RNA–Protein interactions for RNA: ENST00000565274.5

CAPN3-214, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 734 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-214ENST00000565274 TMEM183BQ1AE95 376 aa4.14□□□□□ -1.75
CAPN3-214ENST00000565274 Q6P435 159 aa4.14□□□□□ -1.75
CAPN3-214ENST00000565274 Q8IYB0 196 aa4.14□□□□□ -1.75
CAPN3-214ENST00000565274 OR1L1Q8NH94 360 aa4.14□□□□□ -1.75
CAPN3-214ENST00000565274 MRPL30Q8TCC3 161 aaKnown RBP4.14□□□□□ -1.75
CAPN3-214ENST00000565274 SSMEM1Q8WWF3 244 aa4.14□□□□□ -1.75
CAPN3-214ENST00000565274 PLEKHB2Q96CS7 222 aa4.14□□□□□ -1.75
CAPN3-214ENST00000565274 WDYHV1Q96HA8 205 aa4.14□□□□□ -1.75
CAPN3-214ENST00000565274 FOXC2Q99958 501 aa4.14□□□□□ -1.75
CAPN3-214ENST00000565274 VAMP8Q9BV40 100 aa4.14□□□□□ -1.75
CAPN3-214ENST00000565274 PARLQ9H300 379 aa4.14□□□□□ -1.75
CAPN3-214ENST00000565274 MDFICQ9P1T7 246 aa4.14□□□□□ -1.75
CAPN3-214ENST00000565274 YTHDF2Q9Y5A9 579 aaKnown RBP4.14□□□□□ -1.75
CAPN3-214ENST00000565274 UNC80Q8N2C7 3258 aa4.14□□□□□ -1.75
CAPN3-214ENST00000565274 TNRC6AQ8NDV7 1962 aaKnown RBP4.14□□□□□ -1.75
CAPN3-214ENST00000565274 EYSQ5T1H1 3165 aa4.14□□□□□ -1.75
CAPN3-214ENST00000565274 RTTNQ86VV8 2226 aa4.13□□□□□ -1.75
CAPN3-214ENST00000565274 CD300LBA8K4G0 201 aa4.13□□□□□ -1.75
CAPN3-214ENST00000565274 FNDC10F2Z333 226 aa4.13□□□□□ -1.75
CAPN3-214ENST00000565274 H3BP45 60 aa4.13□□□□□ -1.75
CAPN3-214ENST00000565274 HSPB6O14558 160 aa4.13□□□□□ -1.75
CAPN3-214ENST00000565274 NPFFO15130 113 aa4.13□□□□□ -1.75
CAPN3-214ENST00000565274 SPINT2O43291 252 aa4.13□□□□□ -1.75
CAPN3-214ENST00000565274 SYNGR2O43760 224 aa4.13□□□□□ -1.75
CAPN3-214ENST00000565274 YPEL1O60688 119 aa4.13□□□□□ -1.75
CAPN3-214ENST00000565274 ZNF737O75373 536 aa4.13□□□□□ -1.75
CAPN3-214ENST00000565274 NEURL1O76050 574 aa4.13□□□□□ -1.75
CAPN3-214ENST00000565274 CD55P08174 381 aa4.13□□□□□ -1.75
CAPN3-214ENST00000565274 P0C879 139 aa4.13□□□□□ -1.75
CAPN3-214ENST00000565274 PATE4P0C8F1 98 aa4.13□□□□□ -1.75
CAPN3-214ENST00000565274 SRD5A1P18405 259 aa4.13□□□□□ -1.75
CAPN3-214ENST00000565274 GPR183P32249 361 aa4.13□□□□□ -1.75
CAPN3-214ENST00000565274 PSMB3P49720 205 aa4.13□□□□□ -1.75
CAPN3-214ENST00000565274 UBE2E1P51965 193 aa4.13□□□□□ -1.75
CAPN3-214ENST00000565274 YPEL3P61236 119 aaPredicted RBP4.13□□□□□ -1.75
CAPN3-214ENST00000565274 PPP1CBP62140 327 aa4.13□□□□□ -1.75
CAPN3-214ENST00000565274 ARL16Q0P5N6 197 aa4.13□□□□□ -1.75
CAPN3-214ENST00000565274 KLF5Q13887 457 aaPredicted RBP4.13□□□□□ -1.75
CAPN3-214ENST00000565274 ZNF146Q15072 292 aa4.13□□□□□ -1.75
CAPN3-214ENST00000565274 OR1C1Q15619 314 aa4.13□□□□□ -1.75
CAPN3-214ENST00000565274 MEIG1Q5JSS6 88 aa4.13□□□□□ -1.75
CAPN3-214ENST00000565274 ZNF497Q6ZNH5 498 aa4.13□□□□□ -1.75
CAPN3-214ENST00000565274 Q71RC1 249 aaPredicted RBP4.13□□□□□ -1.75
CAPN3-214ENST00000565274 VKORC1L1Q8N0U8 176 aa4.13□□□□□ -1.75
CAPN3-214ENST00000565274 DEFB125Q8N687 156 aa4.13□□□□□ -1.75
CAPN3-214ENST00000565274 THAP8Q8NA92 274 aa4.13□□□□□ -1.75
CAPN3-214ENST00000565274 OR11H6Q8NGC7 330 aa4.13□□□□□ -1.75
CAPN3-214ENST00000565274 OR2T10Q8NGZ9 312 aa4.13□□□□□ -1.75
CAPN3-214ENST00000565274 CT55Q8WUE5 264 aa4.13□□□□□ -1.75
CAPN3-214ENST00000565274 TAF15Q92804 592 aaKnown RBP eCLIP4.13□□□□□ -1.75
CAPN3-214ENST00000565274 BORCS7Q96B45 105 aa4.13□□□□□ -1.75
CAPN3-214ENST00000565274 UBE2E2Q96LR5 201 aa4.13□□□□□ -1.75
CAPN3-214ENST00000565274 C9orf85Q96MD7 179 aa4.13□□□□□ -1.75
CAPN3-214ENST00000565274 YPEL2Q96QA6 119 aa4.13□□□□□ -1.75
CAPN3-214ENST00000565274 SFXN3Q9BWM7 321 aa4.13□□□□□ -1.75
CAPN3-214ENST00000565274 GGTLC1Q9BX51 225 aa4.13□□□□□ -1.75
CAPN3-214ENST00000565274 PRRG4Q9BZD6 226 aa4.13□□□□□ -1.75
CAPN3-214ENST00000565274 CXXC4Q9H2H0 198 aa4.13□□□□□ -1.75
CAPN3-214ENST00000565274 JPT2Q9H910 190 aa4.13□□□□□ -1.75
CAPN3-214ENST00000565274 EDA2RQ9HAV5 297 aa4.13□□□□□ -1.75
CAPN3-214ENST00000565274 CCL28Q9NRJ3 127 aa4.13□□□□□ -1.75
CAPN3-214ENST00000565274 PSENENQ9NZ42 101 aa4.13□□□□□ -1.75
CAPN3-214ENST00000565274 FUT9Q9Y231 359 aa4.13□□□□□ -1.75
CAPN3-214ENST00000565274 INSIG2Q9Y5U4 225 aa4.13□□□□□ -1.75
CAPN3-214ENST00000565274 SOX21Q9Y651 276 aaPredicted RBP4.13□□□□□ -1.75
CAPN3-214ENST00000565274 LINC00312Q9Y6C7 94 aa4.13□□□□□ -1.75
CAPN3-214ENST00000565274 PRUNE2Q8WUY3 3088 aa4.13□□□□□ -1.75
CAPN3-214ENST00000565274 MYO7BQ6PIF6 2116 aa4.12□□□□□ -1.75
CAPN3-214ENST00000565274 TRAV9-1A0A075B6T8 112 aa4.12□□□□□ -1.75
CAPN3-214ENST00000565274 IGHV2-26A0A0B4J1V2 119 aa4.12□□□□□ -1.75
CAPN3-214ENST00000565274 UBE2L5PA0A1B0GUS4 154 aa4.12□□□□□ -1.75
CAPN3-214ENST00000565274 TEX48A0A1B0GUV7 120 aa4.12□□□□□ -1.75
CAPN3-214ENST00000565274 PINLYPA6NC86 204 aa4.12□□□□□ -1.75
CAPN3-214ENST00000565274 VWC2LB2RUY7 222 aa4.12□□□□□ -1.75
CAPN3-214ENST00000565274 NXPH3O95157 252 aa4.12□□□□□ -1.75
CAPN3-214ENST00000565274 IGKV1D-33P01593 117 aa4.12□□□□□ -1.75
CAPN3-214ENST00000565274 IGKV1-33P01594 117 aa4.12□□□□□ -1.75
CAPN3-214ENST00000565274 IGKV1-39P01597 117 aa4.12□□□□□ -1.75
CAPN3-214ENST00000565274 IGLV2-14P01704 120 aa4.12□□□□□ -1.75
CAPN3-214ENST00000565274 IGKV1D-39P04432 117 aa4.12□□□□□ -1.75
CAPN3-214ENST00000565274 GPX1P07203 203 aa4.12□□□□□ -1.75
CAPN3-214ENST00000565274 LGALS1P09382 135 aaKnown RBP4.12□□□□□ -1.75
CAPN3-214ENST00000565274 IGLC6P0CF74 106 aa4.12□□□□□ -1.75
CAPN3-214ENST00000565274 IAPPP10997 89 aa4.12□□□□□ -1.75
CAPN3-214ENST00000565274 IL3RAP26951 378 aa4.12□□□□□ -1.75
CAPN3-214ENST00000565274 CTRLP40313 264 aa4.12□□□□□ -1.75
CAPN3-214ENST00000565274 HNRNPA3P51991 378 aaKnown RBP4.12□□□□□ -1.75
CAPN3-214ENST00000565274 RPS18P62269 152 aaKnown RBP4.12□□□□□ -1.75
CAPN3-214ENST00000565274 EIF4EBP1Q13541 118 aaPredicted RBP4.12□□□□□ -1.75
CAPN3-214ENST00000565274 KRTAP15-1Q3LI76 137 aa4.12□□□□□ -1.75
CAPN3-214ENST00000565274 TMEM14EPQ6UXP3 125 aa4.12□□□□□ -1.75
CAPN3-214ENST00000565274 C1orf174Q8IYL3 243 aa4.12□□□□□ -1.75
CAPN3-214ENST00000565274 BCL6BQ8N143 479 aaPredicted RBP4.12□□□□□ -1.75
CAPN3-214ENST00000565274 ZCCHC24Q8N2G6 241 aaKnown RBP4.12□□□□□ -1.75
CAPN3-214ENST00000565274 OR4B1Q8NGF8 309 aa4.12□□□□□ -1.75
CAPN3-214ENST00000565274 DDB2Q92466 427 aa4.12□□□□□ -1.75
CAPN3-214ENST00000565274 CARD19Q96LW7 228 aa4.12□□□□□ -1.75
CAPN3-214ENST00000565274 TMEM147Q9BVK8 224 aa4.12□□□□□ -1.75
CAPN3-214ENST00000565274 TMEM9BQ9NQ34 198 aa4.12□□□□□ -1.75
CAPN3-214ENST00000565274 SLC39A9Q9NUM3 307 aa4.12□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms