RNA–Protein interactions for RNA: ENST00000562199.1

CAPN3-211, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 385 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-211ENST00000562199 LINC00271P0C7V0 271 aa4.34□□□□□ -1.71
CAPN3-211ENST00000562199 MYCNOSP40205 109 aa4.34□□□□□ -1.71
CAPN3-211ENST00000562199 GFERP55789 205 aa4.34□□□□□ -1.71
CAPN3-211ENST00000562199 B3GALT5-AS1P59052 145 aa4.34□□□□□ -1.71
CAPN3-211ENST00000562199 HERV-K104P61576 105 aa4.34□□□□□ -1.71
CAPN3-211ENST00000562199 IGLV3-21P80748 117 aaPredicted RBP4.34□□□□□ -1.71
CAPN3-211ENST00000562199 CST6Q15828 149 aa4.34□□□□□ -1.71
CAPN3-211ENST00000562199 SPATA45Q537H7 98 aa4.34□□□□□ -1.71
CAPN3-211ENST00000562199 PAPPA-AS1Q5QFB9 102 aa4.34□□□□□ -1.71
CAPN3-211ENST00000562199 BVES-AS1Q5T3Y7 98 aa4.34□□□□□ -1.71
CAPN3-211ENST00000562199 ACP7Q6ZNF0 438 aa4.34□□□□□ -1.71
CAPN3-211ENST00000562199 ZNF709Q8N972 641 aa4.34□□□□□ -1.71
CAPN3-211ENST00000562199 OR52N5Q8NH56 324 aa4.34□□□□□ -1.71
CAPN3-211ENST00000562199 VSTM2AQ8TAG5 236 aa4.34□□□□□ -1.71
CAPN3-211ENST00000562199 RNF126Q9BV68 326 aa4.34□□□□□ -1.71
CAPN3-211ENST00000562199 GNB4Q9HAV0 340 aa4.34□□□□□ -1.71
CAPN3-211ENST00000562199 OTORQ9NRC9 128 aa4.34□□□□□ -1.71
CAPN3-211ENST00000562199 C11orf21Q9P2W6 132 aa4.34□□□□□ -1.71
CAPN3-211ENST00000562199 PXMP4Q9Y6I8 212 aa4.34□□□□□ -1.71
CAPN3-211ENST00000562199 R4GMQ9 66 aa4.34□□□□□ -1.71
CAPN3-211ENST00000562199 NOTCH4Q99466 2003 aa4.33□□□□□ -1.72
CAPN3-211ENST00000562199 TNRC6AQ8NDV7 1962 aaKnown RBP4.33□□□□□ -1.72
CAPN3-211ENST00000562199 PTPRSQ13332 1948 aa4.33□□□□□ -1.72
CAPN3-211ENST00000562199 A0A0J9YW62 118 aa4.33□□□□□ -1.72
CAPN3-211ENST00000562199 LOC101059948A0A1B0GTJ6 334 aa4.33□□□□□ -1.72
CAPN3-211ENST00000562199 EPM2AB3EWF7 344 aa4.33□□□□□ -1.72
CAPN3-211ENST00000562199 H0YGG7 62 aa4.33□□□□□ -1.72
CAPN3-211ENST00000562199 M0R2P5 195 aa4.33□□□□□ -1.72
CAPN3-211ENST00000562199 XKRYO14609 159 aa4.33□□□□□ -1.72
CAPN3-211ENST00000562199 PDCD6O75340 191 aa4.33□□□□□ -1.72
CAPN3-211ENST00000562199 DUSP14O95147 198 aaKnown RBP4.33□□□□□ -1.72
CAPN3-211ENST00000562199 BGLAPP02818 100 aa4.33□□□□□ -1.72
CAPN3-211ENST00000562199 FCGR3AP08637 254 aa4.33□□□□□ -1.72
CAPN3-211ENST00000562199 CA7P43166 264 aa4.33□□□□□ -1.72
CAPN3-211ENST00000562199 RND2P52198 227 aa4.33□□□□□ -1.72
CAPN3-211ENST00000562199 DAD1P61803 113 aa4.33□□□□□ -1.72
CAPN3-211ENST00000562199 RPS21P63220 83 aaKnown RBP4.33□□□□□ -1.72
CAPN3-211ENST00000562199 PAX8Q06710 450 aa4.33□□□□□ -1.72
CAPN3-211ENST00000562199 RTL8BQ17RB0 113 aa4.33□□□□□ -1.72
CAPN3-211ENST00000562199 SP6Q3SY56 376 aa4.33□□□□□ -1.72
CAPN3-211ENST00000562199 ZNF880Q6PDB4 577 aa4.33□□□□□ -1.72
CAPN3-211ENST00000562199 Q6ZWC4 215 aa4.33□□□□□ -1.72
CAPN3-211ENST00000562199 IL1F10Q8WWZ1 152 aa4.33□□□□□ -1.72
CAPN3-211ENST00000562199 IGFBPL1Q8WX77 278 aa4.33□□□□□ -1.72
CAPN3-211ENST00000562199 TMEM230Q96A57 120 aa4.33□□□□□ -1.72
CAPN3-211ENST00000562199 C2orf50Q96LR7 162 aa4.33□□□□□ -1.72
CAPN3-211ENST00000562199 METTL26Q96S19 204 aa4.33□□□□□ -1.72
CAPN3-211ENST00000562199 Q9HAA7 133 aa4.33□□□□□ -1.72
CAPN3-211ENST00000562199 FGF22Q9HCT0 170 aa4.33□□□□□ -1.72
CAPN3-211ENST00000562199 CACNA1IQ9P0X4 2223 aa4.33□□□□□ -1.72
CAPN3-211ENST00000562199 MYO10Q9HD67 2058 aa4.33□□□□□ -1.72
CAPN3-211ENST00000562199 CPAMD8Q8IZJ3 1885 aa4.32□□□□□ -1.72
CAPN3-211ENST00000562199 TRBV20-1A0A075B6N2 111 aa4.32□□□□□ -1.72
CAPN3-211ENST00000562199 TRBV24-1A0A075B6N3 115 aa4.32□□□□□ -1.72
CAPN3-211ENST00000562199 MUC21A0A0G2JKD1 596 aa4.32□□□□□ -1.72
CAPN3-211ENST00000562199 WI2-2373I1.2A0A1W2PRP0 233 aa4.32□□□□□ -1.72
CAPN3-211ENST00000562199 TMEM14DPA8MWL7 114 aa4.32□□□□□ -1.72
CAPN3-211ENST00000562199 H3BSH0 61 aa4.32□□□□□ -1.72
CAPN3-211ENST00000562199 SOCS1O15524 211 aa4.32□□□□□ -1.72
CAPN3-211ENST00000562199 PITX3O75364 302 aa4.32□□□□□ -1.72
CAPN3-211ENST00000562199 GPANK1O95872 356 aa4.32□□□□□ -1.72
CAPN3-211ENST00000562199 NGFP01138 241 aa4.32□□□□□ -1.72
CAPN3-211ENST00000562199 CLPSP04118 112 aa4.32□□□□□ -1.72
CAPN3-211ENST00000562199 SLC25A5P05141 298 aaKnown RBP4.32□□□□□ -1.72
CAPN3-211ENST00000562199 CXCL1P09341 107 aa4.32□□□□□ -1.72
CAPN3-211ENST00000562199 CRYGAP11844 174 aa4.32□□□□□ -1.72
CAPN3-211ENST00000562199 RPS27P42677 84 aaKnown RBP4.32□□□□□ -1.72
CAPN3-211ENST00000562199 QRFPP83859 136 aa4.32□□□□□ -1.72
CAPN3-211ENST00000562199 MSMO1Q15800 293 aa4.32□□□□□ -1.72
CAPN3-211ENST00000562199 SPRNQ5BIV9 151 aa4.32□□□□□ -1.72
CAPN3-211ENST00000562199 AAED1Q7RTV5 226 aa4.32□□□□□ -1.72
CAPN3-211ENST00000562199 SFTPA1Q8IWL2 248 aa4.32□□□□□ -1.72
CAPN3-211ENST00000562199 SLC22A24Q8N4F4 322 aa4.32□□□□□ -1.72
CAPN3-211ENST00000562199 ZIC4Q8N9L1 334 aa4.32□□□□□ -1.72
CAPN3-211ENST00000562199 OR51H1Q8NH63 302 aa4.32□□□□□ -1.72
CAPN3-211ENST00000562199 ZNF563Q8TA94 476 aa4.32□□□□□ -1.72
CAPN3-211ENST00000562199 RAB37Q96AX2 223 aa4.32□□□□□ -1.72
CAPN3-211ENST00000562199 OVOL2Q9BRP0 275 aa4.32□□□□□ -1.72
CAPN3-211ENST00000562199 NAA60Q9H7X0 242 aa4.32□□□□□ -1.72
CAPN3-211ENST00000562199 DEPPQ9NTK1 212 aa4.32□□□□□ -1.72
CAPN3-211ENST00000562199 SPCS1Q9Y6A9 102 aa4.32□□□□□ -1.72
CAPN3-211ENST00000562199 EML5Q05BV3 1969 aa4.32□□□□□ -1.72
CAPN3-211ENST00000562199 TMEM131Q92545 1883 aa4.32□□□□□ -1.72
CAPN3-211ENST00000562199 SNRNP200O75643 2136 aaKnown RBP4.31□□□□□ -1.72
CAPN3-211ENST00000562199 C3orf85A0A1B0GTC6 90 aa4.31□□□□□ -1.72
CAPN3-211ENST00000562199 ZNF727A8MUV8 499 aa4.31□□□□□ -1.72
CAPN3-211ENST00000562199 C9JQL5 133 aa4.31□□□□□ -1.72
CAPN3-211ENST00000562199 JTBO76095 146 aa4.31□□□□□ -1.72
CAPN3-211ENST00000562199 GYPAP02724 150 aa4.31□□□□□ -1.72
CAPN3-211ENST00000562199 LINC00869P0C866 280 aa4.31□□□□□ -1.72
CAPN3-211ENST00000562199 ZNF117Q03924 483 aa4.31□□□□□ -1.72
CAPN3-211ENST00000562199 EBI3Q14213 229 aa4.31□□□□□ -1.72
CAPN3-211ENST00000562199 NNATQ16517 81 aa4.31□□□□□ -1.72
CAPN3-211ENST00000562199 CENPWQ5EE01 88 aa4.31□□□□□ -1.72
CAPN3-211ENST00000562199 RPL7L1Q6DKI1 246 aaKnown RBP4.31□□□□□ -1.72
CAPN3-211ENST00000562199 SLC25A34Q6PIV7 304 aa4.31□□□□□ -1.72
CAPN3-211ENST00000562199 LINC00311Q8N616 119 aa4.31□□□□□ -1.72
CAPN3-211ENST00000562199 OR10G8Q8NGN5 311 aa4.31□□□□□ -1.72
CAPN3-211ENST00000562199 OR10AG1Q8NH19 301 aa4.31□□□□□ -1.72
CAPN3-211ENST00000562199 SCGB1C1Q8TD33 95 aa4.31□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 63.2 ms