RNA–Protein interactions for RNA: ENST00000565545.1

CSPG4P13-201, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 13, humanhuman

TSL 5

Gene CSPG4P13, Length 657 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P13-201ENST00000565545 ARL3P36405 182 aa14.74□□□□□ -0.05
CSPG4P13-201ENST00000565545 PPT1P50897 306 aa14.74□□□□□ -0.05
CSPG4P13-201ENST00000565545 LYZP61626 148 aa14.74□□□□□ -0.05
CSPG4P13-201ENST00000565545 KIAA0141Q14154 515 aaPredicted RBP14.74□□□□□ -0.05
CSPG4P13-201ENST00000565545 UQCC3Q6UW78 93 aa14.74□□□□□ -0.05
CSPG4P13-201ENST00000565545 KLHDC1Q8N7A1 406 aa14.74□□□□□ -0.05
CSPG4P13-201ENST00000565545 OR4X2Q8NGF9 303 aa14.74□□□□□ -0.05
CSPG4P13-201ENST00000565545 UBE2E2Q96LR5 201 aa14.74□□□□□ -0.05
CSPG4P13-201ENST00000565545 PBDC1Q9BVG4 233 aa14.74□□□□□ -0.05
CSPG4P13-201ENST00000565545 MRPL27Q9P0M9 148 aaKnown RBP14.74□□□□□ -0.05
CSPG4P13-201ENST00000565545 DOK5Q9P104 306 aa14.74□□□□□ -0.05
CSPG4P13-201ENST00000565545 RNF24Q9Y225 148 aa14.74□□□□□ -0.05
CSPG4P13-201ENST00000565545 IL4P05112 153 aa14.73□□□□□ -0.05
CSPG4P13-201ENST00000565545 PSMB3P49720 205 aa14.73□□□□□ -0.05
CSPG4P13-201ENST00000565545 KHDC3LQ587J8 217 aa14.73□□□□□ -0.05
CSPG4P13-201ENST00000565545 PQLC2Q6ZP29 291 aa14.73□□□□□ -0.05
CSPG4P13-201ENST00000565545 STXBP6Q8NFX7 210 aa14.73□□□□□ -0.05
CSPG4P13-201ENST00000565545 GNB4Q9HAV0 340 aa14.73□□□□□ -0.05
CSPG4P13-201ENST00000565545 IFNA1P01562 189 aa14.72□□□□□ -0.05
CSPG4P13-201ENST00000565545 RPLP1P05386 114 aaKnown RBP14.72□□□□□ -0.05
CSPG4P13-201ENST00000565545 TAGLN2P37802 199 aaKnown RBP14.72□□□□□ -0.05
CSPG4P13-201ENST00000565545 FGF8P55075 233 aaPredicted RBP14.72□□□□□ -0.05
CSPG4P13-201ENST00000565545 CCL20P78556 96 aa14.72□□□□□ -0.05
CSPG4P13-201ENST00000565545 SPATA31B1PQ5VZV4 182 aa14.72□□□□□ -0.05
CSPG4P13-201ENST00000565545 C10orf99Q6UWK7 81 aa14.72□□□□□ -0.05
CSPG4P13-201ENST00000565545 MIR17HGQ75NE6 70 aa14.72□□□□□ -0.05
CSPG4P13-201ENST00000565545 LINC00305Q7Z4B0 112 aa14.72□□□□□ -0.05
CSPG4P13-201ENST00000565545 OR5AU1Q8NGC0 362 aa14.72□□□□□ -0.05
CSPG4P13-201ENST00000565545 OR4F5Q8NH21 305 aa14.72□□□□□ -0.05
CSPG4P13-201ENST00000565545 WFDC12Q8WWY7 111 aa14.72□□□□□ -0.05
CSPG4P13-201ENST00000565545 FAM210AQ96ND0 272 aa14.72□□□□□ -0.05
CSPG4P13-201ENST00000565545 SMDT1Q9H4I9 107 aa14.72□□□□□ -0.05
CSPG4P13-201ENST00000565545 PEF1Q9UBV8 284 aaKnown RBP14.72□□□□□ -0.05
CSPG4P13-201ENST00000565545 PUS1Q9Y606 427 aaKnown RBP eCLIP14.72□□□□□ -0.05
CSPG4P13-201ENST00000565545 A0A1B0GV50 99 aa14.71□□□□□ -0.05
CSPG4P13-201ENST00000565545 BMPR1BO00238 502 aa14.71□□□□□ -0.05
CSPG4P13-201ENST00000565545 HMGB3O15347 200 aaKnown RBP14.71□□□□□ -0.05
CSPG4P13-201ENST00000565545 IGHV3-11P01762 117 aa14.71□□□□□ -0.05
CSPG4P13-201ENST00000565545 LCNL1Q6ZST4 164 aa14.71□□□□□ -0.05
CSPG4P13-201ENST00000565545 LINC01006Q8NI28 216 aa14.71□□□□□ -0.05
CSPG4P13-201ENST00000565545 WIPF2Q8TF74 440 aaPredicted RBP14.71□□□□□ -0.05
CSPG4P13-201ENST00000565545 PKD1L1Q8TDX9 2849 aa14.71□□□□□ -0.05
CSPG4P13-201ENST00000565545 NDUFA4O00483 81 aa14.7□□□□□ -0.06
CSPG4P13-201ENST00000565545 GGCTO75223 188 aaKnown RBP14.7□□□□□ -0.06
CSPG4P13-201ENST00000565545 ARL14EPLP0DKL9 152 aa14.7□□□□□ -0.06
CSPG4P13-201ENST00000565545 PEA15Q15121 130 aa14.7□□□□□ -0.06
CSPG4P13-201ENST00000565545 GUK1Q16774 197 aa14.7□□□□□ -0.06
CSPG4P13-201ENST00000565545 TOMM20LQ6UXN7 152 aa14.7□□□□□ -0.06
CSPG4P13-201ENST00000565545 SLC25A39Q9BZJ4 359 aaPredicted RBP14.7□□□□□ -0.06
CSPG4P13-201ENST00000565545 ZFAND3Q9H8U3 227 aa14.7□□□□□ -0.06
CSPG4P13-201ENST00000565545 MANBALQ9NQG1 85 aa14.7□□□□□ -0.06
CSPG4P13-201ENST00000565545 TMEM167BQ9NRX6 74 aa14.7□□□□□ -0.06
CSPG4P13-201ENST00000565545 ANKRD34BA5PLL1 514 aa14.69□□□□□ -0.06
CSPG4P13-201ENST00000565545 RBFOX3A6NFN3 312 aa14.69□□□□□ -0.06
CSPG4P13-201ENST00000565545 PPP5D1E7EU14 171 aa14.69□□□□□ -0.06
CSPG4P13-201ENST00000565545 LGALS1P09382 135 aaKnown RBP14.69□□□□□ -0.06
CSPG4P13-201ENST00000565545 GCHFRP30047 84 aa14.69□□□□□ -0.06
CSPG4P13-201ENST00000565545 CDX1P47902 265 aaPredicted RBP14.69□□□□□ -0.06
CSPG4P13-201ENST00000565545 ZNF414Q96IQ9 312 aa14.69□□□□□ -0.06
CSPG4P13-201ENST00000565545 FAM167A-AS1Q96KT0 104 aa14.69□□□□□ -0.06
CSPG4P13-201ENST00000565545 UHRF2Q96PU4 802 aa14.69□□□□□ -0.06
CSPG4P13-201ENST00000565545 CITED4Q96RK1 184 aa14.69□□□□□ -0.06
CSPG4P13-201ENST00000565545 SHANK2-AS3Q9BTD1 123 aa14.69□□□□□ -0.06
CSPG4P13-201ENST00000565545 SLC25A2Q9BXI2 301 aa14.69□□□□□ -0.06
CSPG4P13-201ENST00000565545 RABAC1Q9UI14 185 aa14.69□□□□□ -0.06
CSPG4P13-201ENST00000565545 H3BRN7 92 aa14.68□□□□□ -0.06
CSPG4P13-201ENST00000565545 ATP6V1G1O75348 118 aa14.68□□□□□ -0.06
CSPG4P13-201ENST00000565545 EIF3GO75821 320 aaKnown RBP eCLIP14.68□□□□□ -0.06
CSPG4P13-201ENST00000565545 USF2Q15853 346 aaPredicted RBP14.68□□□□□ -0.06
CSPG4P13-201ENST00000565545 EIF5A2Q9GZV4 153 aaKnown RBP14.68□□□□□ -0.06
CSPG4P13-201ENST00000565545 GNG13Q9P2W3 67 aa14.68□□□□□ -0.06
CSPG4P13-201ENST00000565545 CLPSL1A2RUU4 121 aa14.67□□□□□ -0.06
CSPG4P13-201ENST00000565545 OR7C2O60412 319 aa14.67□□□□□ -0.06
CSPG4P13-201ENST00000565545 NDUFS6O75380 124 aaKnown RBP14.67□□□□□ -0.06
CSPG4P13-201ENST00000565545 CD5P06127 495 aa14.67□□□□□ -0.06
CSPG4P13-201ENST00000565545 ZNF506Q5JVG8 444 aa14.67□□□□□ -0.06
CSPG4P13-201ENST00000565545 IQCF2Q8IXL9 164 aa14.67□□□□□ -0.06
CSPG4P13-201ENST00000565545 SUN5Q8TC36 379 aa14.67□□□□□ -0.06
CSPG4P13-201ENST00000565545 SCRT1Q9BWW7 348 aa14.67□□□□□ -0.06
CSPG4P13-201ENST00000565545 TMPRSS5Q9H3S3 457 aa14.67□□□□□ -0.06
CSPG4P13-201ENST00000565545 TMEM14CQ9P0S9 112 aa14.67□□□□□ -0.06
CSPG4P13-201ENST00000565545 ARL2-SNX15V9GYD0 113 aa14.67□□□□□ -0.06
CSPG4P13-201ENST00000565545 TRAV5A0A0B4J249 113 aa14.66□□□□□ -0.06
CSPG4P13-201ENST00000565545 A0A1B0GUS0 222 aa14.66□□□□□ -0.06
CSPG4P13-201ENST00000565545 LOC102723971A0A1B0GUV8 181 aa14.66□□□□□ -0.06
CSPG4P13-201ENST00000565545 TRBV12-3P01733 135 aa14.66□□□□□ -0.06
CSPG4P13-201ENST00000565545 BCL2P10415 239 aa14.66□□□□□ -0.06
CSPG4P13-201ENST00000565545 TOR2AQ5JU69 321 aa14.66□□□□□ -0.06
CSPG4P13-201ENST00000565545 MORN5Q5VZ52 161 aa14.66□□□□□ -0.06
CSPG4P13-201ENST00000565545 GPHB5Q86YW7 130 aa14.66□□□□□ -0.06
CSPG4P13-201ENST00000565545 METTL26Q96S19 204 aa14.66□□□□□ -0.06
CSPG4P13-201ENST00000565545 TXNDC17Q9BRA2 123 aa14.66□□□□□ -0.06
CSPG4P13-201ENST00000565545 PAXXQ9BUH6 204 aa14.66□□□□□ -0.06
CSPG4P13-201ENST00000565545 OR51M1Q9H341 326 aa14.66□□□□□ -0.06
CSPG4P13-201ENST00000565545 TGP01266 2768 aa14.65□□□□□ -0.06
CSPG4P13-201ENST00000565545 ZNF98A6NK75 572 aa14.65□□□□□ -0.06
CSPG4P13-201ENST00000565545 HSPB1P04792 205 aaKnown RBP14.65□□□□□ -0.06
CSPG4P13-201ENST00000565545 S100A1P23297 94 aa14.65□□□□□ -0.06
CSPG4P13-201ENST00000565545 HAGHQ16775 308 aa14.65□□□□□ -0.06
CSPG4P13-201ENST00000565545 FAM106AQ4KMX7 169 aa14.65□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms