RNA–Protein interactions for RNA: ENST00000559329.5

USP8-208, Transcript of ubiquitin specific peptidase 8, humanhuman

TSL 1 (best)

Gene USP8, Length 1,917 nt, Biotype non stop decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP8-208ENST00000559329 Q9H3A6 140 aa12.52□□□□□ -0.41
USP8-208ENST00000559329 ZNF586Q9NXT0 402 aa12.52□□□□□ -0.41
USP8-208ENST00000559329 KLK9Q9UKQ9 250 aa12.52□□□□□ -0.41
USP8-208ENST00000559329 CENPVL3A0A0U1RRI6 287 aa12.51□□□□□ -0.41
USP8-208ENST00000559329 SMIM27A0A1W2PRY6 76 aa12.51□□□□□ -0.41
USP8-208ENST00000559329 HIST1H1EP10412 219 aaKnown RBP12.51□□□□□ -0.41
USP8-208ENST00000559329 MFAP4P55083 255 aa12.51□□□□□ -0.41
USP8-208ENST00000559329 NHLRC2Q8NBF2 726 aa12.51□□□□□ -0.41
USP8-208ENST00000559329 OR10D4PQ8NGN7 298 aa12.51□□□□□ -0.41
USP8-208ENST00000559329 C10orf105Q8TEF2 133 aa12.51□□□□□ -0.41
USP8-208ENST00000559329 MBD6Q96DN6 1003 aa12.51□□□□□ -0.41
USP8-208ENST00000559329 RNF125Q96EQ8 232 aa12.51□□□□□ -0.41
USP8-208ENST00000559329 SMIM12Q96EX1 92 aa12.51□□□□□ -0.41
USP8-208ENST00000559329 TMEM68Q96MH6 324 aa12.51□□□□□ -0.41
USP8-208ENST00000559329 ATG101Q9BSB4 218 aa12.51□□□□□ -0.41
USP8-208ENST00000559329 NIT2Q9NQR4 276 aa12.51□□□□□ -0.41
USP8-208ENST00000559329 OR8I2Q8N0Y5 310 aa12.5□□□□□ -0.41
USP8-208ENST00000559329 HSPB9Q9BQS6 159 aa12.5□□□□□ -0.41
USP8-208ENST00000559329 PIMREGQ9BSJ6 248 aa12.5□□□□□ -0.41
USP8-208ENST00000559329 FLNCQ14315 2725 aa12.5□□□□□ -0.41
USP8-208ENST00000559329 IGHV4-61A0A0C4DH41 118 aa12.5□□□□□ -0.41
USP8-208ENST00000559329 H3BTX0 84 aa12.5□□□□□ -0.41
USP8-208ENST00000559329 MRPS12O15235 138 aaKnown RBP12.5□□□□□ -0.41
USP8-208ENST00000559329 GNG7O60262 68 aa12.5□□□□□ -0.41
USP8-208ENST00000559329 NDUFB8O95169 186 aa12.5□□□□□ -0.41
USP8-208ENST00000559329 TCRAP04437 139 aa12.5□□□□□ -0.41
USP8-208ENST00000559329 IL4P05112 153 aa12.5□□□□□ -0.41
USP8-208ENST00000559329 FABP4P15090 132 aa12.5□□□□□ -0.41
USP8-208ENST00000559329 TMEM190Q8WZ59 177 aa12.5□□□□□ -0.41
USP8-208ENST00000559329 FAM168AQ92567 244 aa12.5□□□□□ -0.41
USP8-208ENST00000559329 MLST8Q9BVC4 326 aa12.5□□□□□ -0.41
USP8-208ENST00000559329 OTORQ9NRC9 128 aa12.5□□□□□ -0.41
USP8-208ENST00000559329 C21orf62Q9NYP8 219 aa12.5□□□□□ -0.41
USP8-208ENST00000559329 S4R3C0 116 aa12.5□□□□□ -0.41
USP8-208ENST00000559329 USP9XQ93008 2570 aaPredicted RBP12.49□□□□□ -0.41
USP8-208ENST00000559329 NDUFS8O00217 210 aa12.49□□□□□ -0.41
USP8-208ENST00000559329 FRMD6-AS1P0C7T7 363 aa12.49□□□□□ -0.41
USP8-208ENST00000559329 IGLC2P0DOY2 106 aa12.49□□□□□ -0.41
USP8-208ENST00000559329 CBLN1P23435 193 aa12.49□□□□□ -0.41
USP8-208ENST00000559329 FCGR2BP31994 310 aaPredicted RBP12.49□□□□□ -0.41
USP8-208ENST00000559329 THYN1Q9P016 225 aa12.49□□□□□ -0.41
USP8-208ENST00000559329 AMBPP02760 352 aa12.49□□□□□ -0.41
USP8-208ENST00000559329 ADMP35318 185 aa12.49□□□□□ -0.41
USP8-208ENST00000559329 UBE2G1P62253 170 aa12.49□□□□□ -0.41
USP8-208ENST00000559329 USF2Q15853 346 aaPredicted RBP12.49□□□□□ -0.41
USP8-208ENST00000559329 FMC1Q96HJ9 113 aa12.49□□□□□ -0.41
USP8-208ENST00000559329 PACRGQ96M98 296 aaPredicted RBP12.49□□□□□ -0.41
USP8-208ENST00000559329 SPOCK3Q9BQ16 436 aa12.49□□□□□ -0.41
USP8-208ENST00000559329 TRBV19A0A075B6N1 114 aa12.48□□□□□ -0.41
USP8-208ENST00000559329 TRBV9A0A0B4J1U6 114 aa12.48□□□□□ -0.41
USP8-208ENST00000559329 LTAP01374 205 aa12.48□□□□□ -0.41
USP8-208ENST00000559329 BPIFA4PQ86YQ2 179 aa12.48□□□□□ -0.41
USP8-208ENST00000559329 FAM110DQ8TAY7 271 aaPredicted RBP12.48□□□□□ -0.41
USP8-208ENST00000559329 GPR82Q96P67 336 aa12.48□□□□□ -0.41
USP8-208ENST00000559329 GNB1LQ9BYB4 327 aa12.48□□□□□ -0.41
USP8-208ENST00000559329 SPTAN1Q13813 2472 aaKnown RBP12.48□□□□□ -0.41
USP8-208ENST00000559329 USP24Q9UPU5 2620 aa12.48□□□□□ -0.41
USP8-208ENST00000559329 COL12A1Q99715 3063 aa12.47□□□□□ -0.41
USP8-208ENST00000559329 ZNF705GA8MUZ8 300 aaPredicted RBP12.47□□□□□ -0.41
USP8-208ENST00000559329 OR2J3O76001 311 aa12.47□□□□□ -0.41
USP8-208ENST00000559329 MRPL18Q9H0U6 180 aaKnown RBP12.47□□□□□ -0.41
USP8-208ENST00000559329 SVEP1Q4LDE5 3571 aa12.47□□□□□ -0.41
USP8-208ENST00000559329 Q56UQ5 140 aa12.47□□□□□ -0.41
USP8-208ENST00000559329 DNLZQ5SXM8 178 aa12.47□□□□□ -0.41
USP8-208ENST00000559329 BCL6BQ8N143 479 aaPredicted RBP12.47□□□□□ -0.41
USP8-208ENST00000559329 NUDT10Q8NFP7 164 aa12.47□□□□□ -0.41
USP8-208ENST00000559329 NUDT11Q96G61 164 aa12.47□□□□□ -0.41
USP8-208ENST00000559329 TXN2Q99757 166 aa12.47□□□□□ -0.41
USP8-208ENST00000559329 GSN-AS1Q9NRJ2 163 aa12.47□□□□□ -0.41
USP8-208ENST00000559329 RNF24Q9Y225 148 aa12.47□□□□□ -0.41
USP8-208ENST00000559329 ATP6V0E1O15342 81 aa12.46□□□□□ -0.42
USP8-208ENST00000559329 CA1P00915 261 aaPredicted RBP12.46□□□□□ -0.42
USP8-208ENST00000559329 CTSGP08311 255 aa12.46□□□□□ -0.42
USP8-208ENST00000559329 IER3P46695 156 aa12.46□□□□□ -0.42
USP8-208ENST00000559329 TCL1AP56279 114 aa12.46□□□□□ -0.42
USP8-208ENST00000559329 SIGLEC15Q6ZMC9 328 aa12.46□□□□□ -0.42
USP8-208ENST00000559329 EXOC3-AS1Q8N2X6 119 aa12.46□□□□□ -0.42
USP8-208ENST00000559329 VN1R17PQ8TDU5 208 aa12.46□□□□□ -0.42
USP8-208ENST00000559329 GRAMD2BQ96HH9 432 aa12.46□□□□□ -0.42
USP8-208ENST00000559329 ZNF414Q96IQ9 312 aa12.46□□□□□ -0.42
USP8-208ENST00000559329 SERTAD4Q9NUC0 356 aa12.46□□□□□ -0.42
USP8-208ENST00000559329 FBXL7Q9UJT9 491 aa12.46□□□□□ -0.42
USP8-208ENST00000559329 IGHV1-69DA0A0B4J2H0 117 aa12.45□□□□□ -0.42
USP8-208ENST00000559329 TRBV6-1A0A0K0K1D8 114 aa12.45□□□□□ -0.42
USP8-208ENST00000559329 GATCO43716 136 aaKnown RBP12.45□□□□□ -0.42
USP8-208ENST00000559329 IGLV2-11P01706 119 aa12.45□□□□□ -0.42
USP8-208ENST00000559329 IGHV1-69P01742 117 aa12.45□□□□□ -0.42
USP8-208ENST00000559329 COX19Q49B96 90 aa12.45□□□□□ -0.42
USP8-208ENST00000559329 CLEC2AQ6UVW9 174 aa12.45□□□□□ -0.42
USP8-208ENST00000559329 LYPD1Q8N2G4 141 aa12.45□□□□□ -0.42
USP8-208ENST00000559329 C5orf56Q8N8D9 126 aa12.45□□□□□ -0.42
USP8-208ENST00000559329 OR4F17Q8NGA8 305 aa12.45□□□□□ -0.42
USP8-208ENST00000559329 SGK494Q96LW2 274 aa12.45□□□□□ -0.42
USP8-208ENST00000559329 RPH3ALQ9UNE2 315 aa12.45□□□□□ -0.42
USP8-208ENST00000559329 CSMD1Q96PZ7 3565 aa12.45□□□□□ -0.42
USP8-208ENST00000559329 IGHV4-30-2A0A087WSY4 118 aa12.45□□□□□ -0.42
USP8-208ENST00000559329 IZUMO1RA6ND01 250 aa12.45□□□□□ -0.42
USP8-208ENST00000559329 SNURFLB1AK76 121 aa12.45□□□□□ -0.42
USP8-208ENST00000559329 MT-ND6P03923 174 aa12.45□□□□□ -0.42
USP8-208ENST00000559329 ATP5J2P56134 94 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms