RNA–Protein interactions for RNA: ENST00000557548.1

TRAV28-201, Transcript of T cell receptor alpha variable 28 (pseudogene), humanhuman

BASIC

Gene TRAV28, Length 323 nt, Biotype TR V pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV28-201ENST00000557548 PLXNB3Q9ULL4 1909 aa1.87□□□□□ -2.11
TRAV28-201ENST00000557548 MYH11P35749 1972 aa1.87□□□□□ -2.11
TRAV28-201ENST00000557548 SIPA1L3O60292 1781 aaPredicted RBP1.86□□□□□ -2.11
TRAV28-201ENST00000557548 SCN11AQ9UI33 1791 aa1.86□□□□□ -2.11
TRAV28-201ENST00000557548 UQCRHLA0A096LP55 91 aa1.86□□□□□ -2.11
TRAV28-201ENST00000557548 A0A1B0GW64 132 aa1.86□□□□□ -2.11
TRAV28-201ENST00000557548 DHRS12A0PJE2 317 aa1.86□□□□□ -2.11
TRAV28-201ENST00000557548 IRGMA1A4Y4 181 aa1.86□□□□□ -2.11
TRAV28-201ENST00000557548 A6NED7 52 aa1.86□□□□□ -2.11
TRAV28-201ENST00000557548 ARRDC5A6NEK1 342 aa1.86□□□□□ -2.11
TRAV28-201ENST00000557548 TLCD2A6NGC4 264 aa1.86□□□□□ -2.11
TRAV28-201ENST00000557548 A8MUU9 505 aa1.86□□□□□ -2.11
TRAV28-201ENST00000557548 A8MWP4 228 aa1.86□□□□□ -2.11
TRAV28-201ENST00000557548 GABARAPH6UMI1 98 aa1.86□□□□□ -2.11
TRAV28-201ENST00000557548 H7BYZ3 331 aa1.86□□□□□ -2.11
TRAV28-201ENST00000557548 J3QQQ9 107 aa1.86□□□□□ -2.11
TRAV28-201ENST00000557548 IGKV1D-33P01593 117 aa1.86□□□□□ -2.11
TRAV28-201ENST00000557548 IGKV1-33P01594 117 aa1.86□□□□□ -2.11
TRAV28-201ENST00000557548 TRGC2P03986 189 aa1.86□□□□□ -2.11
TRAV28-201ENST00000557548 IGLV7-43P04211 117 aa1.86□□□□□ -2.11
TRAV28-201ENST00000557548 UQCRHP07919 91 aa1.86□□□□□ -2.11
TRAV28-201ENST00000557548 SRP19P09132 144 aaKnown RBP1.86□□□□□ -2.11
TRAV28-201ENST00000557548 ZNF286BP0CG31 522 aa1.86□□□□□ -2.11
TRAV28-201ENST00000557548 P0DMU3 169 aa1.86□□□□□ -2.11
TRAV28-201ENST00000557548 FAM231AP0DMU4 169 aa1.86□□□□□ -2.11
TRAV28-201ENST00000557548 FAM231CP0DMU5 169 aa1.86□□□□□ -2.11
TRAV28-201ENST00000557548 AZU1P20160 251 aa1.86□□□□□ -2.11
TRAV28-201ENST00000557548 FGF7P21781 194 aa1.86□□□□□ -2.11
TRAV28-201ENST00000557548 ATP6V0CP27449 155 aa1.86□□□□□ -2.11
TRAV28-201ENST00000557548 CASP1P29466 404 aa1.86□□□□□ -2.11
TRAV28-201ENST00000557548 GUCA1AP43080 201 aaPredicted RBP1.86□□□□□ -2.11
TRAV28-201ENST00000557548 DAPP51397 102 aa1.86□□□□□ -2.11
TRAV28-201ENST00000557548 PKIAP61925 76 aa1.86□□□□□ -2.11
TRAV28-201ENST00000557548 RELAQ04206 551 aa1.86□□□□□ -2.11
TRAV28-201ENST00000557548 SLC38A11Q08AI6 406 aa1.86□□□□□ -2.11
TRAV28-201ENST00000557548 MOBPQ13875 183 aa1.86□□□□□ -2.11
TRAV28-201ENST00000557548 PDGFRLQ15198 375 aa1.86□□□□□ -2.11
TRAV28-201ENST00000557548 GLYATL3Q5SZD4 288 aa1.86□□□□□ -2.11
TRAV28-201ENST00000557548 C16orf47Q6ZP98 133 aaPredicted RBP1.86□□□□□ -2.11
TRAV28-201ENST00000557548 DEFB132Q7Z7B7 95 aa1.86□□□□□ -2.11
TRAV28-201ENST00000557548 C10orf126Q8N4M7 172 aa1.86□□□□□ -2.11
TRAV28-201ENST00000557548 MMGT1Q8N4V1 131 aa1.86□□□□□ -2.11
TRAV28-201ENST00000557548 ACBD7Q8N6N7 88 aa1.86□□□□□ -2.11
TRAV28-201ENST00000557548 TCTEX1D1Q8N7M0 179 aa1.86□□□□□ -2.11
TRAV28-201ENST00000557548 APCDD1LQ8NCL9 501 aa1.86□□□□□ -2.11
TRAV28-201ENST00000557548 OR11G2Q8NGC1 345 aa1.86□□□□□ -2.11
TRAV28-201ENST00000557548 OR51A4Q8NGJ6 313 aa1.86□□□□□ -2.11
TRAV28-201ENST00000557548 OR4C16Q8NGL9 310 aa1.86□□□□□ -2.11
TRAV28-201ENST00000557548 RPS4Y2Q8TD47 263 aa1.86□□□□□ -2.11
TRAV28-201ENST00000557548 CMBLQ96DG6 245 aa1.86□□□□□ -2.11
TRAV28-201ENST00000557548 GPX7Q96SL4 187 aaPredicted RBP1.86□□□□□ -2.11
TRAV28-201ENST00000557548 B9D2Q9BPU9 175 aa1.86□□□□□ -2.11
TRAV28-201ENST00000557548 AICDAQ9GZX7 198 aa1.86□□□□□ -2.11
TRAV28-201ENST00000557548 FAIMQ9NVQ4 179 aa1.86□□□□□ -2.11
TRAV28-201ENST00000557548 CKLFQ9UBR5 152 aa1.86□□□□□ -2.11
TRAV28-201ENST00000557548 ZFP30Q9Y2G7 519 aa1.86□□□□□ -2.11
TRAV28-201ENST00000557548 MRPS16Q9Y3D3 137 aaKnown RBP1.86□□□□□ -2.11
TRAV28-201ENST00000557548 ICOSQ9Y6W8 199 aa1.86□□□□□ -2.11
TRAV28-201ENST00000557548 FOCADQ5VW36 1801 aa1.86□□□□□ -2.11
TRAV28-201ENST00000557548 UTRNP46939 3433 aa1.86□□□□□ -2.11
TRAV28-201ENST00000557548 TULP4Q9NRJ4 1543 aa1.86□□□□□ -2.11
TRAV28-201ENST00000557548 TJP1Q07157 1748 aa1.86□□□□□ -2.11
TRAV28-201ENST00000557548 TIAM2Q8IVF5 1701 aa1.86□□□□□ -2.11
TRAV28-201ENST00000557548 LAMB2P55268 1798 aa1.85□□□□□ -2.11
TRAV28-201ENST00000557548 ARFGEF2Q9Y6D5 1785 aa1.85□□□□□ -2.11
TRAV28-201ENST00000557548 RRBP1Q9P2E9 1410 aaKnown RBP1.85□□□□□ -2.11
TRAV28-201ENST00000557548 SVILO95425 2214 aa1.85□□□□□ -2.11
TRAV28-201ENST00000557548 IGKV2-28A0A075B6P5 120 aa1.85□□□□□ -2.11
TRAV28-201ENST00000557548 IGKV1OR2-108A0A075B7D4 117 aa1.85□□□□□ -2.11
TRAV28-201ENST00000557548 IGHV3OR16-8A0A075B7F1 116 aa1.85□□□□□ -2.11
TRAV28-201ENST00000557548 TRAV40A0A0B4J280 105 aa1.85□□□□□ -2.11
TRAV28-201ENST00000557548 IGKV1-12A0A0C4DH73 117 aa1.85□□□□□ -2.11
TRAV28-201ENST00000557548 A0A1B0GVG6 124 aa1.85□□□□□ -2.11
TRAV28-201ENST00000557548 A0A1B0GW54 56 aa1.85□□□□□ -2.11
TRAV28-201ENST00000557548 RPL36A-HNRNPH2H7BZ11 118 aa1.85□□□□□ -2.11
TRAV28-201ENST00000557548 M0R143 59 aa1.85□□□□□ -2.11
TRAV28-201ENST00000557548 PLA2G10O15496 165 aa1.85□□□□□ -2.11
TRAV28-201ENST00000557548 NCR2O95944 276 aa1.85□□□□□ -2.11
TRAV28-201ENST00000557548 IGKV1D-12P01611 117 aa1.85□□□□□ -2.11
TRAV28-201ENST00000557548 IGKV2D-28P01615 120 aa1.85□□□□□ -2.11
TRAV28-201ENST00000557548 APODP05090 189 aa1.85□□□□□ -2.11
TRAV28-201ENST00000557548 GPX1P07203 203 aa1.85□□□□□ -2.11
TRAV28-201ENST00000557548 PAEPP09466 180 aa1.85□□□□□ -2.11
TRAV28-201ENST00000557548 HIST1H2BOP23527 126 aa1.85□□□□□ -2.11
TRAV28-201ENST00000557548 NFYBP25208 207 aa1.85□□□□□ -2.11
TRAV28-201ENST00000557548 HIST1H2BBP33778 126 aa1.85□□□□□ -2.11
TRAV28-201ENST00000557548 GNG4P50150 75 aa1.85□□□□□ -2.11
TRAV28-201ENST00000557548 NDUFA6P56556 154 aa1.85□□□□□ -2.11
TRAV28-201ENST00000557548 HIST1H2BDP58876 126 aa1.85□□□□□ -2.11
TRAV28-201ENST00000557548 TAS2R45P59539 299 aa1.85□□□□□ -2.11
TRAV28-201ENST00000557548 KRTAP10-3P60369 221 aa1.85□□□□□ -2.11
TRAV28-201ENST00000557548 HIST1H2BCP62807 126 aa1.85□□□□□ -2.11
TRAV28-201ENST00000557548 MSMO1Q15800 293 aa1.85□□□□□ -2.11
TRAV28-201ENST00000557548 HIST2H2BEQ16778 126 aa1.85□□□□□ -2.11
TRAV28-201ENST00000557548 HIST2H2BFQ5QNW6 126 aaPredicted RBP1.85□□□□□ -2.11
TRAV28-201ENST00000557548 LDLRAD2Q5SZI1 272 aa1.85□□□□□ -2.11
TRAV28-201ENST00000557548 KPRPQ5T749 579 aaPredicted RBP1.85□□□□□ -2.11
TRAV28-201ENST00000557548 BCL2L15Q5TBC7 163 aa1.85□□□□□ -2.11
TRAV28-201ENST00000557548 RPL22L1Q6P5R6 122 aaKnown RBP1.85□□□□□ -2.11
TRAV28-201ENST00000557548 TEX261Q6UWH6 196 aa1.85□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms