RNA–Protein interactions for RNA: ENST00000560861.1

SNX1-212, Transcript of sorting nexin 1, humanhuman

TSL 3

Gene SNX1, Length 850 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-212ENST00000560861 ORM2P19652 201 aa8.7□□□□□ -1.02
SNX1-212ENST00000560861 GCHFRP30047 84 aa8.7□□□□□ -1.02
SNX1-212ENST00000560861 LYZP61626 148 aa8.7□□□□□ -1.02
SNX1-212ENST00000560861 SLC35B1P78383 322 aa8.7□□□□□ -1.02
SNX1-212ENST00000560861 ICAM4Q14773 271 aa8.7□□□□□ -1.02
SNX1-212ENST00000560861 TCTEX1D4Q5JR98 221 aa8.7□□□□□ -1.02
SNX1-212ENST00000560861 TOR2AQ5JU69 321 aa8.7□□□□□ -1.02
SNX1-212ENST00000560861 TOMM20LQ6UXN7 152 aa8.7□□□□□ -1.02
SNX1-212ENST00000560861 OR1B1Q8NGR6 318 aa8.7□□□□□ -1.02
SNX1-212ENST00000560861 Q8WTZ3 238 aa8.7□□□□□ -1.02
SNX1-212ENST00000560861 CITED4Q96RK1 184 aa8.7□□□□□ -1.02
SNX1-212ENST00000560861 JMJD8Q96S16 334 aa8.7□□□□□ -1.02
SNX1-212ENST00000560861 SHANK2-AS3Q9BTD1 123 aa8.7□□□□□ -1.02
SNX1-212ENST00000560861 TECRQ9NZ01 308 aaKnown RBP8.7□□□□□ -1.02
SNX1-212ENST00000560861 HIGD1AQ9Y241 93 aa8.7□□□□□ -1.02
SNX1-212ENST00000560861 CLPSL1A2RUU4 121 aa8.69□□□□□ -1.02
SNX1-212ENST00000560861 RBFOX3A6NFN3 312 aa8.69□□□□□ -1.02
SNX1-212ENST00000560861 PPP5D1E7EU14 171 aa8.69□□□□□ -1.02
SNX1-212ENST00000560861 BMPR1BO00238 502 aa8.69□□□□□ -1.02
SNX1-212ENST00000560861 MRPS12O15235 138 aaKnown RBP8.69□□□□□ -1.02
SNX1-212ENST00000560861 SCGB2A1O75556 95 aa8.69□□□□□ -1.02
SNX1-212ENST00000560861 IGHV3-11P01762 117 aa8.69□□□□□ -1.02
SNX1-212ENST00000560861 IL4P05112 153 aa8.69□□□□□ -1.02
SNX1-212ENST00000560861 BCL2P10415 239 aa8.69□□□□□ -1.02
SNX1-212ENST00000560861 PSMB3P49720 205 aa8.69□□□□□ -1.02
SNX1-212ENST00000560861 KHDC3LQ587J8 217 aa8.69□□□□□ -1.02
SNX1-212ENST00000560861 PQLC2Q6ZP29 291 aa8.69□□□□□ -1.02
SNX1-212ENST00000560861 LINC00305Q7Z4B0 112 aa8.69□□□□□ -1.02
SNX1-212ENST00000560861 OR4X2Q8NGF9 303 aa8.69□□□□□ -1.02
SNX1-212ENST00000560861 RARRES2Q99969 163 aa8.69□□□□□ -1.02
SNX1-212ENST00000560861 SLC25A39Q9BZJ4 359 aaPredicted RBP8.69□□□□□ -1.02
SNX1-212ENST00000560861 TMEM231Q9H6L2 316 aa8.69□□□□□ -1.02
SNX1-212ENST00000560861 GNB4Q9HAV0 340 aa8.69□□□□□ -1.02
SNX1-212ENST00000560861 PUS1Q9Y606 427 aaKnown RBP eCLIP8.69□□□□□ -1.02
SNX1-212ENST00000560861 ANKRD34BA5PLL1 514 aa8.68□□□□□ -1.02
SNX1-212ENST00000560861 NDUFS6O75380 124 aaKnown RBP8.68□□□□□ -1.02
SNX1-212ENST00000560861 GP9P14770 177 aa8.68□□□□□ -1.02
SNX1-212ENST00000560861 ARL3P36405 182 aa8.68□□□□□ -1.02
SNX1-212ENST00000560861 TAS2R45P59539 299 aa8.68□□□□□ -1.02
SNX1-212ENST00000560861 HAGHQ16775 308 aa8.68□□□□□ -1.02
SNX1-212ENST00000560861 FAM209BQ5JX69 171 aa8.68□□□□□ -1.02
SNX1-212ENST00000560861 KLHDC1Q8N7A1 406 aa8.68□□□□□ -1.02
SNX1-212ENST00000560861 OR5AU1Q8NGC0 362 aa8.68□□□□□ -1.02
SNX1-212ENST00000560861 LINC01006Q8NI28 216 aa8.68□□□□□ -1.02
SNX1-212ENST00000560861 UBE2E2Q96LR5 201 aa8.68□□□□□ -1.02
SNX1-212ENST00000560861 PBDC1Q9BVG4 233 aa8.68□□□□□ -1.02
SNX1-212ENST00000560861 SMDT1Q9H4I9 107 aa8.68□□□□□ -1.02
SNX1-212ENST00000560861 TMEM14CQ9P0S9 112 aa8.68□□□□□ -1.02
SNX1-212ENST00000560861 GNG13Q9P2W3 67 aa8.68□□□□□ -1.02
SNX1-212ENST00000560861 U3KQE9 123 aa8.68□□□□□ -1.02
SNX1-212ENST00000560861 TMEM218A2RU14 115 aa8.67□□□□□ -1.02
SNX1-212ENST00000560861 NDUFA4O00483 81 aa8.67□□□□□ -1.02
SNX1-212ENST00000560861 SRP19P09132 144 aaKnown RBP8.67□□□□□ -1.02
SNX1-212ENST00000560861 LGALS1P09382 135 aaKnown RBP8.67□□□□□ -1.02
SNX1-212ENST00000560861 ADCYAP1P18509 176 aa8.67□□□□□ -1.02
SNX1-212ENST00000560861 S100A1P23297 94 aa8.67□□□□□ -1.02
SNX1-212ENST00000560861 PPT1P50897 306 aa8.67□□□□□ -1.02
SNX1-212ENST00000560861 RELQ04864 619 aaPredicted RBP8.67□□□□□ -1.02
SNX1-212ENST00000560861 PEA15Q15121 130 aa8.67□□□□□ -1.02
SNX1-212ENST00000560861 JMJD1CQ15652 2540 aa8.67□□□□□ -1.02
SNX1-212ENST00000560861 C10orf91Q5T1B1 145 aa8.67□□□□□ -1.02
SNX1-212ENST00000560861 FXYD5Q96DB9 178 aa8.67□□□□□ -1.02
SNX1-212ENST00000560861 LINC00052Q96N35 136 aa8.67□□□□□ -1.02
SNX1-212ENST00000560861 MANBALQ9NQG1 85 aa8.67□□□□□ -1.02
SNX1-212ENST00000560861 PEF1Q9UBV8 284 aaKnown RBP8.67□□□□□ -1.02
SNX1-212ENST00000560861 ARL2-SNX15V9GYD0 113 aa8.67□□□□□ -1.02
SNX1-212ENST00000560861 IGHV3-35A0A0C4DH35 117 aa8.66□□□□□ -1.02
SNX1-212ENST00000560861 I3L521 148 aa8.66□□□□□ -1.02
SNX1-212ENST00000560861 TCF21O43680 179 aa8.66□□□□□ -1.02
SNX1-212ENST00000560861 IFNA1P01562 189 aa8.66□□□□□ -1.02
SNX1-212ENST00000560861 HSPB1P04792 205 aaKnown RBP8.66□□□□□ -1.02
SNX1-212ENST00000560861 CRYBA1P05813 215 aa8.66□□□□□ -1.02
SNX1-212ENST00000560861 PYYP10082 97 aa8.66□□□□□ -1.02
SNX1-212ENST00000560861 ZP3P21754 424 aa8.66□□□□□ -1.02
SNX1-212ENST00000560861 TAGLN2P37802 199 aaKnown RBP8.66□□□□□ -1.02
SNX1-212ENST00000560861 CDX1P47902 265 aaPredicted RBP8.66□□□□□ -1.02
SNX1-212ENST00000560861 CD81P60033 236 aa8.66□□□□□ -1.02
SNX1-212ENST00000560861 LEMD1Q68G75 181 aa8.66□□□□□ -1.02
SNX1-212ENST00000560861 RXFP4Q8TDU9 374 aa8.66□□□□□ -1.02
SNX1-212ENST00000560861 TMEM190Q8WZ59 177 aa8.66□□□□□ -1.02
SNX1-212ENST00000560861 OR51M1Q9H341 326 aa8.66□□□□□ -1.02
SNX1-212ENST00000560861 TMEM167BQ9NRX6 74 aa8.66□□□□□ -1.02
SNX1-212ENST00000560861 VAX2Q9UIW0 290 aa8.66□□□□□ -1.02
SNX1-212ENST00000560861 YTHDF2Q9Y5A9 579 aaKnown RBP8.66□□□□□ -1.02
SNX1-212ENST00000560861 ZNF98A6NK75 572 aa8.65□□□□□ -1.02
SNX1-212ENST00000560861 FAM74A7A6NL05 159 aa8.65□□□□□ -1.02
SNX1-212ENST00000560861 KRBOX1C9JBD0 128 aa8.65□□□□□ -1.02
SNX1-212ENST00000560861 OR7C2O60412 319 aa8.65□□□□□ -1.02
SNX1-212ENST00000560861 PAGE4O60829 102 aa8.65□□□□□ -1.02
SNX1-212ENST00000560861 GGCTO75223 188 aaKnown RBP8.65□□□□□ -1.02
SNX1-212ENST00000560861 IGLC2P0DOY2 106 aa8.65□□□□□ -1.02
SNX1-212ENST00000560861 CRYBB3P26998 211 aa8.65□□□□□ -1.02
SNX1-212ENST00000560861 MYCNOSP40205 109 aa8.65□□□□□ -1.02
SNX1-212ENST00000560861 PROK1P58294 105 aa8.65□□□□□ -1.02
SNX1-212ENST00000560861 UBE2L3P68036 154 aaKnown RBP8.65□□□□□ -1.02
SNX1-212ENST00000560861 UNQ9165/PRO28630Q6UXU0 137 aa8.65□□□□□ -1.02
SNX1-212ENST00000560861 C18orf65Q6ZTR6 163 aa8.65□□□□□ -1.02
SNX1-212ENST00000560861 STXBP6Q8NFX7 210 aa8.65□□□□□ -1.02
SNX1-212ENST00000560861 WFDC12Q8WWY7 111 aa8.65□□□□□ -1.02
SNX1-212ENST00000560861 C17orf77Q96MU5 243 aa8.65□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms