RNA–Protein interactions for RNA: ENST00000563112.1

CLK3-210, Transcript of CDC like kinase 3, humanhuman

TSL 3

Gene CLK3, Length 665 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-210ENST00000563112 BTCP35070 178 aa12.25□□□□□ -0.45
CLK3-210ENST00000563112 SAMD13Q5VXD3 122 aa12.25□□□□□ -0.45
CLK3-210ENST00000563112 ACOT7LQ6ZUV0 252 aa12.25□□□□□ -0.45
CLK3-210ENST00000563112 OR4D5Q8NGN0 318 aa12.25□□□□□ -0.45
CLK3-210ENST00000563112 CLEC5AQ9NY25 188 aa12.25□□□□□ -0.45
CLK3-210ENST00000563112 TBC1D24Q9ULP9 559 aa12.25□□□□□ -0.45
CLK3-210ENST00000563112 SLC45A2Q9UMX9 530 aa12.25□□□□□ -0.45
CLK3-210ENST00000563112 HYDINQ4G0P3 5121 aa12.24□□□□□ -0.45
CLK3-210ENST00000563112 IGHV4-28A0A0C4DH34 117 aa12.24□□□□□ -0.45
CLK3-210ENST00000563112 ZNF705EA8MWA4 302 aaPredicted RBP12.24□□□□□ -0.45
CLK3-210ENST00000563112 SSSCA1O60232 199 aa12.24□□□□□ -0.45
CLK3-210ENST00000563112 SCGB1D2O95969 90 aa12.24□□□□□ -0.45
CLK3-210ENST00000563112 HLA-DRB4P13762 266 aa12.24□□□□□ -0.45
CLK3-210ENST00000563112 GALR1P47211 349 aa12.24□□□□□ -0.45
CLK3-210ENST00000563112 PSMB3P49720 205 aa12.24□□□□□ -0.45
CLK3-210ENST00000563112 IAH1Q2TAA2 248 aaPredicted RBP12.24□□□□□ -0.45
CLK3-210ENST00000563112 TMEM144Q7Z5S9 345 aa12.24□□□□□ -0.45
CLK3-210ENST00000563112 Q8NAQ8 132 aa12.24□□□□□ -0.45
CLK3-210ENST00000563112 SMIM8Q96KF7 97 aa12.24□□□□□ -0.45
CLK3-210ENST00000563112 HLA-DRB4X5D2U9 266 aa12.24□□□□□ -0.45
CLK3-210ENST00000563112 LYRM1O43325 122 aa12.23□□□□□ -0.45
CLK3-210ENST00000563112 ORM2P19652 201 aa12.23□□□□□ -0.45
CLK3-210ENST00000563112 MEOX2P50222 304 aa12.23□□□□□ -0.45
CLK3-210ENST00000563112 CSNK1G2-AS1Q8NCQ2 148 aa12.23□□□□□ -0.45
CLK3-210ENST00000563112 MITD1Q8WV92 249 aa12.23□□□□□ -0.45
CLK3-210ENST00000563112 TMEM147Q9BVK8 224 aa12.23□□□□□ -0.45
CLK3-210ENST00000563112 WDR12Q9GZL7 423 aaKnown RBP12.23□□□□□ -0.45
CLK3-210ENST00000563112 HRH4Q9H3N8 390 aa12.23□□□□□ -0.45
CLK3-210ENST00000563112 SLC25A22Q9H936 323 aa12.23□□□□□ -0.45
CLK3-210ENST00000563112 GSKIPQ9P0R6 139 aa12.23□□□□□ -0.45
CLK3-210ENST00000563112 XCL2Q9UBD3 114 aa12.23□□□□□ -0.45
CLK3-210ENST00000563112 ZNF98A6NK75 572 aa12.22□□□□□ -0.45
CLK3-210ENST00000563112 ISLRO14498 428 aa12.22□□□□□ -0.45
CLK3-210ENST00000563112 IL5P05113 134 aa12.22□□□□□ -0.45
CLK3-210ENST00000563112 RBMY1A1P0DJD3 496 aaKnown RBP12.22□□□□□ -0.45
CLK3-210ENST00000563112 RBMY1CP0DJD4 496 aa12.22□□□□□ -0.45
CLK3-210ENST00000563112 GATA2P23769 480 aaPredicted RBP12.22□□□□□ -0.45
CLK3-210ENST00000563112 RBMY1FQ15415 496 aaKnown RBP12.22□□□□□ -0.45
CLK3-210ENST00000563112 SPATA31B1PQ5VZV4 182 aa12.22□□□□□ -0.45
CLK3-210ENST00000563112 EBLN2Q6P2I7 272 aa12.22□□□□□ -0.45
CLK3-210ENST00000563112 FOXI2Q6ZQN5 318 aa12.22□□□□□ -0.45
CLK3-210ENST00000563112 OR1B1Q8NGR6 318 aa12.22□□□□□ -0.45
CLK3-210ENST00000563112 C2CD4CQ8TF44 421 aa12.22□□□□□ -0.45
CLK3-210ENST00000563112 GPR82Q96P67 336 aa12.22□□□□□ -0.45
CLK3-210ENST00000563112 C20orf85Q9H1P6 137 aa12.22□□□□□ -0.45
CLK3-210ENST00000563112 SAV1Q9H4B6 383 aaPredicted RBP12.22□□□□□ -0.45
CLK3-210ENST00000563112 X6R8D5 127 aa12.22□□□□□ -0.45
CLK3-210ENST00000563112 C11orf94C9JXX5 98 aa12.21□□□□□ -0.45
CLK3-210ENST00000563112 PLA2G10O15496 165 aa12.21□□□□□ -0.45
CLK3-210ENST00000563112 ZNF846Q147U1 533 aa12.21□□□□□ -0.45
CLK3-210ENST00000563112 ZBTB8BQ8NAP8 495 aaPredicted RBP12.21□□□□□ -0.45
CLK3-210ENST00000563112 C16orf92Q96LL3 132 aa12.21□□□□□ -0.45
CLK3-210ENST00000563112 MGAT4CQ9UBM8 478 aa12.21□□□□□ -0.45
CLK3-210ENST00000563112 SOCS3O14543 225 aa12.2□□□□□ -0.46
CLK3-210ENST00000563112 IGKV3-20P01619 116 aa12.2□□□□□ -0.46
CLK3-210ENST00000563112 TCRBP04435 133 aa12.2□□□□□ -0.46
CLK3-210ENST00000563112 TCTAP57738 103 aa12.2□□□□□ -0.46
CLK3-210ENST00000563112 TAS2R30P59541 319 aa12.2□□□□□ -0.46
CLK3-210ENST00000563112 RAP2BP61225 183 aa12.2□□□□□ -0.46
CLK3-210ENST00000563112 SELENOTP62341 195 aa12.2□□□□□ -0.46
CLK3-210ENST00000563112 DLK1P80370 383 aa12.2□□□□□ -0.46
CLK3-210ENST00000563112 TMEM14EPQ6UXP3 125 aa12.2□□□□□ -0.46
CLK3-210ENST00000563112 CYP2G1PQ6ZSU1 146 aa12.2□□□□□ -0.46
CLK3-210ENST00000563112 S100A7AQ86SG5 101 aa12.2□□□□□ -0.46
CLK3-210ENST00000563112 OR10P1Q8NGE3 313 aa12.2□□□□□ -0.46
CLK3-210ENST00000563112 OR4B1Q8NGF8 309 aa12.2□□□□□ -0.46
CLK3-210ENST00000563112 RSG1Q9BU20 258 aa12.2□□□□□ -0.46
CLK3-210ENST00000563112 SLC25A32Q9H2D1 315 aa12.2□□□□□ -0.46
CLK3-210ENST00000563112 NPVFQ9HCQ7 196 aa12.2□□□□□ -0.46
CLK3-210ENST00000563112 RPRMQ9NS64 109 aa12.2□□□□□ -0.46
CLK3-210ENST00000563112 PMS2P5A8MQ11 134 aa12.19□□□□□ -0.46
CLK3-210ENST00000563112 FNDC10F2Z333 226 aa12.19□□□□□ -0.46
CLK3-210ENST00000563112 TSC22D2O75157 780 aa12.19□□□□□ -0.46
CLK3-210ENST00000563112 METTL15P1P0C7V9 234 aa12.19□□□□□ -0.46
CLK3-210ENST00000563112 HLA-DMBP28068 263 aa12.19□□□□□ -0.46
CLK3-210ENST00000563112 PAX9P55771 341 aa12.19□□□□□ -0.46
CLK3-210ENST00000563112 RRAS2P62070 204 aaPredicted RBP12.19□□□□□ -0.46
CLK3-210ENST00000563112 GDF5OSQ5U4N7 250 aa12.19□□□□□ -0.46
CLK3-210ENST00000563112 TMEM182Q6ZP80 229 aaPredicted RBP12.19□□□□□ -0.46
CLK3-210ENST00000563112 S100ZQ8WXG8 99 aa12.19□□□□□ -0.46
CLK3-210ENST00000563112 CLUHP3Q96NS8 147 aa12.19□□□□□ -0.46
CLK3-210ENST00000563112 CCDC32Q9BV29 185 aa12.19□□□□□ -0.46
CLK3-210ENST00000563112 TRAV6A0A075B6T7 132 aa12.18□□□□□ -0.46
CLK3-210ENST00000563112 L7N2F9 121 aa12.18□□□□□ -0.46
CLK3-210ENST00000563112 HYPMO75409 117 aa12.18□□□□□ -0.46
CLK3-210ENST00000563112 DEFB1P60022 68 aa12.18□□□□□ -0.46
CLK3-210ENST00000563112 VAMP2P63027 116 aa12.18□□□□□ -0.46
CLK3-210ENST00000563112 LGALS9CQ6DKI2 356 aa12.18□□□□□ -0.46
CLK3-210ENST00000563112 DOK5Q9P104 306 aa12.18□□□□□ -0.46
CLK3-210ENST00000563112 HIGD1AQ9Y241 93 aa12.18□□□□□ -0.46
CLK3-210ENST00000563112 EPPK1P58107 5090 aaKnown RBP12.17□□□□□ -0.46
CLK3-210ENST00000563112 ELOA3CA0A087WX78 387 aaPredicted RBP12.17□□□□□ -0.46
CLK3-210ENST00000563112 TRAV10A0A0B4J240 114 aa12.17□□□□□ -0.46
CLK3-210ENST00000563112 FAM25EA8MYX2 175 aa12.17□□□□□ -0.46
CLK3-210ENST00000563112 CCNKO75909 580 aa12.17□□□□□ -0.46
CLK3-210ENST00000563112 MBPP02686 304 aaPredicted RBP12.17□□□□□ -0.46
CLK3-210ENST00000563112 OR5G3P0C626 314 aa12.17□□□□□ -0.46
CLK3-210ENST00000563112 LINC00869P0C866 280 aa12.17□□□□□ -0.46
CLK3-210ENST00000563112 FXYD7P58549 80 aa12.17□□□□□ -0.46
CLK3-210ENST00000563112 PSG9Q00887 426 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 60.9 ms