RNA–Protein interactions for RNA: ENST00000558847.1

CASC4-206, Transcript of cancer susceptibility 4, humanhuman

TSL 3

Gene CASC4, Length 622 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-206ENST00000558847 RP1L1Q8IWN7 2480 aaPredicted RBP1.48□□□□□ -2.17
CASC4-206ENST00000558847 PCDH15Q96QU1 1955 aa1.48□□□□□ -2.17
CASC4-206ENST00000558847 SCN10AQ9Y5Y9 1956 aa1.48□□□□□ -2.17
CASC4-206ENST00000558847 RP1P56715 2156 aa1.48□□□□□ -2.17
CASC4-206ENST00000558847 UHRF1BP1Q6BDS2 1440 aa1.48□□□□□ -2.17
CASC4-206ENST00000558847 CCDC88AQ3V6T2 1871 aa1.48□□□□□ -2.17
CASC4-206ENST00000558847 ZNF106Q9H2Y7 1883 aaKnown RBP1.48□□□□□ -2.17
CASC4-206ENST00000558847 RIMBP3CA6NJZ7 1639 aa1.48□□□□□ -2.17
CASC4-206ENST00000558847 RIMBP3BA6NNM3 1639 aa1.48□□□□□ -2.17
CASC4-206ENST00000558847 RIMBP3Q9UFD9 1639 aa1.48□□□□□ -2.17
CASC4-206ENST00000558847 ALPK2Q86TB3 2170 aa1.47□□□□□ -2.17
CASC4-206ENST00000558847 TMEM238C9JI98 176 aa1.47□□□□□ -2.17
CASC4-206ENST00000558847 HLA-EP13747 358 aa1.47□□□□□ -2.17
CASC4-206ENST00000558847 OGNP20774 298 aaKnown RBP1.47□□□□□ -2.17
CASC4-206ENST00000558847 GNG3P63215 75 aa1.47□□□□□ -2.17
CASC4-206ENST00000558847 C2orf82Q6UX34 121 aa1.47□□□□□ -2.17
CASC4-206ENST00000558847 NUP35Q8NFH5 326 aa1.47□□□□□ -2.17
CASC4-206ENST00000558847 OR2T35Q8NGX2 323 aa1.47□□□□□ -2.17
CASC4-206ENST00000558847 LAMTOR3Q9UHA4 124 aa1.47□□□□□ -2.17
CASC4-206ENST00000558847 SBF1O95248 1867 aa1.46□□□□□ -2.18
CASC4-206ENST00000558847 LOC110117498A0A087WWA1 95 aa1.46□□□□□ -2.18
CASC4-206ENST00000558847 PIAS1O75925 651 aa1.46□□□□□ -2.18
CASC4-206ENST00000558847 NFYBP25208 207 aa1.46□□□□□ -2.18
CASC4-206ENST00000558847 PPP1R2P41236 205 aa1.46□□□□□ -2.18
CASC4-206ENST00000558847 DYNLT3P51808 116 aa1.46□□□□□ -2.18
CASC4-206ENST00000558847 SOSTDC1Q6X4U4 206 aa1.46□□□□□ -2.18
CASC4-206ENST00000558847 OR10K1Q8NGX5 313 aa1.46□□□□□ -2.18
CASC4-206ENST00000558847 ZNF418Q8TF45 676 aaPredicted RBP1.46□□□□□ -2.18
CASC4-206ENST00000558847 LINC00526Q96FQ7 95 aa1.46□□□□□ -2.18
CASC4-206ENST00000558847 NPCDR1Q9BY65 106 aa1.46□□□□□ -2.18
CASC4-206ENST00000558847 GID8Q9NWU2 228 aa1.46□□□□□ -2.18
CASC4-206ENST00000558847 MED29Q9NX70 200 aa1.46□□□□□ -2.18
CASC4-206ENST00000558847 KDM6AO15550 1401 aaPredicted RBP1.46□□□□□ -2.18
CASC4-206ENST00000558847 ANAPC1Q9H1A4 1944 aa1.46□□□□□ -2.18
CASC4-206ENST00000558847 PLXND1Q9Y4D7 1925 aa1.46□□□□□ -2.18
CASC4-206ENST00000558847 INTS1Q8N201 2190 aaKnown RBP1.45□□□□□ -2.18
CASC4-206ENST00000558847 TRBV6-8A0A0A6YYG3 113 aa1.45□□□□□ -2.18
CASC4-206ENST00000558847 C17orf112F2Z3M2 114 aa1.45□□□□□ -2.18
CASC4-206ENST00000558847 TMEM256-PLSCR3K7ERE1 68 aa1.45□□□□□ -2.18
CASC4-206ENST00000558847 M0R2N4 97 aa1.45□□□□□ -2.18
CASC4-206ENST00000558847 ZNF93P35789 620 aaPredicted RBP1.45□□□□□ -2.18
CASC4-206ENST00000558847 TRIQKQ629K1 86 aa1.45□□□□□ -2.18
CASC4-206ENST00000558847 GRINAQ7Z429 371 aa1.45□□□□□ -2.18
CASC4-206ENST00000558847 STX19Q8N4C7 294 aa1.45□□□□□ -2.18
CASC4-206ENST00000558847 PPTC7Q8NI37 304 aa1.45□□□□□ -2.18
CASC4-206ENST00000558847 POPDC3Q9HBV1 291 aa1.45□□□□□ -2.18
CASC4-206ENST00000558847 PCTPQ9UKL6 214 aa1.45□□□□□ -2.18
CASC4-206ENST00000558847 V9GYQ6 96 aa1.45□□□□□ -2.18
CASC4-206ENST00000558847 MED12LQ86YW9 2145 aa1.45□□□□□ -2.18
CASC4-206ENST00000558847 FCGBPQ9Y6R7 5405 aaPredicted RBP1.45□□□□□ -2.18
CASC4-206ENST00000558847 PRRC2BQ5JSZ5 2229 aaKnown RBP1.44□□□□□ -2.18
CASC4-206ENST00000558847 TNS3Q68CZ2 1445 aa1.44□□□□□ -2.18
CASC4-206ENST00000558847 YTHDC2Q9H6S0 1430 aaKnown RBP1.44□□□□□ -2.18
CASC4-206ENST00000558847 TRAV5A0A0B4J249 113 aa1.44□□□□□ -2.18
CASC4-206ENST00000558847 TCRBV4S1A1TA0A5B7 111 aa1.44□□□□□ -2.18
CASC4-206ENST00000558847 PPP5D1E7EU14 171 aa1.44□□□□□ -2.18
CASC4-206ENST00000558847 PFDN1O60925 122 aa1.44□□□□□ -2.18
CASC4-206ENST00000558847 OR10J4P0C629 311 aa1.44□□□□□ -2.18
CASC4-206ENST00000558847 TAS2R41P59536 307 aa1.44□□□□□ -2.18
CASC4-206ENST00000558847 DEFB113Q30KQ7 82 aa1.44□□□□□ -2.18
CASC4-206ENST00000558847 PPP1R2P3Q6NXS1 205 aa1.44□□□□□ -2.18
CASC4-206ENST00000558847 C3orf33Q6P1S2 294 aa1.44□□□□□ -2.18
CASC4-206ENST00000558847 C4orf22Q6V702 233 aa1.44□□□□□ -2.18
CASC4-206ENST00000558847 CROCCP2Q86T23 111 aa1.44□□□□□ -2.18
CASC4-206ENST00000558847 EXOC3-AS1Q8N2X6 119 aa1.44□□□□□ -2.18
CASC4-206ENST00000558847 Q8N814 137 aa1.44□□□□□ -2.18
CASC4-206ENST00000558847 TP53RKQ96S44 253 aa1.44□□□□□ -2.18
CASC4-206ENST00000558847 UFC1Q9Y3C8 167 aa1.44□□□□□ -2.18
CASC4-206ENST00000558847 ARHGEF28Q8N1W1 1705 aaKnown RBP1.43□□□□□ -2.18
CASC4-206ENST00000558847 ARFGEF3Q5TH69 2177 aa1.43□□□□□ -2.18
CASC4-206ENST00000558847 MED13Q9UHV7 2174 aa1.43□□□□□ -2.18
CASC4-206ENST00000558847 TLCD2A6NGC4 264 aa1.43□□□□□ -2.18
CASC4-206ENST00000558847 ZNF736B4DX44 427 aaPredicted RBP1.43□□□□□ -2.18
CASC4-206ENST00000558847 IFNA4P05014 189 aa1.43□□□□□ -2.18
CASC4-206ENST00000558847 FAM74A1Q5RGS3 127 aa1.43□□□□□ -2.18
CASC4-206ENST00000558847 TEX261Q6UWH6 196 aa1.43□□□□□ -2.18
CASC4-206ENST00000558847 STX12Q86Y82 276 aa1.43□□□□□ -2.18
CASC4-206ENST00000558847 Q8IYB0 196 aa1.43□□□□□ -2.18
CASC4-206ENST00000558847 CLECL1Q8IZS7 167 aa1.43□□□□□ -2.18
CASC4-206ENST00000558847 ST6GALNAC3Q8NDV1 305 aa1.43□□□□□ -2.18
CASC4-206ENST00000558847 NEK7Q8TDX7 302 aa1.43□□□□□ -2.18
CASC4-206ENST00000558847 ZNF431Q8TF32 576 aaPredicted RBP1.43□□□□□ -2.18
CASC4-206ENST00000558847 PLEKHB2Q96CS7 222 aa1.43□□□□□ -2.18
CASC4-206ENST00000558847 RTL8AQ9BWD3 113 aa1.43□□□□□ -2.18
CASC4-206ENST00000558847 U3KQ87 197 aa1.43□□□□□ -2.18
CASC4-206ENST00000558847 TAF1LQ8IZX4 1826 aa1.43□□□□□ -2.18
CASC4-206ENST00000558847 COL4A5P29400 1685 aa1.42□□□□□ -2.18
CASC4-206ENST00000558847 DIDO1Q9BTC0 2240 aaKnown RBP1.42□□□□□ -2.18
CASC4-206ENST00000558847 TRBV6-7A0A0A0MS04 114 aa1.42□□□□□ -2.18
CASC4-206ENST00000558847 CCDC160A6NGH7 325 aa1.42□□□□□ -2.18
CASC4-206ENST00000558847 INE1O15225 51 aa1.42□□□□□ -2.18
CASC4-206ENST00000558847 TRGC2P03986 189 aa1.42□□□□□ -2.18
CASC4-206ENST00000558847 IDO1P14902 403 aa1.42□□□□□ -2.18
CASC4-206ENST00000558847 SERPINB1P30740 379 aa1.42□□□□□ -2.18
CASC4-206ENST00000558847 GNG10P50151 68 aa1.42□□□□□ -2.18
CASC4-206ENST00000558847 DSCR4P56555 118 aaPredicted RBP1.42□□□□□ -2.18
CASC4-206ENST00000558847 VBP1P61758 197 aa1.42□□□□□ -2.18
CASC4-206ENST00000558847 CNBPP62633 177 aaKnown RBP1.42□□□□□ -2.18
CASC4-206ENST00000558847 SNCBQ16143 134 aa1.42□□□□□ -2.18
CASC4-206ENST00000558847 FAM19A2Q8N3H0 131 aa1.42□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 144.8 ms