9 306 aaKnown RBP13.37□□□□□ -0.27
CMTM3-213ENST00000566756 CACNA1BQ00975 2339 aa13.36□□□□□ -0.27
CMTM3-213ENST00000566756 IGHV2-26A0A0B4J1V2 119 aa13.36□□□□□ -0.27
CMTM3-213ENST00000566756 FAM231BA6NCW3 169 aa13.36□□□□□ -0.27
CMTM3-213ENST00000566756 HIGD1CA8MV81 97 aa13.36□□□□□ -0.27
CMTM3-213ENST00000566756 MOSP00540 346 aa13.36□□□□□ -0.27
CMTM3-213ENST00000566756 LTAP01374 205 aa13.36□□□□□ -0.27
CMTM3-213ENST00000566756 C3orf79P0CE67 100 aa13.36□□□□□ -0.27
CMTM3-213ENST00000566756 TNXAQ16473 311 aa13.36□□□□□ -0.27
CMTM3-213ENST00000566756 C11orf71Q6IPW1 123 aa13.36□□□□□ -0.27
CMTM3-213ENST00000566756 BORCS7Q96B45 105 aa13.36□□□□□ -0.27
CMTM3-213ENST00000566756 ALKBH7Q9BT30 221 aaPredicted RBP13.36□□□□□ -0.27
CMTM3-213ENST00000566756 A8MWL6 223 aa13.36□□□□□ -0.27
CMTM3-213ENST00000566756 IGHV3-48P01763 117 aa13.36□□□□□ -0.27
CMTM3-213ENST00000566756 MMDQ15546 238 aa13.36□□□□□ -0.27
CMTM3-213ENST00000566756 PMCHL1Q16048 86 aa13.36□□□□□ -0.27
CMTM3-213ENST00000566756 GDF5OSQ5U4N7 250 aa13.36□□□□□ -0.27
CMTM3-213ENST00000566756 HCP5Q6MZN7 132 aa13.36□□□□□ -0.27
CMTM3-213ENST00000566756 ZNF841Q6ZN19 808 aa13.36□□□□□ -0.27
CMTM3-213ENST00000566756 RPP21Q9H633 154 aaKnown RBP13.36□□□□□ -0.27
CMTM3-213ENST00000566756 IGHV1-3A0A0C4DH29 117 aa13.35□□□□□ -0.27
CMTM3-213ENST00000566756 TRBV6-1A0A0K0K1D8 114 aa13.35□□□□□ -0.27
CMTM3-213ENST00000566756 C19orf71A6NCJ1 209 aa13.35□□□□□ -0.27
CMTM3-213ENST00000566756 GNG5P63218 68 aa13.35□□□□□ -0.27
CMTM3-213ENST00000566756 PPP1R27Q86WC6 154 aa13.35□□□□□ -0.27
CMTM3-213ENST00000566756 CLEC7AQ9BXN2 247 aa13.35□□□□□ -0.27
CMTM3-213ENST00000566756 RAB1BQ9H0U4 201 aa13.35□□□□□ -0.27
CMTM3-213ENST00000566756 INSIG2Q9Y5U4 225 aa13.35□□□□□ -0.27
CMTM3-213ENST00000566756 TEX22C9J3V5 150 aa13.34□□□□□ -0.27
CMTM3-213ENST00000566756 BUB1B-PAK6H3BSN5 160 aa13.34□□□□□ -0.27
CMTM3-213ENST00000566756 TCRAP04437 139 aa13.34□□□□□ -0.27
CMTM3-213ENST00000566756 CYB5R2Q6BCY4 276 aa13.34□□□□□ -0.27
CMTM3-213ENST00000566756 DTX2Q86UW9 622 aa13.34□□□□□ -0.27
CMTM3-213ENST00000566756 KLHDC1Q8N7A1 406 aa13.34□□□□□ -0.27
CMTM3-213ENST00000566756 UQCR10Q9UDW1 63 aa13.34□□□□□ -0.27
CMTM3-213ENST00000566756 RNF24Q9Y225 148 aa13.34□□□□□ -0.27
CMTM3-213ENST00000566756 HBBP68871 147 aa13.34□□□□□ -0.27
CMTM3-213ENST00000566756 ZNF124Q15973 351 aa13.34□□□□□ -0.27
CMTM3-213ENST00000566756 SPATA45Q537H7 98 aa13.34□□□□□ -0.27
CMTM3-213ENST00000566756 DMRTA1Q5VZB9 504 aa13.34□□□□□ -0.27
CMTM3-213ENST00000566756 PRR27Q6MZM9 219 aa13.34□□□□□ -0.27
CMTM3-213ENST00000566756 BLNKQ8WV28 456 aa13.34□□□□□ -0.27
CMTM3-213ENST00000566756 Q9H3A6 140 aa13.34□□□□□ -0.27
CMTM3-213ENST00000566756 OTORQ9NRC9 128 aa13.34□□□□□ -0.27
CMTM3-213ENST00000566756 HIGD1AQ9Y241 93 aa13.34□□□□□ -0.27
CMTM3-213ENST00000566756 IGHV3-72A0A0B4J1Y9 119 aa13.33□□□□□ -0.28
CMTM3-213ENST00000566756 C20orf202A1L168 122 aa13.33□□□□□ -0.28
CMTM3-213ENST00000566756 HSBP1O75506 76 aa13.33□□□□□ -0.28
CMTM3-213ENST00000566756 GAGE1Q13065 139 aa13.33□□□□□ -0.28
CMTM3-213ENST00000566756 RUSC1-AS1Q66K80 236 aa13.33□□□□□ -0.28
CMTM3-213ENST00000566756 NEU4Q8WWR8 484 aaPredicted RBP13.33□□□□□ -0.28
CMTM3-213ENST00000566756 NPIPB6E9PJ23 425 aa13.32□□□□□ -0.28
CMTM3-213ENST00000566756 IGLC1P0CG04 106 aa13.32□□□□□ -0.28
CMTM3-213ENST00000566756 CFAP46Q8IYW2 2715 aa13.32□□□□□ -0.28
CMTM3-213ENST00000566756 P01737 135 aa13.32□□□□□ -0.28
CMTM3-213ENST00000566756 IGLC2P0DOY2 106 aa13.32□□□□□ -0.28
CMTM3-213ENST00000566756 IGLC3P0DOY3 106 aa13.32□□□□□ -0.28
CMTM3-213ENST00000566756 FOSL1P15407 271 aa13.32□□□□□ -0.28
CMTM3-213ENST00000566756 VWC2LB2RUY7 222 aa13.31□□□□□ -0.28
CMTM3-213ENST00000566756 I3L2K1 104 aa13.31□□□□□ -0.28
CMTM3-213ENST00000566756 HOXB4P17483 251 aaPredicted RBP13.31□□□□□ -0.28
CMTM3-213ENST00000566756 FAM19A2Q8N3H0 131 aa13.31□□□□□ -0.28
CMTM3-213ENST00000566756 OR8B3Q8NGG8 313 aa13.31□□□□□ -0.28
CMTM3-213ENST00000566756 OR8B2Q96RD0 313 aa13.31□□□□□ -0.28
CMTM3-213ENST00000566756 NTF3P20783 257 aa13.31□□□□□ -0.28
CMTM3-213ENST00000566756 CNTFRP26992 372 aa13.31□□□□□ -0.28
CMTM3-213ENST00000566756 RBPMS2Q6ZRY4 209 aaKnown RBP13.31□□□□□ -0.28
CMTM3-213ENST00000566756 S100A7AQ86SG5 101 aa13.31□□□□□ -0.28
CMTM3-213ENST00000566756 FAM181BA6NEQ2 426 aa13.3□□□□□ -0.28
CMTM3-213ENST00000566756 LY6LH3BQJ8 138 aa13.3□□□□□ -0.28
CMTM3-213ENST00000566756 C19orf84I3L1E1 186 aa13.3□□□□□ -0.28
CMTM3-213ENST00000566756 GOSR1O95249 250 aa13.3□□□□□ -0.28
CMTM3-213ENST00000566756 PSG1P11464 419 aa13.3□□□□□ -0.28
CMTM3-213ENST00000566756 C16orf54Q6UWD8 224 aa13.3□□□□□ -0.28
CMTM3-213ENST00000566756 SRSF12Q8WXF0 261 aaKnown RBP13.3□□□□□ -0.28
CMTM3-213ENST00000566756 RPEQ96AT9 228 aa13.3□□□□□ -0.28
CMTM3-213ENST00000566756 CHCHD1Q96BP2 118 aaKnown RBP13.3□□□□□ -0.28
CMTM3-213ENST00000566756 DAZAP1Q96EP5 407 aaKnown RBP13.3□□□□□ -0.28
CMTM3-213ENST00000566756 C1RLQ9NZP8 487 aa13.3□□□□□ -0.28
CMTM3-213ENST00000566756 NAV3Q8IVL0 2385 aa13.3□□□□□ -0.28
CMTM3-213ENST00000566756 A0A1W2PPR1 153 aa13.29□□□□□ -0.28
CMTM3-213ENST00000566756 M0R2Z0 102 aa13.29□□□□□ -0.28
CMTM3-213ENST00000566756 BTF3P20290 206 aaKnown RBP13.29□□□□□ -0.28
CMTM3-213ENST00000566756 COL5A1-AS1Q5SY13 56 aa13.29□□□□□ -0.28
CMTM3-213ENST00000566756 Q86TA4 180 aa13.29□□□□□ -0.28
CMTM3-213ENST00000566756 SLC25A39Q9BZJ4 359 aaPredicted RBP13.29□□□□□ -0.28
CMTM3-213ENST00000566756 LYNX1G3V0Z9 82 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms