RNA–Protein interactions for RNA: ENST00000562540.1

DENND4A-205, Transcript of DENN domain containing 4A, humanhuman

TSL 2

Gene DENND4A, Length 629 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DENND4A-205ENST00000562540 TMEM133Q9H2Q1 129 aa0.35□□□□□ -2.35
DENND4A-205ENST00000562540 DOCK4Q8N1I0 1966 aa0.35□□□□□ -2.35
DENND4A-205ENST00000562540 RTL1A6NKG5 1358 aa0.34□□□□□ -2.35
DENND4A-205ENST00000562540 E9PCH4 1651 aa0.34□□□□□ -2.35
DENND4A-205ENST00000562540 IGLV3-32A0A0A0MS00 114 aa0.34□□□□□ -2.36
DENND4A-205ENST00000562540 TCRBP04435 133 aa0.34□□□□□ -2.36
DENND4A-205ENST00000562540 LSM6P62312 80 aaKnown RBP0.34□□□□□ -2.36
DENND4A-205ENST00000562540 SPA17Q15506 151 aa0.34□□□□□ -2.36
DENND4A-205ENST00000562540 PDZD9Q8IXQ8 264 aa0.34□□□□□ -2.36
DENND4A-205ENST00000562540 ARHGEF28Q8N1W1 1705 aaKnown RBP0.34□□□□□ -2.36
DENND4A-205ENST00000562540 STAG3L4Q8TBR4 150 aa0.34□□□□□ -2.36
DENND4A-205ENST00000562540 PPP1R14BQ96C90 147 aa0.34□□□□□ -2.36
DENND4A-205ENST00000562540 YPEL2Q96QA6 119 aa0.34□□□□□ -2.36
DENND4A-205ENST00000562540 LINC00467Q9BRT7 94 aa0.34□□□□□ -2.36
DENND4A-205ENST00000562540 PARVGQ9HBI0 331 aa0.34□□□□□ -2.36
DENND4A-205ENST00000562540 IDI2-AS1Q9NZ38 188 aa0.34□□□□□ -2.36
DENND4A-205ENST00000562540 TNFSF18Q9UNG2 199 aa0.34□□□□□ -2.36
DENND4A-205ENST00000562540 LY96Q9Y6Y9 160 aa0.34□□□□□ -2.36
DENND4A-205ENST00000562540 A8MWV9 139 aa0.33□□□□□ -2.36
DENND4A-205ENST00000562540 IGLV3-1P01715 115 aa0.33□□□□□ -2.36
DENND4A-205ENST00000562540 ERP29P30040 261 aaKnown RBP0.33□□□□□ -2.36
DENND4A-205ENST00000562540 RNASE4P34096 147 aaKnown RBP0.33□□□□□ -2.36
DENND4A-205ENST00000562540 RRN3P1Q2M238 152 aa0.33□□□□□ -2.36
DENND4A-205ENST00000562540 RGS21Q2M5E4 152 aa0.33□□□□□ -2.36
DENND4A-205ENST00000562540 KRTAP26-1Q6PEX3 210 aa0.33□□□□□ -2.36
DENND4A-205ENST00000562540 OTUD6BQ8N6M0 293 aa0.33□□□□□ -2.36
DENND4A-205ENST00000562540 PLPP5Q8NEB5 264 aa0.33□□□□□ -2.36
DENND4A-205ENST00000562540 GNPDA2Q8TDQ7 276 aa0.33□□□□□ -2.36
DENND4A-205ENST00000562540 BTF3L4Q96K17 158 aa0.33□□□□□ -2.36
DENND4A-205ENST00000562540 LINC00052Q96N35 136 aa0.33□□□□□ -2.36
DENND4A-205ENST00000562540 SIGMAR1Q99720 223 aa0.33□□□□□ -2.36
DENND4A-205ENST00000562540 KIFC1Q9BW19 673 aa0.33□□□□□ -2.36
DENND4A-205ENST00000562540 TMEM126AQ9H061 195 aa0.33□□□□□ -2.36
DENND4A-205ENST00000562540 PSTPIP2Q9H939 334 aa0.33□□□□□ -2.36
DENND4A-205ENST00000562540 COL1A1P02452 1464 aaPredicted RBP0.33□□□□□ -2.36
DENND4A-205ENST00000562540 KMT2DO14686 5537 aa0.32□□□□□ -2.36
DENND4A-205ENST00000562540 RIMBP3CA6NJZ7 1639 aa0.32□□□□□ -2.36
DENND4A-205ENST00000562540 RIMBP3BA6NNM3 1639 aa0.32□□□□□ -2.36
DENND4A-205ENST00000562540 RIMBP3Q9UFD9 1639 aa0.32□□□□□ -2.36
DENND4A-205ENST00000562540 TRAV10A0A0B4J240 114 aa0.32□□□□□ -2.36
DENND4A-205ENST00000562540 F8W1H4 67 aa0.32□□□□□ -2.36
DENND4A-205ENST00000562540 NDUFB3O43676 98 aa0.32□□□□□ -2.36
DENND4A-205ENST00000562540 OR7C1O76099 320 aaPredicted RBP0.32□□□□□ -2.36
DENND4A-205ENST00000562540 HAND1O96004 215 aa0.32□□□□□ -2.36
DENND4A-205ENST00000562540 CD2P06729 351 aa0.32□□□□□ -2.36
DENND4A-205ENST00000562540 PIGPP57054 158 aa0.32□□□□□ -2.36
DENND4A-205ENST00000562540 C22orf39Q6P5X5 142 aa0.32□□□□□ -2.36
DENND4A-205ENST00000562540 C4orf22Q6V702 233 aa0.32□□□□□ -2.36
DENND4A-205ENST00000562540 TEN1Q86WV5 123 aa0.32□□□□□ -2.36
DENND4A-205ENST00000562540 OR11H6Q8NGC7 330 aa0.32□□□□□ -2.36
DENND4A-205ENST00000562540 OR10K1Q8NGX5 313 aa0.32□□□□□ -2.36
DENND4A-205ENST00000562540 ZNF431Q8TF32 576 aaPredicted RBP0.32□□□□□ -2.36
DENND4A-205ENST00000562540 CANT1Q8WVQ1 401 aa0.32□□□□□ -2.36
DENND4A-205ENST00000562540 SLC25A21Q9BQT8 299 aaPredicted RBP0.32□□□□□ -2.36
DENND4A-205ENST00000562540 C10orf95Q9H7T3 257 aa0.32□□□□□ -2.36
DENND4A-205ENST00000562540 UCK1Q9HA47 277 aa0.32□□□□□ -2.36
DENND4A-205ENST00000562540 NMNAT1Q9HAN9 279 aaPredicted RBP0.32□□□□□ -2.36
DENND4A-205ENST00000562540 PARVBQ9HBI1 364 aa0.32□□□□□ -2.36
DENND4A-205ENST00000562540 NIT2Q9NQR4 276 aa0.32□□□□□ -2.36
DENND4A-205ENST00000562540 KIF1BO60333 1816 aa0.31□□□□□ -2.36
DENND4A-205ENST00000562540 PIK3C2GO75747 1445 aa0.31□□□□□ -2.36
DENND4A-205ENST00000562540 MYO5AQ9Y4I1 1855 aaKnown RBP0.31□□□□□ -2.36
DENND4A-205ENST00000562540 PHGR1C9JFL3 82 aa0.31□□□□□ -2.36
DENND4A-205ENST00000562540 H3BRM9 83 aa0.31□□□□□ -2.36
DENND4A-205ENST00000562540 CDKN2CP42773 168 aa0.31□□□□□ -2.36
DENND4A-205ENST00000562540 MYL5Q02045 173 aa0.31□□□□□ -2.36
DENND4A-205ENST00000562540 SPINK9Q5DT21 86 aa0.31□□□□□ -2.36
DENND4A-205ENST00000562540 BCL2L15Q5TBC7 163 aa0.31□□□□□ -2.36
DENND4A-205ENST00000562540 HAGHLQ6PII5 290 aaPredicted RBP0.31□□□□□ -2.36
DENND4A-205ENST00000562540 OR5D14Q8NGL3 314 aa0.31□□□□□ -2.36
DENND4A-205ENST00000562540 IMUPQ9GZP8 106 aa0.31□□□□□ -2.36
DENND4A-205ENST00000562540 PCTPQ9UKL6 214 aa0.31□□□□□ -2.36
DENND4A-205ENST00000562540 KDM6AO15550 1401 aaPredicted RBP0.3□□□□□ -2.36
DENND4A-205ENST00000562540 ZFYVE9O95405 1425 aa0.3□□□□□ -2.36
DENND4A-205ENST00000562540 TNS3Q68CZ2 1445 aa0.3□□□□□ -2.36
DENND4A-205ENST00000562540 FMN1Q68DA7 1419 aa0.3□□□□□ -2.36
DENND4A-205ENST00000562540 TNCP24821 2201 aa0.3□□□□□ -2.36
DENND4A-205ENST00000562540 PLB1Q6P1J6 1458 aa0.3□□□□□ -2.36
DENND4A-205ENST00000562540 SIP14410 1827 aa0.3□□□□□ -2.36
DENND4A-205ENST00000562540 TRBV19A0A075B6N1 114 aa0.3□□□□□ -2.36
DENND4A-205ENST00000562540 E7EUB6 86 aa0.3□□□□□ -2.36
DENND4A-205ENST00000562540 CST8O60676 142 aa0.3□□□□□ -2.36
DENND4A-205ENST00000562540 SERPINB9P50453 376 aa0.3□□□□□ -2.36
DENND4A-205ENST00000562540 DSCR4P56555 118 aaPredicted RBP0.3□□□□□ -2.36
DENND4A-205ENST00000562540 ROMO1P60602 79 aa0.3□□□□□ -2.36
DENND4A-205ENST00000562540 EIF5AL1Q6IS14 154 aaKnown RBP0.3□□□□□ -2.36
DENND4A-205ENST00000562540 LINC00575Q6W349 94 aa0.3□□□□□ -2.36
DENND4A-205ENST00000562540 ZNF833PQ6ZTB9 187 aa0.3□□□□□ -2.36
DENND4A-205ENST00000562540 PSMF1Q92530 271 aa0.3□□□□□ -2.36
DENND4A-205ENST00000562540 TMEM138Q9NPI0 162 aa0.3□□□□□ -2.36
DENND4A-205ENST00000562540 MED29Q9NX70 200 aa0.3□□□□□ -2.36
DENND4A-205ENST00000562540 SLC22A13Q9Y226 551 aa0.3□□□□□ -2.36
DENND4A-205ENST00000562540 NCOA1Q15788 1441 aa0.3□□□□□ -2.36
DENND4A-205ENST00000562540 TRAV4A0A0B4J268 109 aa0.29□□□□□ -2.36
DENND4A-205ENST00000562540 M0R378 163 aa0.29□□□□□ -2.36
DENND4A-205ENST00000562540 TAX1BP3O14907 124 aa0.29□□□□□ -2.36
DENND4A-205ENST00000562540 ERC2-IT1O76042 136 aa0.29□□□□□ -2.36
DENND4A-205ENST00000562540 MYL6P60660 151 aa0.29□□□□□ -2.36
DENND4A-205ENST00000562540 CCL7P80098 99 aa0.29□□□□□ -2.36
DENND4A-205ENST00000562540 CDK6Q00534 326 aa0.29□□□□□ -2.36
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms