RNA–Protein interactions for RNA: ENST00000557782.1

TDP1-217, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 318 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-217ENST00000557782 RNASE11Q8TAA1 199 aaKnown RBP2.13□□□□□ -2.07
TDP1-217ENST00000557782 BAIAP2Q9UQB8 552 aa2.13□□□□□ -2.07
TDP1-217ENST00000557782 HIGD1AQ9Y241 93 aa2.13□□□□□ -2.07
TDP1-217ENST00000557782 RNF11Q9Y3C5 154 aa2.13□□□□□ -2.07
TDP1-217ENST00000557782 OVOS2A0A0G2JMS6 1433 aa2.13□□□□□ -2.07
TDP1-217ENST00000557782 ARHGEF28Q8N1W1 1705 aaKnown RBP2.13□□□□□ -2.07
TDP1-217ENST00000557782 FER1L6Q2WGJ9 1857 aa2.13□□□□□ -2.07
TDP1-217ENST00000557782 TOP2BQ02880 1626 aa2.13□□□□□ -2.07
TDP1-217ENST00000557782 MED23Q9ULK4 1368 aa2.12□□□□□ -2.07
TDP1-217ENST00000557782 NOTCH3Q9UM47 2321 aa2.12□□□□□ -2.07
TDP1-217ENST00000557782 TRAPPC8Q9Y2L5 1435 aa2.12□□□□□ -2.07
TDP1-217ENST00000557782 NCOA3Q9Y6Q9 1424 aa2.12□□□□□ -2.07
TDP1-217ENST00000557782 OR51F1A6NGY5 319 aa2.12□□□□□ -2.07
TDP1-217ENST00000557782 RFPL4AA6NLU0 287 aa2.12□□□□□ -2.07
TDP1-217ENST00000557782 RFPL4AL1F8VTS6 287 aa2.12□□□□□ -2.07
TDP1-217ENST00000557782 TRGC1P0CF51 173 aa2.12□□□□□ -2.07
TDP1-217ENST00000557782 MPC1LP0DKB6 136 aa2.12□□□□□ -2.07
TDP1-217ENST00000557782 P0DMU3 169 aa2.12□□□□□ -2.07
TDP1-217ENST00000557782 FAM231AP0DMU4 169 aa2.12□□□□□ -2.07
TDP1-217ENST00000557782 FAM231CP0DMU5 169 aa2.12□□□□□ -2.07
TDP1-217ENST00000557782 TMEM258P61165 79 aa2.12□□□□□ -2.07
TDP1-217ENST00000557782 DYNLT1P63172 113 aa2.12□□□□□ -2.07
TDP1-217ENST00000557782 RELAQ04206 551 aa2.12□□□□□ -2.07
TDP1-217ENST00000557782 LCE3CQ5T5A8 94 aa2.12□□□□□ -2.07
TDP1-217ENST00000557782 C4orf22Q6V702 233 aa2.12□□□□□ -2.07
TDP1-217ENST00000557782 LINC00305Q7Z4B0 112 aa2.12□□□□□ -2.07
TDP1-217ENST00000557782 AQP3Q92482 292 aa2.12□□□□□ -2.07
TDP1-217ENST00000557782 RIMBP3CA6NJZ7 1639 aa2.12□□□□□ -2.07
TDP1-217ENST00000557782 RIMBP3BA6NNM3 1639 aa2.12□□□□□ -2.07
TDP1-217ENST00000557782 RIMBP3Q9UFD9 1639 aa2.12□□□□□ -2.07
TDP1-217ENST00000557782 A2MP01023 1474 aa2.12□□□□□ -2.07
TDP1-217ENST00000557782 ERCC6Q03468 1493 aa2.12□□□□□ -2.07
TDP1-217ENST00000557782 CEP164Q9UPV0 1460 aa2.12□□□□□ -2.07
TDP1-217ENST00000557782 PIK3C2AO00443 1686 aa2.12□□□□□ -2.07
TDP1-217ENST00000557782 ERICH3Q5RHP9 1530 aa2.12□□□□□ -2.07
TDP1-217ENST00000557782 KIAA2026Q5HYC2 2103 aa2.11□□□□□ -2.07
TDP1-217ENST00000557782 IGKV2-24A0A0C4DH68 120 aa2.11□□□□□ -2.07
TDP1-217ENST00000557782 TRBV7-6A0A0J9YX20 115 aa2.11□□□□□ -2.07
TDP1-217ENST00000557782 HMSDA8MTL9 139 aa2.11□□□□□ -2.07
TDP1-217ENST00000557782 A8MWV9 139 aa2.11□□□□□ -2.07
TDP1-217ENST00000557782 J3QQQ9 107 aa2.11□□□□□ -2.07
TDP1-217ENST00000557782 SULT1C4O75897 302 aa2.11□□□□□ -2.07
TDP1-217ENST00000557782 CRYGAP11844 174 aa2.11□□□□□ -2.07
TDP1-217ENST00000557782 AQP4P55087 323 aa2.11□□□□□ -2.07
TDP1-217ENST00000557782 SPCS2Q15005 226 aa2.11□□□□□ -2.07
TDP1-217ENST00000557782 IGFL1Q6UW32 110 aa2.11□□□□□ -2.07
TDP1-217ENST00000557782 SOSTDC1Q6X4U4 206 aa2.11□□□□□ -2.07
TDP1-217ENST00000557782 OR4X2Q8NGF9 303 aa2.11□□□□□ -2.07
TDP1-217ENST00000557782 OR51A4Q8NGJ6 313 aa2.11□□□□□ -2.07
TDP1-217ENST00000557782 OR4K15Q8NH41 348 aa2.11□□□□□ -2.07
TDP1-217ENST00000557782 AP1S3Q96PC3 154 aa2.11□□□□□ -2.07
TDP1-217ENST00000557782 VPS25Q9BRG1 176 aa2.11□□□□□ -2.07
TDP1-217ENST00000557782 Q9BRP9 147 aa2.11□□□□□ -2.07
TDP1-217ENST00000557782 LINC00467Q9BRT7 94 aa2.11□□□□□ -2.07
TDP1-217ENST00000557782 BCL2L10Q9HD36 194 aa2.11□□□□□ -2.07
TDP1-217ENST00000557782 FANCMQ8IYD8 2048 aa2.11□□□□□ -2.07
TDP1-217ENST00000557782 SHROOM3Q8TF72 1996 aa2.1□□□□□ -2.07
TDP1-217ENST00000557782 VPS8Q8N3P4 1428 aa2.1□□□□□ -2.07
TDP1-217ENST00000557782 SBF1O95248 1867 aa2.1□□□□□ -2.07
TDP1-217ENST00000557782 MYO5AQ9Y4I1 1855 aaKnown RBP2.1□□□□□ -2.07
TDP1-217ENST00000557782 CTTNBP2Q8WZ74 1663 aa2.1□□□□□ -2.07
TDP1-217ENST00000557782 TRAV13-1A0A0B4J241 112 aa2.1□□□□□ -2.07
TDP1-217ENST00000557782 MUC21A0A0G2JKD1 596 aa2.1□□□□□ -2.07
TDP1-217ENST00000557782 LOC107984640A0A0U1RRK4 108 aa2.1□□□□□ -2.07
TDP1-217ENST00000557782 MUC21A0A140T8X8 626 aa2.1□□□□□ -2.07
TDP1-217ENST00000557782 A0A1B0GVG6 124 aa2.1□□□□□ -2.07
TDP1-217ENST00000557782 A0A1B0GVY2 172 aa2.1□□□□□ -2.07
TDP1-217ENST00000557782 TIMM17BO60830 172 aa2.1□□□□□ -2.07
TDP1-217ENST00000557782 PAEPP09466 180 aa2.1□□□□□ -2.07
TDP1-217ENST00000557782 ZNF705BP0CI00 300 aaPredicted RBP2.1□□□□□ -2.07
TDP1-217ENST00000557782 EVI2AP22794 236 aa2.1□□□□□ -2.07
TDP1-217ENST00000557782 LINC00471Q8N535 108 aa2.1□□□□□ -2.07
TDP1-217ENST00000557782 C3orf56Q8N813 242 aa2.1□□□□□ -2.07
TDP1-217ENST00000557782 MAGOHBQ96A72 148 aaKnown RBP2.1□□□□□ -2.07
TDP1-217ENST00000557782 CALML5Q9NZT1 146 aa2.1□□□□□ -2.07
TDP1-217ENST00000557782 POLR1AO95602 1720 aaPredicted RBP2.1□□□□□ -2.07
TDP1-217ENST00000557782 LRRIQ1Q96JM4 1722 aa2.1□□□□□ -2.07
TDP1-217ENST00000557782 CLIP1P30622 1438 aa2.09□□□□□ -2.07
TDP1-217ENST00000557782 SCAF11Q99590 1463 aaKnown RBP2.09□□□□□ -2.07
TDP1-217ENST00000557782 RAPGEF2Q9Y4G8 1499 aa2.09□□□□□ -2.07
TDP1-217ENST00000557782 CCDC88CQ9P219 2028 aa2.09□□□□□ -2.07
TDP1-217ENST00000557782 MAPKBP1O60336 1514 aa2.09□□□□□ -2.07
TDP1-217ENST00000557782 IGLV10-54A0A075B6I4 117 aa2.09□□□□□ -2.07
TDP1-217ENST00000557782 TMSB15BA0A087X1C1 80 aa2.09□□□□□ -2.07
TDP1-217ENST00000557782 A0A1B0GW64 132 aa2.09□□□□□ -2.07
TDP1-217ENST00000557782 C5orf58C9J3I9 102 aa2.09□□□□□ -2.07
TDP1-217ENST00000557782 H3BMG7 143 aa2.09□□□□□ -2.07
TDP1-217ENST00000557782 K7ERJ3 54 aa2.09□□□□□ -2.07
TDP1-217ENST00000557782 M0R2Z0 102 aa2.09□□□□□ -2.07
TDP1-217ENST00000557782 RER1O15258 196 aa2.09□□□□□ -2.07
TDP1-217ENST00000557782 PMP2P02689 132 aa2.09□□□□□ -2.07
TDP1-217ENST00000557782 CLPSP04118 112 aa2.09□□□□□ -2.07
TDP1-217ENST00000557782 HIST1H1AQ02539 215 aaPredicted RBP2.09□□□□□ -2.07
TDP1-217ENST00000557782 NNATQ16517 81 aa2.09□□□□□ -2.07
TDP1-217ENST00000557782 ZNF791Q3KP31 576 aaPredicted RBP2.09□□□□□ -2.07
TDP1-217ENST00000557782 RPL13AP3Q6NVV1 102 aa2.09□□□□□ -2.07
TDP1-217ENST00000557782 Q6ZQT0 140 aa2.09□□□□□ -2.07
TDP1-217ENST00000557782 LRRC28Q86X40 367 aaPredicted RBP2.09□□□□□ -2.07
TDP1-217ENST00000557782 LRRC18Q8N456 261 aa2.09□□□□□ -2.07
TDP1-217ENST00000557782 TSTD1Q8NFU3 115 aa2.09□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms