RNA–Protein interactions for RNA: ENST00000563455.1

SMPD3-205, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

TSL 4

Gene SMPD3, Length 546 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-205ENST00000563455 MIR17HGQ75NE6 70 aa10.86□□□□□ -0.67
SMPD3-205ENST00000563455 OR1B1Q8NGR6 318 aa10.86□□□□□ -0.67
SMPD3-205ENST00000563455 PAXXQ9BUH6 204 aa10.86□□□□□ -0.67
SMPD3-205ENST00000563455 SMCO4Q9NRQ5 59 aa10.86□□□□□ -0.67
SMPD3-205ENST00000563455 ZNF355PQ9NSJ1 428 aa10.86□□□□□ -0.67
SMPD3-205ENST00000563455 MRPL27Q9P0M9 148 aaKnown RBP10.86□□□□□ -0.67
SMPD3-205ENST00000563455 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP10.85□□□□□ -0.67
SMPD3-205ENST00000563455 WI2-2373I1.2A0A1W2PRP0 233 aa10.85□□□□□ -0.67
SMPD3-205ENST00000563455 FAM74A7A6NL05 159 aa10.85□□□□□ -0.67
SMPD3-205ENST00000563455 H3BQ15 152 aa10.85□□□□□ -0.67
SMPD3-205ENST00000563455 M0R036 132 aa10.85□□□□□ -0.67
SMPD3-205ENST00000563455 AMY1AP04745 511 aa10.85□□□□□ -0.67
SMPD3-205ENST00000563455 ORM2P19652 201 aa10.85□□□□□ -0.67
SMPD3-205ENST00000563455 GATA2P23769 480 aaPredicted RBP10.85□□□□□ -0.67
SMPD3-205ENST00000563455 RHOGP84095 191 aa10.85□□□□□ -0.67
SMPD3-205ENST00000563455 RELQ04864 619 aaPredicted RBP10.85□□□□□ -0.67
SMPD3-205ENST00000563455 DEFB112Q30KQ8 113 aa10.85□□□□□ -0.67
SMPD3-205ENST00000563455 FAM90A2PQ658T7 463 aa10.85□□□□□ -0.67
SMPD3-205ENST00000563455 ZNF600Q6ZNG1 722 aa10.85□□□□□ -0.67
SMPD3-205ENST00000563455 OR5AU1Q8NGC0 362 aa10.85□□□□□ -0.67
SMPD3-205ENST00000563455 ZNF502Q8TBZ5 544 aa10.85□□□□□ -0.67
SMPD3-205ENST00000563455 RNF125Q96EQ8 232 aa10.85□□□□□ -0.67
SMPD3-205ENST00000563455 SMIM7Q9BQ49 75 aa10.85□□□□□ -0.67
SMPD3-205ENST00000563455 CTDSP1Q9GZU7 261 aa10.85□□□□□ -0.67
SMPD3-205ENST00000563455 TMPRSS5Q9H3S3 457 aa10.85□□□□□ -0.67
SMPD3-205ENST00000563455 MRPL36Q9P0J6 103 aaKnown RBP10.85□□□□□ -0.67
SMPD3-205ENST00000563455 VPREB3Q9UKI3 123 aa10.85□□□□□ -0.67
SMPD3-205ENST00000563455 LY96Q9Y6Y9 160 aa10.85□□□□□ -0.67
SMPD3-205ENST00000563455 BMPR1BO00238 502 aa10.84□□□□□ -0.67
SMPD3-205ENST00000563455 OR2J3O76001 311 aa10.84□□□□□ -0.67
SMPD3-205ENST00000563455 S100A9P06702 114 aaKnown RBP10.84□□□□□ -0.67
SMPD3-205ENST00000563455 UBE2L3P68036 154 aaKnown RBP10.84□□□□□ -0.67
SMPD3-205ENST00000563455 C15orf32Q32M92 178 aa10.84□□□□□ -0.67
SMPD3-205ENST00000563455 TIGITQ495A1 244 aa10.84□□□□□ -0.67
SMPD3-205ENST00000563455 FBLN7Q53RD9 439 aa10.84□□□□□ -0.67
SMPD3-205ENST00000563455 PATE2Q6UY27 113 aa10.84□□□□□ -0.67
SMPD3-205ENST00000563455 TMEM219Q86XT9 240 aa10.84□□□□□ -0.67
SMPD3-205ENST00000563455 BPIFA4PQ86YQ2 179 aa10.84□□□□□ -0.67
SMPD3-205ENST00000563455 LYPD1Q8N2G4 141 aa10.84□□□□□ -0.67
SMPD3-205ENST00000563455 ARL6IP6Q8N6S5 226 aa10.84□□□□□ -0.67
SMPD3-205ENST00000563455 C11orf52Q96A22 123 aa10.84□□□□□ -0.67
SMPD3-205ENST00000563455 FAM167A-AS1Q96KT0 104 aa10.84□□□□□ -0.67
SMPD3-205ENST00000563455 GPR82Q96P67 336 aa10.84□□□□□ -0.67
SMPD3-205ENST00000563455 PRSS22Q9GZN4 317 aa10.84□□□□□ -0.67
SMPD3-205ENST00000563455 NPFFR1Q9GZQ6 430 aa10.84□□□□□ -0.67
SMPD3-205ENST00000563455 MEOX2P50222 304 aa10.83□□□□□ -0.68
SMPD3-205ENST00000563455 LYZP61626 148 aa10.83□□□□□ -0.68
SMPD3-205ENST00000563455 BTN1A1Q13410 526 aa10.83□□□□□ -0.68
SMPD3-205ENST00000563455 C9orf152Q5JTZ5 239 aa10.83□□□□□ -0.68
SMPD3-205ENST00000563455 ZNF491Q8N8L2 437 aa10.83□□□□□ -0.68
SMPD3-205ENST00000563455 HIST1H2BAQ96A08 127 aa10.83□□□□□ -0.68
SMPD3-205ENST00000563455 SHANK2-AS3Q9BTD1 123 aa10.83□□□□□ -0.68
SMPD3-205ENST00000563455 SLC25A2Q9BXI2 301 aa10.83□□□□□ -0.68
SMPD3-205ENST00000563455 SLC25A39Q9BZJ4 359 aaPredicted RBP10.83□□□□□ -0.68
SMPD3-205ENST00000563455 SDF2L1Q9HCN8 221 aa10.83□□□□□ -0.68
SMPD3-205ENST00000563455 PUS1Q9Y606 427 aaKnown RBP eCLIP10.83□□□□□ -0.68
SMPD3-205ENST00000563455 C7orf77A4D0Y5 90 aa10.82□□□□□ -0.68
SMPD3-205ENST00000563455 C9JCJ5 164 aa10.82□□□□□ -0.68
SMPD3-205ENST00000563455 IGHV3-48P01763 117 aa10.82□□□□□ -0.68
SMPD3-205ENST00000563455 MT-ND4LP03901 98 aa10.82□□□□□ -0.68
SMPD3-205ENST00000563455 CTSGP08311 255 aa10.82□□□□□ -0.68
SMPD3-205ENST00000563455 HIST1H1EP10412 219 aaKnown RBP10.82□□□□□ -0.68
SMPD3-205ENST00000563455 PPIFP30405 207 aaKnown RBP10.82□□□□□ -0.68
SMPD3-205ENST00000563455 CEBPGP53567 150 aa10.82□□□□□ -0.68
SMPD3-205ENST00000563455 SLC35B1P78383 322 aa10.82□□□□□ -0.68
SMPD3-205ENST00000563455 PDE6HQ13956 83 aa10.82□□□□□ -0.68
SMPD3-205ENST00000563455 LY6EQ16553 131 aa10.82□□□□□ -0.68
SMPD3-205ENST00000563455 AWAT1Q58HT5 328 aa10.82□□□□□ -0.68
SMPD3-205ENST00000563455 SPATA31B1PQ5VZV4 182 aa10.82□□□□□ -0.68
SMPD3-205ENST00000563455 OR4F17Q8NGA8 305 aa10.82□□□□□ -0.68
SMPD3-205ENST00000563455 BTF3L4Q96K17 158 aa10.82□□□□□ -0.68
SMPD3-205ENST00000563455 RPS10P5Q9NQ39 176 aa10.82□□□□□ -0.68
SMPD3-205ENST00000563455 IGHV3-21A0A0B4J1V1 117 aa10.81□□□□□ -0.68
SMPD3-205ENST00000563455 PPP1R2P9O14990 202 aa10.81□□□□□ -0.68
SMPD3-205ENST00000563455 NBEAP1P0C6P0 100 aa10.81□□□□□ -0.68
SMPD3-205ENST00000563455 RPL7P18124 248 aaKnown RBP10.81□□□□□ -0.68
SMPD3-205ENST00000563455 RPL15P61313 204 aaKnown RBP10.81□□□□□ -0.68
SMPD3-205ENST00000563455 SRSF2Q01130 221 aaKnown RBP10.81□□□□□ -0.68
SMPD3-205ENST00000563455 C1orf194Q5T5A4 169 aa10.81□□□□□ -0.68
SMPD3-205ENST00000563455 C3orf56Q8N813 242 aa10.81□□□□□ -0.68
SMPD3-205ENST00000563455 C15orf54Q8N8G6 183 aa10.81□□□□□ -0.68
SMPD3-205ENST00000563455 ANAPC16Q96DE5 110 aa10.81□□□□□ -0.68
SMPD3-205ENST00000563455 SMIM12Q96EX1 92 aa10.81□□□□□ -0.68
SMPD3-205ENST00000563455 PARLQ9H300 379 aa10.81□□□□□ -0.68
SMPD3-205ENST00000563455 TGOLN2O43493 480 aa10.8□□□□□ -0.68
SMPD3-205ENST00000563455 IGLV1-40P01703 118 aa10.8□□□□□ -0.68
SMPD3-205ENST00000563455 IGHV4-59P01825 116 aa10.8□□□□□ -0.68
SMPD3-205ENST00000563455 TRGV3P03979 118 aa10.8□□□□□ -0.68
SMPD3-205ENST00000563455 IL4P05112 153 aa10.8□□□□□ -0.68
SMPD3-205ENST00000563455 TAS2R60P59551 318 aa10.8□□□□□ -0.68
SMPD3-205ENST00000563455 HILS1P60008 231 aa10.8□□□□□ -0.68
SMPD3-205ENST00000563455 ZNF343Q6P1L6 599 aa10.8□□□□□ -0.68
SMPD3-205ENST00000563455 C19orf35Q6ZS72 473 aa10.8□□□□□ -0.68
SMPD3-205ENST00000563455 ZNF503Q96F45 646 aa10.8□□□□□ -0.68
SMPD3-205ENST00000563455 RABAC1Q9UI14 185 aa10.8□□□□□ -0.68
SMPD3-205ENST00000563455 CUBNO60494 3623 aa10.79□□□□□ -0.68
SMPD3-205ENST00000563455 HELTA6NFD8 242 aa10.79□□□□□ -0.68
SMPD3-205ENST00000563455 FBLL1A6NHQ2 334 aaKnown RBP10.79□□□□□ -0.68
SMPD3-205ENST00000563455 F8W735 103 aaPredicted RBP10.79□□□□□ -0.68
SMPD3-205ENST00000563455 G3V318 75 aa10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms