RNA–Protein interactions for RNA: ENST00000557933.5

LDLR-205, Transcript of low density lipoprotein receptor, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene LDLR, Length 2,941 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLR-205ENST00000557933 P01737 135 aa9.9□□□□□ -0.82
LDLR-205ENST00000557933 LYZP61626 148 aa9.9□□□□□ -0.82
LDLR-205ENST00000557933 TM4SF20Q53R12 229 aa9.9□□□□□ -0.82
LDLR-205ENST00000557933 C2orf83Q53S99 150 aa9.9□□□□□ -0.82
LDLR-205ENST00000557933 FAM120AOSQ5T036 256 aa9.9□□□□□ -0.82
LDLR-205ENST00000557933 GOLT1AQ6ZVE7 132 aa9.9□□□□□ -0.82
LDLR-205ENST00000557933 GRAMD2BQ96HH9 432 aa9.9□□□□□ -0.82
LDLR-205ENST00000557933 RPUSD1Q9UJJ7 312 aaKnown RBP9.9□□□□□ -0.82
LDLR-205ENST00000557933 DLL1O00548 723 aa9.9□□□□□ -0.82
LDLR-205ENST00000557933 CHEK1O14757 476 aa9.9□□□□□ -0.82
LDLR-205ENST00000557933 NCR2O95944 276 aa9.9□□□□□ -0.82
LDLR-205ENST00000557933 SLC25A48Q6ZT89 311 aaKnown RBP9.9□□□□□ -0.82
LDLR-205ENST00000557933 OR1L8Q8NGR8 309 aa9.9□□□□□ -0.82
LDLR-205ENST00000557933 TMUB1Q9BVT8 246 aa9.9□□□□□ -0.82
LDLR-205ENST00000557933 NDUFA4L2Q9NRX3 87 aa9.9□□□□□ -0.82
LDLR-205ENST00000557933 EPDR1Q9UM22 224 aa9.9□□□□□ -0.82
LDLR-205ENST00000557933 APOA2P02652 100 aa9.89□□□□□ -0.83
LDLR-205ENST00000557933 NBEAP1P0C6P0 100 aa9.89□□□□□ -0.83
LDLR-205ENST00000557933 MUC15Q8N387 334 aa9.89□□□□□ -0.83
LDLR-205ENST00000557933 PPIAL4DF5H284 164 aa9.89□□□□□ -0.83
LDLR-205ENST00000557933 SYS1-DBNDD2H3BUS1 97 aa9.89□□□□□ -0.83
LDLR-205ENST00000557933 LHBP01229 141 aa9.89□□□□□ -0.83
LDLR-205ENST00000557933 COL8A1P27658 744 aa9.89□□□□□ -0.83
LDLR-205ENST00000557933 HBBP68871 147 aa9.89□□□□□ -0.83
LDLR-205ENST00000557933 GUSBP1Q15486 140 aa9.89□□□□□ -0.83
LDLR-205ENST00000557933 WFDC8Q8IUA0 241 aa9.89□□□□□ -0.83
LDLR-205ENST00000557933 ORAOV1Q8WV07 137 aa9.89□□□□□ -0.83
LDLR-205ENST00000557933 HILPDAQ9Y5L2 63 aa9.89□□□□□ -0.83
LDLR-205ENST00000557933 IGF2RP11717 2491 aa9.89□□□□□ -0.83
LDLR-205ENST00000557933 LYNX1G3V0Z9 82 aa9.89□□□□□ -0.83
LDLR-205ENST00000557933 K7EM74 188 aa9.89□□□□□ -0.83
LDLR-205ENST00000557933 LYNX1P0DP58 116 aa9.89□□□□□ -0.83
LDLR-205ENST00000557933 HIST1H1EP10412 219 aaKnown RBP9.89□□□□□ -0.83
LDLR-205ENST00000557933 LOXL1Q08397 574 aaPredicted RBP9.89□□□□□ -0.83
LDLR-205ENST00000557933 DAZAP1Q96EP5 407 aaKnown RBP9.89□□□□□ -0.83
LDLR-205ENST00000557933 PPP1R14DQ9NXH3 145 aa9.89□□□□□ -0.83
LDLR-205ENST00000557933 OR8A1Q8NGG7 326 aa9.88□□□□□ -0.83
LDLR-205ENST00000557933 SARAFQ96BY9 339 aa9.88□□□□□ -0.83
LDLR-205ENST00000557933 CHODLQ9H9P2 273 aa9.88□□□□□ -0.83
LDLR-205ENST00000557933 TCRBV4S1A1TA0A5B7 111 aa9.88□□□□□ -0.83
LDLR-205ENST00000557933 K7EMI3 77 aa9.88□□□□□ -0.83
LDLR-205ENST00000557933 M0R3E3 92 aa9.88□□□□□ -0.83
LDLR-205ENST00000557933 TMEM200BQ69YZ2 307 aa9.88□□□□□ -0.83
LDLR-205ENST00000557933 PRSS57Q6UWY2 283 aa9.88□□□□□ -0.83
LDLR-205ENST00000557933 BCL6BQ8N143 479 aaPredicted RBP9.88□□□□□ -0.83
LDLR-205ENST00000557933 Q9H3A6 140 aa9.88□□□□□ -0.83
LDLR-205ENST00000557933 RPP21Q9H633 154 aaKnown RBP9.88□□□□□ -0.83
LDLR-205ENST00000557933 PLSCR4Q9NRQ2 329 aa9.88□□□□□ -0.83
LDLR-205ENST00000557933 MSRB2Q9Y3D2 182 aa9.88□□□□□ -0.83
LDLR-205ENST00000557933 IGHV1-69-2A0A0G2JMI3 117 aa9.87□□□□□ -0.83
LDLR-205ENST00000557933 TAX1BP3O14907 124 aa9.87□□□□□ -0.83
LDLR-205ENST00000557933 ARMS2P0C7Q2 107 aa9.87□□□□□ -0.83
LDLR-205ENST00000557933 HTR1DP28221 377 aa9.87□□□□□ -0.83
LDLR-205ENST00000557933 MRPL27Q9P0M9 148 aaKnown RBP9.87□□□□□ -0.83
LDLR-205ENST00000557933 TRAV8-6A0A0B4J262 113 aa9.87□□□□□ -0.83
LDLR-205ENST00000557933 IGHV3-35A0A0C4DH35 117 aa9.87□□□□□ -0.83
LDLR-205ENST00000557933 SERTM2A0A1B0GWG4 89 aa9.87□□□□□ -0.83
LDLR-205ENST00000557933 RBP4P02753 201 aa9.87□□□□□ -0.83
LDLR-205ENST00000557933 BPIFB3P59826 476 aa9.87□□□□□ -0.83
LDLR-205ENST00000557933 KLF17Q5JT82 389 aaPredicted RBP9.87□□□□□ -0.83
LDLR-205ENST00000557933 SRSF12Q8WXF0 261 aaKnown RBP9.87□□□□□ -0.83
LDLR-205ENST00000557933 RAB37Q96AX2 223 aa9.87□□□□□ -0.83
LDLR-205ENST00000557933 C7orf69Q9H7B7 122 aa9.87□□□□□ -0.83
LDLR-205ENST00000557933 SAP30O75446 220 aa9.86□□□□□ -0.83
LDLR-205ENST00000557933 CFHR2P36980 270 aa9.86□□□□□ -0.83
LDLR-205ENST00000557933 IGFL4Q6B9Z1 124 aa9.86□□□□□ -0.83
LDLR-205ENST00000557933 IGFL3Q6UXB1 125 aa9.86□□□□□ -0.83
LDLR-205ENST00000557933 ZNF788Q6ZQV5 615 aa9.86□□□□□ -0.83
LDLR-205ENST00000557933 PNKDQ8N490 385 aa9.86□□□□□ -0.83
LDLR-205ENST00000557933 GPR82Q96P67 336 aa9.86□□□□□ -0.83
LDLR-205ENST00000557933 MRPS16Q9Y3D3 137 aaKnown RBP9.86□□□□□ -0.83
LDLR-205ENST00000557933 MUC6Q6W4X9 2439 aa9.86□□□□□ -0.83
LDLR-205ENST00000557933 CUL9Q8IWT3 2517 aa9.86□□□□□ -0.83
LDLR-205ENST00000557933 FSTL3O95633 263 aa9.86□□□□□ -0.83
LDLR-205ENST00000557933 GLRXP35754 106 aa9.86□□□□□ -0.83
LDLR-205ENST00000557933 RIPPLY3P57055 190 aa9.86□□□□□ -0.83
LDLR-205ENST00000557933 CR1LQ2VPA4 569 aa9.86□□□□□ -0.83
LDLR-205ENST00000557933 BVES-AS1Q5T3Y7 98 aa9.86□□□□□ -0.83
LDLR-205ENST00000557933 ADTRPQ96IZ2 230 aa9.86□□□□□ -0.83
LDLR-205ENST00000557933 IGHV2-70DA0A0C4DH43 119 aa9.86□□□□□ -0.83
LDLR-205ENST00000557933 IGHG3P01860 377 aa9.86□□□□□ -0.83
LDLR-205ENST00000557933 COX7A1P24310 79 aa9.86□□□□□ -0.83
LDLR-205ENST00000557933 SLC25A34Q6PIV7 304 aa9.86□□□□□ -0.83
LDLR-205ENST00000557933 ZNF714Q96N38 554 aa9.86□□□□□ -0.83
LDLR-205ENST00000557933 SMKR1H3BMG3 65 aa9.85□□□□□ -0.83
LDLR-205ENST00000557933 APOHP02749 345 aaPredicted RBP9.85□□□□□ -0.83
LDLR-205ENST00000557933 MRPL52Q86TS9 123 aaKnown RBP9.85□□□□□ -0.83
LDLR-205ENST00000557933 FAM222BQ8WU58 562 aa9.85□□□□□ -0.83
LDLR-205ENST00000557933 FAM215AQ9Y5M1 114 aa9.85□□□□□ -0.83
LDLR-205ENST00000557933 A0A1B0GXF2 115 aa9.85□□□□□ -0.83
LDLR-205ENST00000557933 TCRAP04437 139 aa9.85□□□□□ -0.83
LDLR-205ENST00000557933 PSG9Q00887 426 aa9.85□□□□□ -0.83
LDLR-205ENST00000557933 CHRDL1Q9BU40 450 aa9.85□□□□□ -0.83
LDLR-205ENST00000557933 MRPL32Q9BYC8 188 aaKnown RBP9.85□□□□□ -0.83
LDLR-205ENST00000557933 TTTY13Q9BZ97 58 aa9.85□□□□□ -0.83
LDLR-205ENST00000557933 HSBP1L1C9JCN9 74 aa9.84□□□□□ -0.83
LDLR-205ENST00000557933 CRYABP02511 175 aaKnown RBP9.84□□□□□ -0.83
LDLR-205ENST00000557933 MZT1Q08AG7 82 aa9.84□□□□□ -0.83
LDLR-205ENST00000557933 F11RQ9Y624 299 aaKnown RBP9.84□□□□□ -0.83
LDLR-205ENST00000557933 K7EP13 123 aa9.84□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms