RNA–Protein interactions for RNA: ENST00000561673.1

CLK3-205, Transcript of CDC like kinase 3, humanhuman

TSL 3

Gene CLK3, Length 639 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-205ENST00000561673 NUP62P37198 522 aaPredicted RBP7.45□□□□□ -1.22
CLK3-205ENST00000561673 NKX2-1P43699 371 aaPredicted RBP7.45□□□□□ -1.22
CLK3-205ENST00000561673 UBE2MP61081 183 aaKnown RBP7.45□□□□□ -1.22
CLK3-205ENST00000561673 RPP30P78346 268 aaKnown RBP7.45□□□□□ -1.22
CLK3-205ENST00000561673 SPANXN5Q5MJ07 72 aa7.45□□□□□ -1.22
CLK3-205ENST00000561673 C1orf194Q5T5A4 169 aa7.45□□□□□ -1.22
CLK3-205ENST00000561673 GSG1LQ6UXU4 331 aa7.45□□□□□ -1.22
CLK3-205ENST00000561673 THAP8Q8NA92 274 aa7.45□□□□□ -1.22
CLK3-205ENST00000561673 SDHCQ99643 169 aaPredicted RBP7.45□□□□□ -1.22
CLK3-205ENST00000561673 HRH4Q9H3N8 390 aa7.45□□□□□ -1.22
CLK3-205ENST00000561673 AGRNO00468 2067 aa7.45□□□□□ -1.22
CLK3-205ENST00000561673 LINC00854A0A1B0GVQ3 168 aa7.44□□□□□ -1.22
CLK3-205ENST00000561673 NAP1L6A6NFF2 107 aa7.44□□□□□ -1.22
CLK3-205ENST00000561673 ADAP1O75689 374 aa7.44□□□□□ -1.22
CLK3-205ENST00000561673 NDUFB6O95139 128 aa7.44□□□□□ -1.22
CLK3-205ENST00000561673 HLA-DRB4P13762 266 aa7.44□□□□□ -1.22
CLK3-205ENST00000561673 INPP1P49441 399 aa7.44□□□□□ -1.22
CLK3-205ENST00000561673 DEFB1P60022 68 aa7.44□□□□□ -1.22
CLK3-205ENST00000561673 NUTF2P61970 127 aaKnown RBP7.44□□□□□ -1.22
CLK3-205ENST00000561673 ID3Q02535 119 aa7.44□□□□□ -1.22
CLK3-205ENST00000561673 GDF5OSQ5U4N7 250 aa7.44□□□□□ -1.22
CLK3-205ENST00000561673 TRIQKQ629K1 86 aa7.44□□□□□ -1.22
CLK3-205ENST00000561673 LGALS9CQ6DKI2 356 aa7.44□□□□□ -1.22
CLK3-205ENST00000561673 C2CD4CQ8TF44 421 aa7.44□□□□□ -1.22
CLK3-205ENST00000561673 LINC00052Q96N35 136 aa7.44□□□□□ -1.22
CLK3-205ENST00000561673 XCL2Q9UBD3 114 aa7.44□□□□□ -1.22
CLK3-205ENST00000561673 TBC1D24Q9ULP9 559 aa7.44□□□□□ -1.22
CLK3-205ENST00000561673 HLA-DRB4X5D2U9 266 aa7.44□□□□□ -1.22
CLK3-205ENST00000561673 DNAH2Q9P225 4427 aa7.44□□□□□ -1.22
CLK3-205ENST00000561673 H3BP45 60 aa7.43□□□□□ -1.22
CLK3-205ENST00000561673 SOCS3O14543 225 aa7.43□□□□□ -1.22
CLK3-205ENST00000561673 OR4E1P0C645 316 aa7.43□□□□□ -1.22
CLK3-205ENST00000561673 GATA2P23769 480 aaPredicted RBP7.43□□□□□ -1.22
CLK3-205ENST00000561673 ID1P41134 155 aa7.43□□□□□ -1.22
CLK3-205ENST00000561673 POLR2GP62487 172 aaKnown RBP eCLIP7.43□□□□□ -1.22
CLK3-205ENST00000561673 TMEM182Q6ZP80 229 aaPredicted RBP7.43□□□□□ -1.22
CLK3-205ENST00000561673 OR8I2Q8N0Y5 310 aa7.43□□□□□ -1.22
CLK3-205ENST00000561673 RPP25LQ8N5L8 163 aaKnown RBP7.43□□□□□ -1.22
CLK3-205ENST00000561673 PPP1R14BQ96C90 147 aa7.43□□□□□ -1.22
CLK3-205ENST00000561673 STRAPQ9Y3F4 350 aaKnown RBP7.43□□□□□ -1.22
CLK3-205ENST00000561673 IGLL5B9A064 214 aa7.42□□□□□ -1.22
CLK3-205ENST00000561673 C11orf94C9JXX5 98 aa7.42□□□□□ -1.22
CLK3-205ENST00000561673 DEDDO75618 318 aa7.42□□□□□ -1.22
CLK3-205ENST00000561673 CFDP00746 253 aaPredicted RBP7.42□□□□□ -1.22
CLK3-205ENST00000561673 IGKV3-20P01619 116 aa7.42□□□□□ -1.22
CLK3-205ENST00000561673 ORM2P19652 201 aa7.42□□□□□ -1.22
CLK3-205ENST00000561673 ANXA7P20073 488 aaKnown RBP7.42□□□□□ -1.22
CLK3-205ENST00000561673 HLA-DMBP28068 263 aa7.42□□□□□ -1.22
CLK3-205ENST00000561673 BTCP35070 178 aa7.42□□□□□ -1.22
CLK3-205ENST00000561673 PSMB3P49720 205 aa7.42□□□□□ -1.22
CLK3-205ENST00000561673 OR4D5Q8NGN0 318 aa7.42□□□□□ -1.22
CLK3-205ENST00000561673 COQ8AQ8NI60 647 aa7.42□□□□□ -1.22
CLK3-205ENST00000561673 C17orf77Q96MU5 243 aa7.42□□□□□ -1.22
CLK3-205ENST00000561673 C1QTNF4Q9BXJ3 329 aa7.42□□□□□ -1.22
CLK3-205ENST00000561673 SAV1Q9H4B6 383 aaPredicted RBP7.42□□□□□ -1.22
CLK3-205ENST00000561673 ZNF98A6NK75 572 aa7.41□□□□□ -1.22
CLK3-205ENST00000561673 CENPXA8MT69 81 aa7.41□□□□□ -1.22
CLK3-205ENST00000561673 SSSCA1O60232 199 aa7.41□□□□□ -1.22
CLK3-205ENST00000561673 IFNA21P01568 189 aa7.41□□□□□ -1.22
CLK3-205ENST00000561673 PAX9P55771 341 aa7.41□□□□□ -1.22
CLK3-205ENST00000561673 FXYD7P58549 80 aa7.41□□□□□ -1.22
CLK3-205ENST00000561673 AKR1C1Q04828 323 aa7.41□□□□□ -1.22
CLK3-205ENST00000561673 C4orf46Q504U0 113 aa7.41□□□□□ -1.22
CLK3-205ENST00000561673 FOXI2Q6ZQN5 318 aa7.41□□□□□ -1.22
CLK3-205ENST00000561673 Q6ZTC4 211 aa7.41□□□□□ -1.22
CLK3-205ENST00000561673 ACOT7LQ6ZUV0 252 aa7.41□□□□□ -1.22
CLK3-205ENST00000561673 TMEM144Q7Z5S9 345 aa7.41□□□□□ -1.22
CLK3-205ENST00000561673 BPIFCQ8NFQ6 507 aa7.41□□□□□ -1.22
CLK3-205ENST00000561673 SMIM8Q96KF7 97 aa7.41□□□□□ -1.22
CLK3-205ENST00000561673 C20orf173Q96LM9 149 aa7.41□□□□□ -1.22
CLK3-205ENST00000561673 RSG1Q9BU20 258 aa7.41□□□□□ -1.22
CLK3-205ENST00000561673 SLC25A32Q9H2D1 315 aa7.41□□□□□ -1.22
CLK3-205ENST00000561673 SLC25A22Q9H936 323 aa7.41□□□□□ -1.22
CLK3-205ENST00000561673 PSENENQ9NZ42 101 aa7.41□□□□□ -1.22
CLK3-205ENST00000561673 APLNQ9ULZ1 77 aa7.41□□□□□ -1.22
CLK3-205ENST00000561673 SLC45A2Q9UMX9 530 aa7.41□□□□□ -1.22
CLK3-205ENST00000561673 CELA1Q9UNI1 258 aa7.41□□□□□ -1.22
CLK3-205ENST00000561673 PMS2P5A8MQ11 134 aa7.4□□□□□ -1.22
CLK3-205ENST00000561673 F6UB75 175 aa7.4□□□□□ -1.22
CLK3-205ENST00000561673 ISLRO14498 428 aa7.4□□□□□ -1.22
CLK3-205ENST00000561673 IL7P13232 177 aa7.4□□□□□ -1.22
CLK3-205ENST00000561673 GALR1P47211 349 aa7.4□□□□□ -1.22
CLK3-205ENST00000561673 TCTAP57738 103 aa7.4□□□□□ -1.22
CLK3-205ENST00000561673 C12orf74Q32Q52 190 aa7.4□□□□□ -1.22
CLK3-205ENST00000561673 ZNF705AQ6ZN79 300 aaPredicted RBP7.4□□□□□ -1.22
CLK3-205ENST00000561673 ZNF767PQ75MW2 155 aa7.4□□□□□ -1.22
CLK3-205ENST00000561673 ZNF709Q8N972 641 aa7.4□□□□□ -1.22
CLK3-205ENST00000561673 OR4B1Q8NGF8 309 aa7.4□□□□□ -1.22
CLK3-205ENST00000561673 OR1B1Q8NGR6 318 aa7.4□□□□□ -1.22
CLK3-205ENST00000561673 C16orf92Q96LL3 132 aa7.4□□□□□ -1.22
CLK3-205ENST00000561673 CLUHP3Q96NS8 147 aa7.4□□□□□ -1.22
CLK3-205ENST00000561673 C7orf50Q9BRJ6 194 aaKnown RBP7.4□□□□□ -1.22
CLK3-205ENST00000561673 HECTD4Q9Y4D8 3996 aa7.4□□□□□ -1.23
CLK3-205ENST00000561673 TRAV10A0A0B4J240 114 aa7.39□□□□□ -1.23
CLK3-205ENST00000561673 A0A0J9YX75 114 aa7.39□□□□□ -1.23
CLK3-205ENST00000561673 SMCO3A2RU48 225 aa7.39□□□□□ -1.23
CLK3-205ENST00000561673 ZNF705FA8MVS1 300 aaPredicted RBP7.39□□□□□ -1.23
CLK3-205ENST00000561673 PLA2G10O15496 165 aa7.39□□□□□ -1.23
CLK3-205ENST00000561673 CCNKO75909 580 aa7.39□□□□□ -1.23
CLK3-205ENST00000561673 IL5P05113 134 aa7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms