RNA–Protein interactions for RNA: ENST00000558911.1

LRRC28-212, Transcript of leucine rich repeat containing 28, humanhuman

TSL 3

Gene LRRC28, Length 490 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-212ENST00000558911 IGKV1D-33P01593 117 aa2.21□□□□□ -2.06
LRRC28-212ENST00000558911 IGKV1-33P01594 117 aa2.21□□□□□ -2.06
LRRC28-212ENST00000558911 APOC1P02654 83 aa2.21□□□□□ -2.06
LRRC28-212ENST00000558911 SRP19P09132 144 aaKnown RBP2.21□□□□□ -2.06
LRRC28-212ENST00000558911 IL1RNP18510 177 aa2.21□□□□□ -2.06
LRRC28-212ENST00000558911 GABRA2P47869 451 aa2.21□□□□□ -2.06
LRRC28-212ENST00000558911 TAS2R45P59539 299 aa2.21□□□□□ -2.06
LRRC28-212ENST00000558911 TBPL1P62380 186 aa2.21□□□□□ -2.06
LRRC28-212ENST00000558911 FKBP1AP62942 108 aaKnown RBP2.21□□□□□ -2.06
LRRC28-212ENST00000558911 IQGAP2Q13576 1575 aa2.21□□□□□ -2.06
LRRC28-212ENST00000558911 HTR4Q13639 388 aa2.21□□□□□ -2.06
LRRC28-212ENST00000558911 NDUFA5Q16718 116 aa2.21□□□□□ -2.06
LRRC28-212ENST00000558911 SCGB2B2Q4G0G5 96 aa2.21□□□□□ -2.06
LRRC28-212ENST00000558911 AGTRAPQ6RW13 159 aa2.21□□□□□ -2.06
LRRC28-212ENST00000558911 HRCT1Q6UXD1 115 aa2.21□□□□□ -2.06
LRRC28-212ENST00000558911 ANGPTL5Q86XS5 388 aa2.21□□□□□ -2.06
LRRC28-212ENST00000558911 FANCMQ8IYD8 2048 aa2.21□□□□□ -2.06
LRRC28-212ENST00000558911 ZNF101Q8IZC7 436 aa2.21□□□□□ -2.06
LRRC28-212ENST00000558911 TMEM86AQ8N2M4 240 aa2.21□□□□□ -2.06
LRRC28-212ENST00000558911 ZNF709Q8N972 641 aa2.21□□□□□ -2.06
LRRC28-212ENST00000558911 OR10D4PQ8NGN7 298 aa2.21□□□□□ -2.06
LRRC28-212ENST00000558911 SLC25A46Q96AG3 418 aa2.21□□□□□ -2.06
LRRC28-212ENST00000558911 TOMM6Q96B49 74 aa2.21□□□□□ -2.06
LRRC28-212ENST00000558911 TMEM126AQ9H061 195 aa2.21□□□□□ -2.06
LRRC28-212ENST00000558911 OR2D2Q9H210 308 aa2.21□□□□□ -2.06
LRRC28-212ENST00000558911 CACYBPQ9HB71 228 aaKnown RBP2.21□□□□□ -2.06
LRRC28-212ENST00000558911 HSPB8Q9UJY1 196 aa2.21□□□□□ -2.06
LRRC28-212ENST00000558911 TRAPPC2LQ9UL33 140 aa2.21□□□□□ -2.06
LRRC28-212ENST00000558911 TMEM14AQ9Y6G1 99 aa2.21□□□□□ -2.06
LRRC28-212ENST00000558911 SPEF2Q9C093 1822 aa2.21□□□□□ -2.06
LRRC28-212ENST00000558911 COL1A2P08123 1366 aa2.21□□□□□ -2.06
LRRC28-212ENST00000558911 ATG2BQ96BY7 2078 aa2.21□□□□□ -2.06
LRRC28-212ENST00000558911 ZNF518AQ6AHZ1 1483 aa2.2□□□□□ -2.06
LRRC28-212ENST00000558911 DSCAMO60469 2012 aa2.2□□□□□ -2.06
LRRC28-212ENST00000558911 CCDC171Q6TFL3 1326 aa2.2□□□□□ -2.06
LRRC28-212ENST00000558911 NUP210Q8TEM1 1887 aaPredicted RBP2.2□□□□□ -2.06
LRRC28-212ENST00000558911 TROQ12816 1431 aaPredicted RBP2.2□□□□□ -2.06
LRRC28-212ENST00000558911 IGHV3-21A0A0B4J1V1 117 aa2.2□□□□□ -2.06
LRRC28-212ENST00000558911 A0A1B0GX51 115 aa2.2□□□□□ -2.06
LRRC28-212ENST00000558911 TMEM189A5PLL7 270 aa2.2□□□□□ -2.06
LRRC28-212ENST00000558911 CCDC160A6NGH7 325 aa2.2□□□□□ -2.06
LRRC28-212ENST00000558911 K7EP13 123 aa2.2□□□□□ -2.06
LRRC28-212ENST00000558911 BCL2L11O43521 198 aa2.2□□□□□ -2.06
LRRC28-212ENST00000558911 ZNF73O43830 326 aaPredicted RBP2.2□□□□□ -2.06
LRRC28-212ENST00000558911 FAM107AO95990 144 aa2.2□□□□□ -2.06
LRRC28-212ENST00000558911 IGKV1-5P01602 117 aa2.2□□□□□ -2.06
LRRC28-212ENST00000558911 IGLV1-47P01700 117 aa2.2□□□□□ -2.06
LRRC28-212ENST00000558911 C1QCP02747 245 aa2.2□□□□□ -2.06
LRRC28-212ENST00000558911 HTR1AP08908 422 aa2.2□□□□□ -2.06
LRRC28-212ENST00000558911 PTHLHP12272 177 aa2.2□□□□□ -2.06
LRRC28-212ENST00000558911 OGNP20774 298 aaKnown RBP2.2□□□□□ -2.06
LRRC28-212ENST00000558911 ATP6V0CP27449 155 aa2.2□□□□□ -2.06
LRRC28-212ENST00000558911 SRIP30626 198 aa2.2□□□□□ -2.06
LRRC28-212ENST00000558911 LPAR6P43657 344 aa2.2□□□□□ -2.06
LRRC28-212ENST00000558911 PSG7Q13046 419 aa2.2□□□□□ -2.06
LRRC28-212ENST00000558911 FKBP1CQ5VVH2 108 aa2.2□□□□□ -2.06
LRRC28-212ENST00000558911 SSX8Q7RTT4 187 aa2.2□□□□□ -2.06
LRRC28-212ENST00000558911 KTN1-AS1Q86SY8 53 aa2.2□□□□□ -2.06
LRRC28-212ENST00000558911 C11orf42Q8N5U0 333 aa2.2□□□□□ -2.06
LRRC28-212ENST00000558911 ZFP62Q8NB50 900 aaPredicted RBP2.2□□□□□ -2.06
LRRC28-212ENST00000558911 RPS4Y2Q8TD47 263 aa2.2□□□□□ -2.06
LRRC28-212ENST00000558911 H1FXQ92522 213 aaKnown RBP2.2□□□□□ -2.06
LRRC28-212ENST00000558911 RMI2Q96E14 147 aa2.2□□□□□ -2.06
LRRC28-212ENST00000558911 NDFIP1Q9BT67 221 aa2.2□□□□□ -2.06
LRRC28-212ENST00000558911 OR2J1Q9GZK6 312 aa2.2□□□□□ -2.06
LRRC28-212ENST00000558911 C20orf27Q9GZN8 174 aa2.2□□□□□ -2.06
LRRC28-212ENST00000558911 FUT9Q9Y231 359 aa2.2□□□□□ -2.06
LRRC28-212ENST00000558911 MYH7BA7E2Y1 1941 aa2.2□□□□□ -2.06
LRRC28-212ENST00000558911 DENND4CQ5VZ89 1909 aa2.2□□□□□ -2.06
LRRC28-212ENST00000558911 SIPA1L1O43166 1804 aa2.19□□□□□ -2.06
LRRC28-212ENST00000558911 MAP2P11137 1827 aaKnown RBP2.19□□□□□ -2.06
LRRC28-212ENST00000558911 ACACAQ13085 2346 aa2.19□□□□□ -2.06
LRRC28-212ENST00000558911 A0A096LNJ9 63 aa2.19□□□□□ -2.06
LRRC28-212ENST00000558911 TRBV6-6A0A0A6YYG2 114 aa2.19□□□□□ -2.06
LRRC28-212ENST00000558911 BORCS7-ASMTA0A0B4J1R7 106 aa2.19□□□□□ -2.06
LRRC28-212ENST00000558911 TMEM269A0A1B0GVZ9 245 aa2.19□□□□□ -2.06
LRRC28-212ENST00000558911 DUXBA0A1W2PPF3 345 aa2.19□□□□□ -2.06
LRRC28-212ENST00000558911 LEUTXA8MZ59 168 aa2.19□□□□□ -2.06
LRRC28-212ENST00000558911 MIF4GDA9UHW6 222 aaKnown RBP2.19□□□□□ -2.06
LRRC28-212ENST00000558911 C1orf196B1AJZ1 125 aa2.19□□□□□ -2.06
LRRC28-212ENST00000558911 H7BYZ3 331 aa2.19□□□□□ -2.06
LRRC28-212ENST00000558911 BET1O15155 118 aa2.19□□□□□ -2.06
LRRC28-212ENST00000558911 RBFOX2O43251 390 aaKnown RBP eCLIP2.19□□□□□ -2.06
LRRC28-212ENST00000558911 SULT1C4O75897 302 aa2.19□□□□□ -2.06
LRRC28-212ENST00000558911 IGHV1-46P01743 117 aa2.19□□□□□ -2.06
LRRC28-212ENST00000558911 LINC00869P0C866 280 aa2.19□□□□□ -2.06
LRRC28-212ENST00000558911 UBBP0CG47 229 aa2.19□□□□□ -2.06
LRRC28-212ENST00000558911 NTF3P20783 257 aa2.19□□□□□ -2.06
LRRC28-212ENST00000558911 HIST1H2BOP23527 126 aa2.19□□□□□ -2.06
LRRC28-212ENST00000558911 CRYBB3P26998 211 aa2.19□□□□□ -2.06
LRRC28-212ENST00000558911 SDC4P31431 198 aa2.19□□□□□ -2.06
LRRC28-212ENST00000558911 HIST1H2BBP33778 126 aa2.19□□□□□ -2.06
LRRC28-212ENST00000558911 HIST1H2BDP58876 126 aa2.19□□□□□ -2.06
LRRC28-212ENST00000558911 DNAJB13P59910 316 aa2.19□□□□□ -2.06
LRRC28-212ENST00000558911 RPS11P62280 158 aaKnown RBP eCLIP2.19□□□□□ -2.06
LRRC28-212ENST00000558911 HIST1H2BCP62807 126 aa2.19□□□□□ -2.06
LRRC28-212ENST00000558911 RPL30P62888 115 aaKnown RBP2.19□□□□□ -2.06
LRRC28-212ENST00000558911 HIST2H2BEQ16778 126 aa2.19□□□□□ -2.06
LRRC28-212ENST00000558911 DEFB116Q30KQ4 102 aa2.19□□□□□ -2.06
LRRC28-212ENST00000558911 LGALS9BQ3B8N2 356 aa2.19□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms