RNA–Protein interactions for RNA: ENST00000561377.1

HMBOX1-216, Transcript of homeobox containing 1, humanhuman

TSL 5

Gene HMBOX1, Length 307 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMBOX1-216ENST00000561377 PTPRFP10586 1907 aa0.17□□□□□ -2.38
HMBOX1-216ENST00000561377 A0A087WSZ3 146 aa0.16□□□□□ -2.38
HMBOX1-216ENST00000561377 TRGV10A0A0A0MS01 117 aa0.16□□□□□ -2.38
HMBOX1-216ENST00000561377 TLCD2A6NGC4 264 aa0.16□□□□□ -2.38
HMBOX1-216ENST00000561377 A8MWV9 139 aa0.16□□□□□ -2.38
HMBOX1-216ENST00000561377 E7EUB6 86 aa0.16□□□□□ -2.38
HMBOX1-216ENST00000561377 PDE6DO43924 150 aa0.16□□□□□ -2.38
HMBOX1-216ENST00000561377 RPP14O95059 124 aaKnown RBP0.16□□□□□ -2.38
HMBOX1-216ENST00000561377 HOXA6P31267 233 aa0.16□□□□□ -2.38
HMBOX1-216ENST00000561377 DSCR4P56555 118 aaPredicted RBP0.16□□□□□ -2.38
HMBOX1-216ENST00000561377 DEFA1P59665 94 aa0.16□□□□□ -2.38
HMBOX1-216ENST00000561377 ROMO1P60602 79 aa0.16□□□□□ -2.38
HMBOX1-216ENST00000561377 LSM6P62312 80 aaKnown RBP0.16□□□□□ -2.38
HMBOX1-216ENST00000561377 CIRBPQ14011 172 aaKnown RBP0.16□□□□□ -2.38
HMBOX1-216ENST00000561377 C22orf39Q6P5X5 142 aa0.16□□□□□ -2.38
HMBOX1-216ENST00000561377 ST6GALNAC3Q8NDV1 305 aa0.16□□□□□ -2.38
HMBOX1-216ENST00000561377 SLC30A7Q8NEW0 376 aa0.16□□□□□ -2.38
HMBOX1-216ENST00000561377 YPEL2Q96QA6 119 aa0.16□□□□□ -2.38
HMBOX1-216ENST00000561377 FBXO5Q9UKT4 447 aa0.16□□□□□ -2.38
HMBOX1-216ENST00000561377 FANCMQ8IYD8 2048 aa0.16□□□□□ -2.38
HMBOX1-216ENST00000561377 FREM3P0C091 2139 aa0.16□□□□□ -2.38
HMBOX1-216ENST00000561377 CECR2Q9BXF3 1484 aa0.16□□□□□ -2.38
HMBOX1-216ENST00000561377 TRAV4A0A0B4J268 109 aa0.15□□□□□ -2.39
HMBOX1-216ENST00000561377 GADD45GO95257 159 aa0.15□□□□□ -2.39
HMBOX1-216ENST00000561377 IGLV3-1P01715 115 aa0.15□□□□□ -2.39
HMBOX1-216ENST00000561377 TCRBP04435 133 aa0.15□□□□□ -2.39
HMBOX1-216ENST00000561377 SRIP30626 198 aa0.15□□□□□ -2.39
HMBOX1-216ENST00000561377 EIF5AP63241 154 aaKnown RBP0.15□□□□□ -2.39
HMBOX1-216ENST00000561377 AESQ08117 197 aa0.15□□□□□ -2.39
HMBOX1-216ENST00000561377 RRN3P1Q2M238 152 aa0.15□□□□□ -2.39
HMBOX1-216ENST00000561377 SPINK9Q5DT21 86 aa0.15□□□□□ -2.39
HMBOX1-216ENST00000561377 LYRM7Q5U5X0 104 aa0.15□□□□□ -2.39
HMBOX1-216ENST00000561377 HAGHLQ6PII5 290 aaPredicted RBP0.15□□□□□ -2.39
HMBOX1-216ENST00000561377 TET1Q8NFU7 2136 aa0.15□□□□□ -2.39
HMBOX1-216ENST00000561377 OR51A2Q8NGJ7 313 aa0.15□□□□□ -2.39
HMBOX1-216ENST00000561377 SLC25A40Q8TBP6 338 aa0.15□□□□□ -2.39
HMBOX1-216ENST00000561377 RNASE7Q9H1E1 156 aaKnown RBP0.15□□□□□ -2.39
HMBOX1-216ENST00000561377 UQCC1Q9NVA1 299 aa0.15□□□□□ -2.39
HMBOX1-216ENST00000561377 C14orf105Q9NVL8 296 aa0.15□□□□□ -2.39
HMBOX1-216ENST00000561377 PLAC8Q9NZF1 115 aa0.15□□□□□ -2.39
HMBOX1-216ENST00000561377 PRELID3BQ9Y3B1 194 aa0.15□□□□□ -2.39
HMBOX1-216ENST00000561377 RFX7Q2KHR2 1363 aa0.15□□□□□ -2.39
HMBOX1-216ENST00000561377 TRBV19A0A075B6N1 114 aa0.14□□□□□ -2.39
HMBOX1-216ENST00000561377 A0A0D9SG42 100 aa0.14□□□□□ -2.39
HMBOX1-216ENST00000561377 TIMM17BO60830 172 aa0.14□□□□□ -2.39
HMBOX1-216ENST00000561377 DNAL4O96015 105 aa0.14□□□□□ -2.39
HMBOX1-216ENST00000561377 FOXA3P55318 350 aaPredicted RBP0.14□□□□□ -2.39
HMBOX1-216ENST00000561377 CCL7P80098 99 aa0.14□□□□□ -2.39
HMBOX1-216ENST00000561377 OR2T35Q8NGX2 323 aa0.14□□□□□ -2.39
HMBOX1-216ENST00000561377 TLNRD1Q9H1K6 362 aa0.14□□□□□ -2.39
HMBOX1-216ENST00000561377 TNFSF18Q9UNG2 199 aa0.14□□□□□ -2.39
HMBOX1-216ENST00000561377 ZDBF2Q9HCK1 2354 aa0.14□□□□□ -2.39
HMBOX1-216ENST00000561377 CCDC144AA2RUR9 1427 aa0.13□□□□□ -2.39
HMBOX1-216ENST00000561377 NUP98P52948 1817 aa0.13□□□□□ -2.39
HMBOX1-216ENST00000561377 C1orf196B1AJZ1 125 aa0.13□□□□□ -2.39
HMBOX1-216ENST00000561377 KRTAP2-3P0C7H8 128 aa0.13□□□□□ -2.39
HMBOX1-216ENST00000561377 SMIM17P0DL12 118 aa0.13□□□□□ -2.39
HMBOX1-216ENST00000561377 SRP14P37108 136 aaKnown RBP0.13□□□□□ -2.39
HMBOX1-216ENST00000561377 KRR1Q13601 381 aaKnown RBP0.13□□□□□ -2.39
HMBOX1-216ENST00000561377 C4orf22Q6V702 233 aa0.13□□□□□ -2.39
HMBOX1-216ENST00000561377 ATOH7Q8N100 152 aa0.13□□□□□ -2.39
HMBOX1-216ENST00000561377 OR11H6Q8NGC7 330 aa0.13□□□□□ -2.39
HMBOX1-216ENST00000561377 CANT1Q8WVQ1 401 aa0.13□□□□□ -2.39
HMBOX1-216ENST00000561377 PRAP1Q96NZ9 151 aa0.13□□□□□ -2.39
HMBOX1-216ENST00000561377 KRTAP2-4Q9BYR9 128 aa0.13□□□□□ -2.39
HMBOX1-216ENST00000561377 KRTAP2-1Q9BYU5 128 aa0.13□□□□□ -2.39
HMBOX1-216ENST00000561377 SLC22A13Q9Y226 551 aa0.13□□□□□ -2.39
HMBOX1-216ENST00000561377 ZGRF1Q86YA3 2104 aa0.13□□□□□ -2.39
HMBOX1-216ENST00000561377 ARHGEF11O15085 1522 aa0.13□□□□□ -2.39
HMBOX1-216ENST00000561377 SYNE1Q8NF91 8797 aaKnown RBP0.12□□□□□ -2.39
HMBOX1-216ENST00000561377 MEGF8Q7Z7M0 2845 aa0.12□□□□□ -2.39
HMBOX1-216ENST00000561377 TNCP24821 2201 aa0.12□□□□□ -2.39
HMBOX1-216ENST00000561377 TRAV10A0A0B4J240 114 aa0.12□□□□□ -2.39
HMBOX1-216ENST00000561377 OR2T8A6NH00 312 aa0.12□□□□□ -2.39
HMBOX1-216ENST00000561377 OR7C1O76099 320 aaPredicted RBP0.12□□□□□ -2.39
HMBOX1-216ENST00000561377 PIGPP57054 158 aa0.12□□□□□ -2.39
HMBOX1-216ENST00000561377 RHOBP62745 196 aa0.12□□□□□ -2.39
HMBOX1-216ENST00000561377 PDZD9Q8IXQ8 264 aa0.12□□□□□ -2.39
HMBOX1-216ENST00000561377 OTUD6BQ8N6M0 293 aa0.12□□□□□ -2.39
HMBOX1-216ENST00000561377 OR10K1Q8NGX5 313 aa0.12□□□□□ -2.39
HMBOX1-216ENST00000561377 TEX37Q96LM6 180 aa0.12□□□□□ -2.39
HMBOX1-216ENST00000561377 CCDC94Q9BW85 323 aaPredicted RBP0.12□□□□□ -2.39
HMBOX1-216ENST00000561377 IMUPQ9GZP8 106 aa0.12□□□□□ -2.39
HMBOX1-216ENST00000561377 LY96Q9Y6Y9 160 aa0.12□□□□□ -2.39
HMBOX1-216ENST00000561377 KLF7O75840 302 aaPredicted RBP0.11□□□□□ -2.39
HMBOX1-216ENST00000561377 RPS17P08708 135 aaKnown RBP0.11□□□□□ -2.39
HMBOX1-216ENST00000561377 OR10AC1Q8NH08 325 aa0.11□□□□□ -2.39
HMBOX1-216ENST00000561377 GNPDA2Q8TDQ7 276 aa0.11□□□□□ -2.39
HMBOX1-216ENST00000561377 PSMF1Q92530 271 aa0.11□□□□□ -2.39
HMBOX1-216ENST00000561377 NIT2Q9NQR4 276 aa0.11□□□□□ -2.39
HMBOX1-216ENST00000561377 TAS2R7Q9NYW3 318 aa0.11□□□□□ -2.39
HMBOX1-216ENST00000561377 PCTPQ9UKL6 214 aa0.11□□□□□ -2.39
HMBOX1-216ENST00000561377 ZFYVE9O95405 1425 aa0.11□□□□□ -2.39
HMBOX1-216ENST00000561377 SPTBP11277 2137 aa0.1□□□□□ -2.39
HMBOX1-216ENST00000561377 TRPM1Q7Z4N2 1603 aa0.1□□□□□ -2.39
HMBOX1-216ENST00000561377 NDUFB3O43676 98 aa0.1□□□□□ -2.39
HMBOX1-216ENST00000561377 GGCTO75223 188 aaKnown RBP0.1□□□□□ -2.39
HMBOX1-216ENST00000561377 LYPLA2O95372 231 aa0.1□□□□□ -2.39
HMBOX1-216ENST00000561377 COX7CP15954 63 aa0.1□□□□□ -2.39
HMBOX1-216ENST00000561377 MYL6P60660 151 aa0.1□□□□□ -2.39
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms