RNA–Protein interactions for RNA: ENST00000561400.1

HERC1-214, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 2,215 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-214ENST00000561400 ZNF429Q86V71 674 aa9.3□□□□□ -0.92
HERC1-214ENST00000561400 ADAD2Q8NCV1 583 aaKnown RBP9.3□□□□□ -0.92
HERC1-214ENST00000561400 OR5AN1Q8NGI8 311 aa9.3□□□□□ -0.92
HERC1-214ENST00000561400 AQP10Q96PS8 301 aa9.3□□□□□ -0.92
HERC1-214ENST00000561400 HSD17B10Q99714 261 aaKnown RBP9.3□□□□□ -0.92
HERC1-214ENST00000561400 NIPSNAP3BQ9BS92 247 aa9.3□□□□□ -0.92
HERC1-214ENST00000561400 NPVFQ9HCQ7 196 aa9.3□□□□□ -0.92
HERC1-214ENST00000561400 SETD2Q9BYW2 2564 aaPredicted RBP9.3□□□□□ -0.92
HERC1-214ENST00000561400 GAGE10A6NGK3 116 aa9.29□□□□□ -0.92
HERC1-214ENST00000561400 FAM90A9PA6NNJ1 464 aa9.29□□□□□ -0.92
HERC1-214ENST00000561400 H0YJW9 148 aa9.29□□□□□ -0.92
HERC1-214ENST00000561400 IGHV4-59P01825 116 aa9.29□□□□□ -0.92
HERC1-214ENST00000561400 THBS3P49746 956 aa9.29□□□□□ -0.92
HERC1-214ENST00000561400 FAM3BP58499 235 aaPredicted RBP9.29□□□□□ -0.92
HERC1-214ENST00000561400 LRRC75BQ2VPJ9 315 aa9.29□□□□□ -0.92
HERC1-214ENST00000561400 ABCA11PQ4W5N1 156 aa9.29□□□□□ -0.92
HERC1-214ENST00000561400 ACTL10Q5JWF8 245 aa9.29□□□□□ -0.92
HERC1-214ENST00000561400 TBC1D26Q86UD7 250 aa9.29□□□□□ -0.92
HERC1-214ENST00000561400 ZDHHC22Q8N966 263 aa9.29□□□□□ -0.92
HERC1-214ENST00000561400 OR51H1Q8NH63 302 aa9.29□□□□□ -0.92
HERC1-214ENST00000561400 ZDHHC16Q969W1 377 aa9.29□□□□□ -0.92
HERC1-214ENST00000561400 TMEM230Q96A57 120 aa9.29□□□□□ -0.92
HERC1-214ENST00000561400 OR10C1Q96KK4 312 aa9.29□□□□□ -0.92
HERC1-214ENST00000561400 NDFIP1Q9BT67 221 aa9.29□□□□□ -0.92
HERC1-214ENST00000561400 RNF126Q9BV68 326 aa9.29□□□□□ -0.92
HERC1-214ENST00000561400 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP9.29□□□□□ -0.92
HERC1-214ENST00000561400 H3BUX3 64 aa9.29□□□□□ -0.92
HERC1-214ENST00000561400 AREGP15514 252 aa9.29□□□□□ -0.92
HERC1-214ENST00000561400 IER3P46695 156 aa9.29□□□□□ -0.92
HERC1-214ENST00000561400 DYNLT3P51808 116 aa9.29□□□□□ -0.92
HERC1-214ENST00000561400 CNN1P51911 297 aaKnown RBP9.29□□□□□ -0.92
HERC1-214ENST00000561400 RND3P61587 244 aa9.29□□□□□ -0.92
HERC1-214ENST00000561400 MEF2BQ02080 365 aaPredicted RBP9.29□□□□□ -0.92
HERC1-214ENST00000561400 SCGB3A2Q96PL1 93 aa9.29□□□□□ -0.92
HERC1-214ENST00000561400 HOXA3O43365 443 aaPredicted RBP9.28□□□□□ -0.92
HERC1-214ENST00000561400 IGKV1-16P04430 117 aa9.28□□□□□ -0.92
HERC1-214ENST00000561400 LYL1P12980 280 aa9.28□□□□□ -0.92
HERC1-214ENST00000561400 TNXAQ16473 311 aa9.28□□□□□ -0.92
HERC1-214ENST00000561400 IAH1Q2TAA2 248 aaPredicted RBP9.28□□□□□ -0.92
HERC1-214ENST00000561400 OR4F17Q8NGA8 305 aa9.28□□□□□ -0.92
HERC1-214ENST00000561400 ADTRPQ96IZ2 230 aa9.28□□□□□ -0.92
HERC1-214ENST00000561400 RITA1Q96K30 269 aa9.28□□□□□ -0.92
HERC1-214ENST00000561400 RCHY1Q96PM5 261 aa9.28□□□□□ -0.92
HERC1-214ENST00000561400 OR4F4Q96R69 305 aa9.28□□□□□ -0.92
HERC1-214ENST00000561400 ASCL2Q99929 193 aa9.28□□□□□ -0.92
HERC1-214ENST00000561400 A0A087WX48 190 aa9.28□□□□□ -0.92
HERC1-214ENST00000561400 TMEM189A5PLL7 270 aa9.28□□□□□ -0.92
HERC1-214ENST00000561400 ZNF207O43670 478 aaKnown RBP9.28□□□□□ -0.92
HERC1-214ENST00000561400 IGKV1D-33P01593 117 aa9.28□□□□□ -0.92
HERC1-214ENST00000561400 IGKV1-33P01594 117 aa9.28□□□□□ -0.92
HERC1-214ENST00000561400 RPL7L1Q6DKI1 246 aaKnown RBP9.28□□□□□ -0.92
HERC1-214ENST00000561400 UHRF2Q96PU4 802 aa9.28□□□□□ -0.92
HERC1-214ENST00000561400 FBXL17Q9UF56 701 aa9.28□□□□□ -0.92
HERC1-214ENST00000561400 JMJD1CQ15652 2540 aa9.28□□□□□ -0.92
HERC1-214ENST00000561400 TRAV8-6A0A0B4J262 113 aa9.27□□□□□ -0.93
HERC1-214ENST00000561400 MAP1LC3B2A6NCE7 125 aa9.27□□□□□ -0.93
HERC1-214ENST00000561400 FCGR3BO75015 233 aa9.27□□□□□ -0.93
HERC1-214ENST00000561400 TPPP2P59282 170 aa9.27□□□□□ -0.93
HERC1-214ENST00000561400 SUPT4H1P63272 117 aaKnown RBP9.27□□□□□ -0.93
HERC1-214ENST00000561400 HIST1H1AQ02539 215 aaPredicted RBP9.27□□□□□ -0.93
HERC1-214ENST00000561400 CATR1Q13166 79 aa9.27□□□□□ -0.93
HERC1-214ENST00000561400 EBI3Q14213 229 aa9.27□□□□□ -0.93
HERC1-214ENST00000561400 MAP1LC3BQ9GZQ8 125 aa9.27□□□□□ -0.93
HERC1-214ENST00000561400 ESM1Q9NQ30 184 aa9.27□□□□□ -0.93
HERC1-214ENST00000561400 TNFRSF19Q9NS68 423 aa9.27□□□□□ -0.93
HERC1-214ENST00000561400 WASHC3Q9Y3C0 194 aa9.27□□□□□ -0.93
HERC1-214ENST00000561400 PLXNB1O43157 2135 aa9.27□□□□□ -0.93
HERC1-214ENST00000561400 CRYM-AS1A6NIL9 109 aa9.27□□□□□ -0.93
HERC1-214ENST00000561400 APOA2P02652 100 aa9.27□□□□□ -0.93
HERC1-214ENST00000561400 CD33P20138 364 aa9.27□□□□□ -0.93
HERC1-214ENST00000561400 HES1Q14469 280 aa9.27□□□□□ -0.93
HERC1-214ENST00000561400 LY6EQ16553 131 aa9.27□□□□□ -0.93
HERC1-214ENST00000561400 SLC25A42Q86VD7 318 aa9.27□□□□□ -0.93
HERC1-214ENST00000561400 SSMEM1Q8WWF3 244 aa9.27□□□□□ -0.93
HERC1-214ENST00000561400 TMEM37Q8WXS4 190 aa9.27□□□□□ -0.93
HERC1-214ENST00000561400 C19orf24Q9BVV8 132 aa9.27□□□□□ -0.93
HERC1-214ENST00000561400 NPFFR1Q9GZQ6 430 aa9.27□□□□□ -0.93
HERC1-214ENST00000561400 C3orf85A0A1B0GTC6 90 aa9.26□□□□□ -0.93
HERC1-214ENST00000561400 MSGN1A6NI15 193 aa9.26□□□□□ -0.93
HERC1-214ENST00000561400 SRP19P09132 144 aaKnown RBP9.26□□□□□ -0.93
HERC1-214ENST00000561400 FAM106CPP0CH98 169 aa9.26□□□□□ -0.93
HERC1-214ENST00000561400 PNRC1Q12796 327 aaPredicted RBP9.26□□□□□ -0.93
HERC1-214ENST00000561400 SP6Q3SY56 376 aa9.26□□□□□ -0.93
HERC1-214ENST00000561400 SPSB3Q6PJ21 355 aa9.26□□□□□ -0.93
HERC1-214ENST00000561400 C19orf35Q6ZS72 473 aa9.26□□□□□ -0.93
HERC1-214ENST00000561400 TMEM219Q86XT9 240 aa9.26□□□□□ -0.93
HERC1-214ENST00000561400 PDPNQ86YL7 162 aa9.26□□□□□ -0.93
HERC1-214ENST00000561400 Q8N6K4 173 aa9.26□□□□□ -0.93
HERC1-214ENST00000561400 NAA60Q9H7X0 242 aa9.26□□□□□ -0.93
HERC1-214ENST00000561400 TCF19Q9Y242 345 aa9.26□□□□□ -0.93
HERC1-214ENST00000561400 TNCP24821 2201 aa9.26□□□□□ -0.93
HERC1-214ENST00000561400 A6NDX4 124 aa9.25□□□□□ -0.93
HERC1-214ENST00000561400 SMIM9A6NGZ8 99 aa9.25□□□□□ -0.93
HERC1-214ENST00000561400 MOSP00540 346 aa9.25□□□□□ -0.93
HERC1-214ENST00000561400 CNTFRP26992 372 aa9.25□□□□□ -0.93
HERC1-214ENST00000561400 RTL8BQ17RB0 113 aa9.25□□□□□ -0.93
HERC1-214ENST00000561400 OR2T10Q8NGZ9 312 aa9.25□□□□□ -0.93
HERC1-214ENST00000561400 CMTM2Q8TAZ6 248 aa9.25□□□□□ -0.93
HERC1-214ENST00000561400 OR5B12Q96R08 314 aa9.25□□□□□ -0.93
HERC1-214ENST00000561400 NMES1Q9C002 83 aa9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms