RNA–Protein interactions for RNA: ENST00000566635.5

HERC2-208, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 2, humanhuman

TSL 1 (best)

Gene HERC2, Length 2,114 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC2-208ENST00000566635 Q6ZSV7 163 aa13.7□□□□□ -0.22
HERC2-208ENST00000566635 ZNF491Q8N8L2 437 aa13.7□□□□□ -0.22
HERC2-208ENST00000566635 RNF125Q96EQ8 232 aa13.7□□□□□ -0.22
HERC2-208ENST00000566635 ZNF503Q96F45 646 aa13.7□□□□□ -0.22
HERC2-208ENST00000566635 SLC25A2Q9BXI2 301 aa13.7□□□□□ -0.22
HERC2-208ENST00000566635 SERTAD4Q9NUC0 356 aa13.7□□□□□ -0.22
HERC2-208ENST00000566635 ELOA3CA0A087WX78 387 aaPredicted RBP13.7□□□□□ -0.22
HERC2-208ENST00000566635 CYSRT1A8MQ03 144 aa13.7□□□□□ -0.22
HERC2-208ENST00000566635 CLDN34H7C241 214 aa13.7□□□□□ -0.22
HERC2-208ENST00000566635 CXorf1O96002 111 aa13.7□□□□□ -0.22
HERC2-208ENST00000566635 TRBV12-3P01733 135 aa13.7□□□□□ -0.22
HERC2-208ENST00000566635 BCL2P10415 239 aa13.7□□□□□ -0.22
HERC2-208ENST00000566635 USF2Q15853 346 aaPredicted RBP13.7□□□□□ -0.22
HERC2-208ENST00000566635 FAM167A-AS1Q96KT0 104 aa13.7□□□□□ -0.22
HERC2-208ENST00000566635 RNF2Q99496 336 aa13.7□□□□□ -0.22
HERC2-208ENST00000566635 TECRQ9NZ01 308 aaKnown RBP13.7□□□□□ -0.22
HERC2-208ENST00000566635 C8orf88P0DMB2 117 aa13.69□□□□□ -0.22
HERC2-208ENST00000566635 GCHFRP30047 84 aa13.69□□□□□ -0.22
HERC2-208ENST00000566635 ZNF506Q5JVG8 444 aa13.69□□□□□ -0.22
HERC2-208ENST00000566635 SVBPQ8N300 66 aa13.69□□□□□ -0.22
HERC2-208ENST00000566635 RXFP4Q8TDU9 374 aa13.69□□□□□ -0.22
HERC2-208ENST00000566635 ZNF418Q8TF45 676 aaPredicted RBP13.69□□□□□ -0.22
HERC2-208ENST00000566635 USMG5Q96IX5 58 aa13.69□□□□□ -0.22
HERC2-208ENST00000566635 HIGD1AQ9Y241 93 aa13.69□□□□□ -0.22
HERC2-208ENST00000566635 PUS1Q9Y606 427 aaKnown RBP eCLIP13.69□□□□□ -0.22
HERC2-208ENST00000566635 WI2-2373I1.2A0A1W2PRP0 233 aa13.69□□□□□ -0.22
HERC2-208ENST00000566635 OR7C2O60412 319 aa13.69□□□□□ -0.22
HERC2-208ENST00000566635 SCGB2A1O75556 95 aa13.69□□□□□ -0.22
HERC2-208ENST00000566635 AKR1D1P51857 326 aa13.69□□□□□ -0.22
HERC2-208ENST00000566635 HILS1P60008 231 aa13.69□□□□□ -0.22
HERC2-208ENST00000566635 PEA15Q15121 130 aa13.69□□□□□ -0.22
HERC2-208ENST00000566635 KHDC3LQ587J8 217 aa13.69□□□□□ -0.22
HERC2-208ENST00000566635 C10orf91Q5T1B1 145 aa13.69□□□□□ -0.22
HERC2-208ENST00000566635 LEMD1Q68G75 181 aa13.69□□□□□ -0.22
HERC2-208ENST00000566635 OR5AU1Q8NGC0 362 aa13.69□□□□□ -0.22
HERC2-208ENST00000566635 Q8WTZ3 238 aa13.69□□□□□ -0.22
HERC2-208ENST00000566635 IGHV3OR16-8A0A075B7F1 116 aa13.68□□□□□ -0.22
HERC2-208ENST00000566635 OR2C1O95371 312 aa13.68□□□□□ -0.22
HERC2-208ENST00000566635 RNASE1P07998 156 aaKnown RBP13.68□□□□□ -0.22
HERC2-208ENST00000566635 ADCYAP1P18509 176 aa13.68□□□□□ -0.22
HERC2-208ENST00000566635 PPT1P50897 306 aa13.68□□□□□ -0.22
HERC2-208ENST00000566635 UBE2G2P60604 165 aa13.68□□□□□ -0.22
HERC2-208ENST00000566635 TMEM218A2RU14 115 aa13.67□□□□□ -0.22
HERC2-208ENST00000566635 OR10J4P0C629 311 aa13.67□□□□□ -0.22
HERC2-208ENST00000566635 SFTA3P0C7M3 94 aa13.67□□□□□ -0.22
HERC2-208ENST00000566635 TAS2R45P59539 299 aa13.67□□□□□ -0.22
HERC2-208ENST00000566635 SLC35B1P78383 322 aa13.67□□□□□ -0.22
HERC2-208ENST00000566635 GAR1Q9NY12 217 aaKnown RBP13.67□□□□□ -0.22
HERC2-208ENST00000566635 MRPL27Q9P0M9 148 aaKnown RBP13.67□□□□□ -0.22
HERC2-208ENST00000566635 IFNA1P01562 189 aa13.67□□□□□ -0.22
HERC2-208ENST00000566635 RPLP1P05386 114 aaKnown RBP13.67□□□□□ -0.22
HERC2-208ENST00000566635 PYYP10082 97 aa13.67□□□□□ -0.22
HERC2-208ENST00000566635 PSMB3P49720 205 aa13.67□□□□□ -0.22
HERC2-208ENST00000566635 ZNF600Q6ZNG1 722 aa13.67□□□□□ -0.22
HERC2-208ENST00000566635 SLC25A39Q9BZJ4 359 aaPredicted RBP13.67□□□□□ -0.22
HERC2-208ENST00000566635 MANBALQ9NQG1 85 aa13.67□□□□□ -0.22
HERC2-208ENST00000566635 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP13.66□□□□□ -0.22
HERC2-208ENST00000566635 PAGE4O60829 102 aa13.66□□□□□ -0.22
HERC2-208ENST00000566635 PMS2P11Q13670 270 aa13.66□□□□□ -0.22
HERC2-208ENST00000566635 KIAA0141Q14154 515 aaPredicted RBP13.66□□□□□ -0.22
HERC2-208ENST00000566635 TEX38Q6PEX7 206 aa13.66□□□□□ -0.22
HERC2-208ENST00000566635 OR4X2Q8NGF9 303 aa13.66□□□□□ -0.22
HERC2-208ENST00000566635 OR5B12Q96R08 314 aa13.66□□□□□ -0.22
HERC2-208ENST00000566635 CARHSP1Q9Y2V2 147 aaKnown RBP13.66□□□□□ -0.22
HERC2-208ENST00000566635 A0A0G2JLM5 398 aa13.66□□□□□ -0.22
HERC2-208ENST00000566635 TMEM89A2RUT3 159 aa13.66□□□□□ -0.22
HERC2-208ENST00000566635 ARL3P36405 182 aa13.66□□□□□ -0.22
HERC2-208ENST00000566635 TOMM20LQ6UXN7 152 aa13.66□□□□□ -0.22
HERC2-208ENST00000566635 PQLC2Q6ZP29 291 aa13.66□□□□□ -0.22
HERC2-208ENST00000566635 ZFAND3Q9H8U3 227 aa13.66□□□□□ -0.22
HERC2-208ENST00000566635 FN1P02751 2386 aaKnown RBP13.65□□□□□ -0.22
HERC2-208ENST00000566635 SNAPINO95295 136 aa13.65□□□□□ -0.22
HERC2-208ENST00000566635 FOXE3Q13461 319 aa13.65□□□□□ -0.22
HERC2-208ENST00000566635 ZNF343Q6P1L6 599 aa13.65□□□□□ -0.22
HERC2-208ENST00000566635 ATP6V0BQ99437 205 aa13.65□□□□□ -0.22
HERC2-208ENST00000566635 VAX2Q9UIW0 290 aa13.65□□□□□ -0.22
HERC2-208ENST00000566635 H3BRN7 92 aa13.64□□□□□ -0.23
HERC2-208ENST00000566635 SRP19P09132 144 aaKnown RBP13.64□□□□□ -0.23
HERC2-208ENST00000566635 SNRPCP09234 159 aaKnown RBP13.64□□□□□ -0.23
HERC2-208ENST00000566635 UBE2L3P68036 154 aaKnown RBP13.64□□□□□ -0.23
HERC2-208ENST00000566635 YTHDF2Q9Y5A9 579 aaKnown RBP13.64□□□□□ -0.23
HERC2-208ENST00000566635 HSPB1P04792 205 aaKnown RBP13.64□□□□□ -0.23
HERC2-208ENST00000566635 ELANEP08246 267 aa13.64□□□□□ -0.23
HERC2-208ENST00000566635 CD81P60033 236 aa13.64□□□□□ -0.23
HERC2-208ENST00000566635 SHANK2-AS3Q9BTD1 123 aa13.64□□□□□ -0.23
HERC2-208ENST00000566635 PAXXQ9BUH6 204 aa13.64□□□□□ -0.23
HERC2-208ENST00000566635 CRYBA1P05813 215 aa13.63□□□□□ -0.23
HERC2-208ENST00000566635 ATP5G3P48201 142 aa13.63□□□□□ -0.23
HERC2-208ENST00000566635 CEBPGP53567 150 aa13.63□□□□□ -0.23
HERC2-208ENST00000566635 MEF2BQ02080 365 aaPredicted RBP13.63□□□□□ -0.23
HERC2-208ENST00000566635 KLHDC1Q8N7A1 406 aa13.63□□□□□ -0.23
HERC2-208ENST00000566635 CYB561D1Q8N8Q1 229 aa13.63□□□□□ -0.23
HERC2-208ENST00000566635 SLC35B3Q9H1N7 401 aa13.63□□□□□ -0.23
HERC2-208ENST00000566635 OR51M1Q9H341 326 aa13.63□□□□□ -0.23
HERC2-208ENST00000566635 BMPR1BO00238 502 aa13.63□□□□□ -0.23
HERC2-208ENST00000566635 GP9P14770 177 aa13.63□□□□□ -0.23
HERC2-208ENST00000566635 RELQ04864 619 aaPredicted RBP13.63□□□□□ -0.23
HERC2-208ENST00000566635 CST9LP1Q5W188 147 aa13.63□□□□□ -0.23
HERC2-208ENST00000566635 MYOZ3Q8TDC0 251 aa13.63□□□□□ -0.23
HERC2-208ENST00000566635 FXYD5Q96DB9 178 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms