RNA–Protein interactions for RNA: ENST00000558059.5

SNRPA1-206, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 678 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-206ENST00000558059 RAB40CQ96S21 281 aa6.41□□□□□ -1.38
SNRPA1-206ENST00000558059 RARRES2Q99969 163 aa6.41□□□□□ -1.38
SNRPA1-206ENST00000558059 PBDC1Q9BVG4 233 aa6.41□□□□□ -1.38
SNRPA1-206ENST00000558059 SEPSECSQ9HD40 501 aaKnown RBP6.41□□□□□ -1.38
SNRPA1-206ENST00000558059 NRN1Q9NPD7 142 aa6.41□□□□□ -1.38
SNRPA1-206ENST00000558059 STRAPQ9Y3F4 350 aaKnown RBP6.41□□□□□ -1.38
SNRPA1-206ENST00000558059 VPS13DQ5THJ4 4388 aa6.41□□□□□ -1.38
SNRPA1-206ENST00000558059 TCRBP04435 133 aa6.4□□□□□ -1.38
SNRPA1-206ENST00000558059 FABP1P07148 127 aa6.4□□□□□ -1.38
SNRPA1-206ENST00000558059 LYZP61626 148 aa6.4□□□□□ -1.38
SNRPA1-206ENST00000558059 PSMG4Q5JS54 123 aa6.4□□□□□ -1.38
SNRPA1-206ENST00000558059 ACTL10Q5JWF8 245 aa6.4□□□□□ -1.38
SNRPA1-206ENST00000558059 C1orf194Q5T5A4 169 aa6.4□□□□□ -1.38
SNRPA1-206ENST00000558059 TMEM182Q6ZP80 229 aaPredicted RBP6.4□□□□□ -1.38
SNRPA1-206ENST00000558059 SMIM8Q96KF7 97 aa6.4□□□□□ -1.38
SNRPA1-206ENST00000558059 C20orf85Q9H1P6 137 aa6.4□□□□□ -1.38
SNRPA1-206ENST00000558059 PSENENQ9NZ42 101 aa6.4□□□□□ -1.38
SNRPA1-206ENST00000558059 TRAV6A0A075B6T7 132 aa6.39□□□□□ -1.39
SNRPA1-206ENST00000558059 CXorf65A6NEN9 183 aa6.39□□□□□ -1.39
SNRPA1-206ENST00000558059 SSSCA1O60232 199 aa6.39□□□□□ -1.39
SNRPA1-206ENST00000558059 CCNKO75909 580 aa6.39□□□□□ -1.39
SNRPA1-206ENST00000558059 SPP1P10451 314 aa6.39□□□□□ -1.39
SNRPA1-206ENST00000558059 C4BPBP20851 252 aa6.39□□□□□ -1.39
SNRPA1-206ENST00000558059 GATA2P23769 480 aaPredicted RBP6.39□□□□□ -1.39
SNRPA1-206ENST00000558059 NUP62P37198 522 aaPredicted RBP6.39□□□□□ -1.39
SNRPA1-206ENST00000558059 PMS2P11Q13670 270 aa6.39□□□□□ -1.39
SNRPA1-206ENST00000558059 IAH1Q2TAA2 248 aaPredicted RBP6.39□□□□□ -1.39
SNRPA1-206ENST00000558059 MORN3Q6PF18 240 aaPredicted RBP6.39□□□□□ -1.39
SNRPA1-206ENST00000558059 TMEM14EPQ6UXP3 125 aa6.39□□□□□ -1.39
SNRPA1-206ENST00000558059 LINC00299Q6ZSB3 139 aa6.39□□□□□ -1.39
SNRPA1-206ENST00000558059 ACOT7LQ6ZUV0 252 aa6.39□□□□□ -1.39
SNRPA1-206ENST00000558059 TMEM144Q7Z5S9 345 aa6.39□□□□□ -1.39
SNRPA1-206ENST00000558059 ZBTB8BQ8NAP8 495 aaPredicted RBP6.39□□□□□ -1.39
SNRPA1-206ENST00000558059 CCDC32Q9BV29 185 aa6.39□□□□□ -1.39
SNRPA1-206ENST00000558059 WDR12Q9GZL7 423 aaKnown RBP6.39□□□□□ -1.39
SNRPA1-206ENST00000558059 PFDN2Q9UHV9 154 aa6.39□□□□□ -1.39
SNRPA1-206ENST00000558059 RCL1Q9Y2P8 373 aaKnown RBP6.39□□□□□ -1.39
SNRPA1-206ENST00000558059 DNAH6Q9C0G6 4158 aa6.39□□□□□ -1.39
SNRPA1-206ENST00000558059 A6NHS1 94 aa6.38□□□□□ -1.39
SNRPA1-206ENST00000558059 H3BMM0 161 aa6.38□□□□□ -1.39
SNRPA1-206ENST00000558059 SOCS3O14543 225 aa6.38□□□□□ -1.39
SNRPA1-206ENST00000558059 CFDP00746 253 aaPredicted RBP6.38□□□□□ -1.39
SNRPA1-206ENST00000558059 MBPP02686 304 aaPredicted RBP6.38□□□□□ -1.39
SNRPA1-206ENST00000558059 DEFB1P60022 68 aa6.38□□□□□ -1.39
SNRPA1-206ENST00000558059 SNRPD3P62318 126 aaKnown RBP6.38□□□□□ -1.39
SNRPA1-206ENST00000558059 AKR1C1Q04828 323 aa6.38□□□□□ -1.39
SNRPA1-206ENST00000558059 TMEM41BQ5BJD5 291 aa6.38□□□□□ -1.39
SNRPA1-206ENST00000558059 CEMP1Q6PRD7 247 aaPredicted RBP6.38□□□□□ -1.39
SNRPA1-206ENST00000558059 GSG1LQ6UXU4 331 aa6.38□□□□□ -1.39
SNRPA1-206ENST00000558059 OR8I2Q8N0Y5 310 aa6.38□□□□□ -1.39
SNRPA1-206ENST00000558059 TMEM217Q8N7C4 229 aa6.38□□□□□ -1.39
SNRPA1-206ENST00000558059 CSNK1G2-AS1Q8NCQ2 148 aa6.38□□□□□ -1.39
SNRPA1-206ENST00000558059 BPIFCQ8NFQ6 507 aa6.38□□□□□ -1.39
SNRPA1-206ENST00000558059 C17orf77Q96MU5 243 aa6.38□□□□□ -1.39
SNRPA1-206ENST00000558059 SEC22CQ9BRL7 303 aa6.38□□□□□ -1.39
SNRPA1-206ENST00000558059 C11orf68Q9H3H3 251 aaKnown RBP6.38□□□□□ -1.39
SNRPA1-206ENST00000558059 NUDT15Q9NV35 164 aa6.38□□□□□ -1.39
SNRPA1-206ENST00000558059 GSKIPQ9P0R6 139 aa6.38□□□□□ -1.39
SNRPA1-206ENST00000558059 FBXL17Q9UF56 701 aa6.38□□□□□ -1.39
SNRPA1-206ENST00000558059 TBC1D24Q9ULP9 559 aa6.38□□□□□ -1.39
SNRPA1-206ENST00000558059 SLC45A2Q9UMX9 530 aa6.38□□□□□ -1.39
SNRPA1-206ENST00000558059 C7orf66A4D0T2 115 aa6.37□□□□□ -1.39
SNRPA1-206ENST00000558059 NUPR2A6NF83 97 aa6.37□□□□□ -1.39
SNRPA1-206ENST00000558059 ZNF98A6NK75 572 aa6.37□□□□□ -1.39
SNRPA1-206ENST00000558059 ZNF705EA8MWA4 302 aaPredicted RBP6.37□□□□□ -1.39
SNRPA1-206ENST00000558059 CCSO14618 274 aa6.37□□□□□ -1.39
SNRPA1-206ENST00000558059 DEFB4AO15263 64 aa6.37□□□□□ -1.39
SNRPA1-206ENST00000558059 TSC22D2O75157 780 aa6.37□□□□□ -1.39
SNRPA1-206ENST00000558059 JTBO76095 146 aa6.37□□□□□ -1.39
SNRPA1-206ENST00000558059 SCGB1D2O95969 90 aa6.37□□□□□ -1.39
SNRPA1-206ENST00000558059 METTL15P1P0C7V9 234 aa6.37□□□□□ -1.39
SNRPA1-206ENST00000558059 RBMY1A1P0DJD3 496 aaKnown RBP6.37□□□□□ -1.39
SNRPA1-206ENST00000558059 RBMY1CP0DJD4 496 aa6.37□□□□□ -1.39
SNRPA1-206ENST00000558059 HLA-DRB4P13762 266 aa6.37□□□□□ -1.39
SNRPA1-206ENST00000558059 ORM2P19652 201 aa6.37□□□□□ -1.39
SNRPA1-206ENST00000558059 TAS2R30P59541 319 aa6.37□□□□□ -1.39
SNRPA1-206ENST00000558059 NANOS2P60321 138 aaKnown RBP6.37□□□□□ -1.39
SNRPA1-206ENST00000558059 DLK1P80370 383 aa6.37□□□□□ -1.39
SNRPA1-206ENST00000558059 ARL16Q0P5N6 197 aa6.37□□□□□ -1.39
SNRPA1-206ENST00000558059 RBMY1FQ15415 496 aaKnown RBP6.37□□□□□ -1.39
SNRPA1-206ENST00000558059 GDF5OSQ5U4N7 250 aa6.37□□□□□ -1.39
SNRPA1-206ENST00000558059 CYP2G1PQ6ZSU1 146 aa6.37□□□□□ -1.39
SNRPA1-206ENST00000558059 Q8NAQ8 132 aa6.37□□□□□ -1.39
SNRPA1-206ENST00000558059 ZNF431Q8TF32 576 aaPredicted RBP6.37□□□□□ -1.39
SNRPA1-206ENST00000558059 PHLDA1Q8WV24 401 aaPredicted RBP6.37□□□□□ -1.39
SNRPA1-206ENST00000558059 PPP1R14BQ96C90 147 aa6.37□□□□□ -1.39
SNRPA1-206ENST00000558059 SLC25A32Q9H2D1 315 aa6.37□□□□□ -1.39
SNRPA1-206ENST00000558059 CLEC5AQ9NY25 188 aa6.37□□□□□ -1.39
SNRPA1-206ENST00000558059 HLA-DRB4X5D2U9 266 aa6.37□□□□□ -1.39
SNRPA1-206ENST00000558059 X6R8D5 127 aa6.37□□□□□ -1.39
SNRPA1-206ENST00000558059 FAM240BA0A1B0GVZ2 78 aa6.36□□□□□ -1.39
SNRPA1-206ENST00000558059 SMCO3A2RU48 225 aa6.36□□□□□ -1.39
SNRPA1-206ENST00000558059 FNDC10F2Z333 226 aa6.36□□□□□ -1.39
SNRPA1-206ENST00000558059 ISLRO14498 428 aa6.36□□□□□ -1.39
SNRPA1-206ENST00000558059 ID1P41134 155 aa6.36□□□□□ -1.39
SNRPA1-206ENST00000558059 PSMB3P49720 205 aa6.36□□□□□ -1.39
SNRPA1-206ENST00000558059 PLP1P60201 277 aa6.36□□□□□ -1.39
SNRPA1-206ENST00000558059 RRAS2P62070 204 aaPredicted RBP6.36□□□□□ -1.39
SNRPA1-206ENST00000558059 ASAH1Q13510 395 aa6.36□□□□□ -1.39
SNRPA1-206ENST00000558059 C12orf45Q8N5I9 185 aaPredicted RBP6.36□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms