RNA–Protein interactions for RNA: ENST00000562609.2

GTF3C1-203, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 5

Gene GTF3C1, Length 2,824 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-203ENST00000562609 PKDREJQ9NTG1 2253 aa11.34□□□□□ -0.59
GTF3C1-203ENST00000562609 CEACAM4O75871 244 aa11.33□□□□□ -0.6
GTF3C1-203ENST00000562609 IGKV3-15P01624 115 aa11.33□□□□□ -0.6
GTF3C1-203ENST00000562609 TAS2R45P59539 299 aa11.33□□□□□ -0.6
GTF3C1-203ENST00000562609 ETDBQ3ZM63 59 aa11.33□□□□□ -0.6
GTF3C1-203ENST00000562609 ASCL5Q7RTU5 278 aa11.33□□□□□ -0.6
GTF3C1-203ENST00000562609 SGK494Q96LW2 274 aa11.33□□□□□ -0.6
GTF3C1-203ENST00000562609 C18orf15Q96N68 181 aa11.33□□□□□ -0.6
GTF3C1-203ENST00000562609 PROCRQ9UNN8 238 aa11.33□□□□□ -0.6
GTF3C1-203ENST00000562609 TCF19Q9Y242 345 aa11.33□□□□□ -0.6
GTF3C1-203ENST00000562609 POLEQ07864 2286 aa11.33□□□□□ -0.6
GTF3C1-203ENST00000562609 PTPRQQ9UMZ3 2332 aa11.33□□□□□ -0.6
GTF3C1-203ENST00000562609 TEX50A0A1B0GTY4 177 aa11.32□□□□□ -0.6
GTF3C1-203ENST00000562609 A8MWL6 223 aa11.32□□□□□ -0.6
GTF3C1-203ENST00000562609 MGST3O14880 152 aa11.32□□□□□ -0.6
GTF3C1-203ENST00000562609 UBE2L3P68036 154 aaKnown RBP11.32□□□□□ -0.6
GTF3C1-203ENST00000562609 MRPL16Q9NX20 251 aaKnown RBP11.32□□□□□ -0.6
GTF3C1-203ENST00000562609 KBTBD11-OT1A0A1B0GTJ5 212 aa11.32□□□□□ -0.6
GTF3C1-203ENST00000562609 CHEK1O14757 476 aa11.32□□□□□ -0.6
GTF3C1-203ENST00000562609 TIMM8AO60220 97 aaPredicted RBP11.32□□□□□ -0.6
GTF3C1-203ENST00000562609 GATA3P23771 443 aa11.32□□□□□ -0.6
GTF3C1-203ENST00000562609 MOB3BQ86TA1 216 aa11.32□□□□□ -0.6
GTF3C1-203ENST00000562609 OR8A1Q8NGG7 326 aa11.32□□□□□ -0.6
GTF3C1-203ENST00000562609 Q8TCH9 128 aa11.32□□□□□ -0.6
GTF3C1-203ENST00000562609 ARPC1AQ92747 370 aa11.32□□□□□ -0.6
GTF3C1-203ENST00000562609 DPF1Q92782 380 aa11.32□□□□□ -0.6
GTF3C1-203ENST00000562609 NDFIP1Q9BT67 221 aa11.32□□□□□ -0.6
GTF3C1-203ENST00000562609 PKIBQ9C010 78 aa11.32□□□□□ -0.6
GTF3C1-203ENST00000562609 ZNF71Q9NQZ8 489 aaPredicted RBP11.32□□□□□ -0.6
GTF3C1-203ENST00000562609 SS18L2Q9UHA2 77 aa11.32□□□□□ -0.6
GTF3C1-203ENST00000562609 ATRXP46100 2492 aa11.32□□□□□ -0.6
GTF3C1-203ENST00000562609 TRAV5A0A0B4J249 113 aa11.31□□□□□ -0.6
GTF3C1-203ENST00000562609 K7ERJ3 54 aa11.31□□□□□ -0.6
GTF3C1-203ENST00000562609 PSPNO60542 156 aa11.31□□□□□ -0.6
GTF3C1-203ENST00000562609 GCSHP23434 173 aa11.31□□□□□ -0.6
GTF3C1-203ENST00000562609 DUTP33316 252 aaKnown RBP11.31□□□□□ -0.6
GTF3C1-203ENST00000562609 IGF2-ASQ6U949 168 aa11.31□□□□□ -0.6
GTF3C1-203ENST00000562609 RBMXL3Q8N7X1 1067 aaKnown RBP11.31□□□□□ -0.6
GTF3C1-203ENST00000562609 GTSF1Q8WW33 167 aa11.31□□□□□ -0.6
GTF3C1-203ENST00000562609 COL25A1Q9BXS0 654 aaPredicted RBP11.31□□□□□ -0.6
GTF3C1-203ENST00000562609 AP5S1Q9NUS5 200 aa11.31□□□□□ -0.6
GTF3C1-203ENST00000562609 FAM215AQ9Y5M1 114 aa11.31□□□□□ -0.6
GTF3C1-203ENST00000562609 IGHV1-18A0A0C4DH31 117 aa11.31□□□□□ -0.6
GTF3C1-203ENST00000562609 PEX7O00628 323 aa11.31□□□□□ -0.6
GTF3C1-203ENST00000562609 TSPAN13O95857 204 aa11.31□□□□□ -0.6
GTF3C1-203ENST00000562609 C8orf88P0DMB2 117 aa11.31□□□□□ -0.6
GTF3C1-203ENST00000562609 NMUP48645 174 aa11.31□□□□□ -0.6
GTF3C1-203ENST00000562609 TMEM177Q53S58 311 aa11.31□□□□□ -0.6
GTF3C1-203ENST00000562609 PCP2Q8IVA1 136 aa11.31□□□□□ -0.6
GTF3C1-203ENST00000562609 HCFC1P51610 2035 aa11.31□□□□□ -0.6
GTF3C1-203ENST00000562609 TMEM30CPA0ZSE6 113 aa11.31□□□□□ -0.6
GTF3C1-203ENST00000562609 IQCF6A8MYZ5 107 aa11.31□□□□□ -0.6
GTF3C1-203ENST00000562609 FNDC10F2Z333 226 aa11.31□□□□□ -0.6
GTF3C1-203ENST00000562609 F8W1H4 67 aa11.31□□□□□ -0.6
GTF3C1-203ENST00000562609 SIVA1O15304 175 aa11.31□□□□□ -0.6
GTF3C1-203ENST00000562609 APOHP02749 345 aaPredicted RBP11.31□□□□□ -0.6
GTF3C1-203ENST00000562609 MTURNQ8N3F0 131 aa11.31□□□□□ -0.6
GTF3C1-203ENST00000562609 PIP4P2Q8N4L2 257 aa11.31□□□□□ -0.6
GTF3C1-203ENST00000562609 RFESDQ8TAC1 157 aa11.31□□□□□ -0.6
GTF3C1-203ENST00000562609 TET2Q6N021 2002 aaPredicted RBP11.3□□□□□ -0.6
GTF3C1-203ENST00000562609 NBL1P41271 181 aa11.3□□□□□ -0.6
GTF3C1-203ENST00000562609 INSL3P51460 131 aa11.3□□□□□ -0.6
GTF3C1-203ENST00000562609 ERVK11-1P61568 191 aa11.3□□□□□ -0.6
GTF3C1-203ENST00000562609 ERVK-16P61578 105 aa11.3□□□□□ -0.6
GTF3C1-203ENST00000562609 MSMPQ1L6U9 139 aa11.3□□□□□ -0.6
GTF3C1-203ENST00000562609 MORN5Q5VZ52 161 aa11.3□□□□□ -0.6
GTF3C1-203ENST00000562609 ZNF474Q6S9Z5 364 aaPredicted RBP11.3□□□□□ -0.6
GTF3C1-203ENST00000562609 C22orf34Q6ZV56 151 aa11.3□□□□□ -0.6
GTF3C1-203ENST00000562609 SLC25A33Q9BSK2 321 aa11.3□□□□□ -0.6
GTF3C1-203ENST00000562609 C7orf69Q9H7B7 122 aa11.3□□□□□ -0.6
GTF3C1-203ENST00000562609 CSN1S1P47710 185 aa11.3□□□□□ -0.6
GTF3C1-203ENST00000562609 FXYD2P54710 66 aa11.3□□□□□ -0.6
GTF3C1-203ENST00000562609 C11orf53Q8IXP5 236 aa11.3□□□□□ -0.6
GTF3C1-203ENST00000562609 HINT2Q9BX68 163 aa11.3□□□□□ -0.6
GTF3C1-203ENST00000562609 RPP21Q9H633 154 aaKnown RBP11.3□□□□□ -0.6
GTF3C1-203ENST00000562609 POLDIP2Q9Y2S7 368 aa11.3□□□□□ -0.6
GTF3C1-203ENST00000562609 IGKV1OR2-108A0A075B7D4 117 aa11.29□□□□□ -0.6
GTF3C1-203ENST00000562609 FOXC1Q12948 553 aa11.29□□□□□ -0.6
GTF3C1-203ENST00000562609 Q6ZS92 163 aa11.29□□□□□ -0.6
GTF3C1-203ENST00000562609 GCSAMQ8N6F7 178 aa11.29□□□□□ -0.6
GTF3C1-203ENST00000562609 TMEM140Q9NV12 185 aa11.29□□□□□ -0.6
GTF3C1-203ENST00000562609 METRNQ9UJH8 293 aa11.29□□□□□ -0.6
GTF3C1-203ENST00000562609 OOEPA6NGQ2 149 aa11.29□□□□□ -0.6
GTF3C1-203ENST00000562609 M0R1B8 84 aa11.29□□□□□ -0.6
GTF3C1-203ENST00000562609 GPR12P47775 334 aa11.29□□□□□ -0.6
GTF3C1-203ENST00000562609 GNG5P63218 68 aa11.29□□□□□ -0.6
GTF3C1-203ENST00000562609 CR1LQ2VPA4 569 aa11.29□□□□□ -0.6
GTF3C1-203ENST00000562609 SHISA2Q6UWI4 295 aa11.29□□□□□ -0.6
GTF3C1-203ENST00000562609 PGPEP1Q9NXJ5 209 aa11.29□□□□□ -0.6
GTF3C1-203ENST00000562609 CHD8Q9HCK8 2581 aa11.29□□□□□ -0.6
GTF3C1-203ENST00000562609 A0A1W2PRD5 423 aa11.28□□□□□ -0.6
GTF3C1-203ENST00000562609 A0A1W2PRF3 423 aa11.28□□□□□ -0.6
GTF3C1-203ENST00000562609 A0A1W2PRM7 423 aa11.28□□□□□ -0.6
GTF3C1-203ENST00000562609 FAM90A9PA6NNJ1 464 aa11.28□□□□□ -0.6
GTF3C1-203ENST00000562609 PYYP10082 97 aa11.28□□□□□ -0.6
GTF3C1-203ENST00000562609 SPRNQ5BIV9 151 aa11.28□□□□□ -0.6
GTF3C1-203ENST00000562609 LINC00322Q6ZN03 302 aaPredicted RBP11.28□□□□□ -0.6
GTF3C1-203ENST00000562609 ZNF329Q86UD4 541 aa11.28□□□□□ -0.6
GTF3C1-203ENST00000562609 BCL6BQ8N143 479 aaPredicted RBP11.28□□□□□ -0.6
GTF3C1-203ENST00000562609 ZNF479Q96JC4 524 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms